mRNA_H-canaliculatus_F_contig11707.1519.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI) HSP 1 Score: 219 bits (559), Expect = 3.500e-68 Identity = 128/233 (54.94%), Postives = 144/233 (61.80%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSR-------------RNSYNRSSS----------------------------------------------ISNFVYGSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAP--TVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGNLPAMFLWSAY+AVQF AYEQLR TDFL SR R S SSS ++NF YG++AAFTAT++TYPLDITRTALAFQGVPKRY S+S F+ T RESG RGLFRG TPTL MI+PQMG+SFAVWEA+K AP G G+GA+P T+ WQL AG VAGMV KL+VFPLDTVKKRVQ Sbjct: 85 RGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSVSGGGVRHRGSICPSSSPPHERRGAGRVGKVGGGWRTGGREGESPCQARRRQQDGRGRGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQ 317
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE) HSP 1 Score: 215 bits (548), Expect = 7.170e-66 Identity = 126/231 (54.55%), Postives = 146/231 (63.20%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSRRNS--------YNRSS-------------------------------------------------SISNFVYGSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAP--TVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGNLPAMFLW+AY+AVQF AYEQLR TDFL SR+++ Y SS +++NFVYG++AAFTATL+TYPLDITRTALAFQGVPKRY S+S F+ T RESG RGLFRG TPTL MI+PQMG+SFAVWEA+ AP G G+GA+P T+ WQL AG VAGMV KL+VFPLDTVKKRVQ Sbjct: 103 RGNLPAMFLWAAYTAVQFSAYEQLRATDFLLSRQHNSVSGGGVRYRGSSCPSSSSPHERRGAGRVGEVGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALTGGAPR-AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQ 332
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA) HSP 1 Score: 136 bits (343), Expect = 3.410e-36 Identity = 78/173 (45.09%), Postives = 107/173 (61.85%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLN-SRRNSYNRSSSISNFVYGSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGN AM LW AY+AVQF Y +R D L+ SR ++Y R F+ G+ AA AT TYPLD+ RTA A QGVP+R+ ++ F ++TL +G RG + G++ LV ++PQMGI+F +EA+K+ P G W AG AG++SK +V+PLDT+KKRVQ Sbjct: 75 RGNPAAMALWIAYTAVQFGLYPLVR--DALSASRASAYARPRQTDKFLAGAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDHPPQALAAAPGL----ATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQ 241
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A8K1CPW8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPW8_PYTOL) HSP 1 Score: 130 bits (327), Expect = 8.610e-34 Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTT---DFLNSRRNSYNRSSSISNFVYGSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGNL A LW +YSAVQF AY L+T D N+ S++ + V G+ A AT++TYPLD+ RT A QGVPK++ ++ SHTL G G + G+ PTL I+P MG+SF ++ A+ + S V VL + GA AG+VSKLMV+PLDTVKKR+Q Sbjct: 75 RGNLAATGLWISYSAVQFGAYGGLKTLWPPDIA-------NQHSTLVSSVNGATAGVLATVVTYPLDLFRTIFASQGVPKQFPTLQSLASHTLETRGVVGFYNGLGPTLCQIAPYMGLSFGIYAALNDLTASSGV--------HWVLSYVGTGATAGLVSKLMVYPLDTVKKRMQ 234
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.740e-33 Identity = 71/177 (40.11%), Postives = 108/177 (61.02%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSRRNSYNRSSSI-----SNFVYGSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RG+ AM LW +YS VQF Y R + RR ++ +S+ F+ G+ A AT TYP D+ RTA A QGVP++++++ F++ TLR G RGL+ G+TP ++ ++PQ+GI+F +EAM+++ P+ GA W AG AG+VSK+ V+P+DT+KKR+Q Sbjct: 88 RGSPAAMMLWVSYSGVQFGVYPVFRRL-LMRWRRWAHQEEASLFLQQRDRFLAGAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVPAALRALPAVGA----WWPAAAGFTAGLVSKIAVYPVDTLKKRMQ 259
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: T0RP14_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RP14_SAPDV) HSP 1 Score: 127 bits (318), Expect = 4.100e-33 Identity = 69/176 (39.20%), Postives = 105/176 (59.66%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSRRNSYNRSSSISNFVY----GSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGN+ A LW +Y+A+QF Y+ L+ N+ R ++V+ G++A AT+ TYPLD+ RT LA QGVPK + ++ F SH GPRG F+G++PT++ I+P MG+SF ++ + + + + VL + GA+AG VSKL+V+PLDT+KKR+Q Sbjct: 67 RGNVAATGLWVSYAAIQFACYQSLQ---------NAIVRHDHTLSWVWYSGSGAIAGVVATVATYPLDLCRTVLASQGVPKVFPNMRSFASHMYATQGPRGFFQGLSPTVLQIAPYMGLSFGIYSTLADLSTTH-----------PVLHAVGNGAIAGFVSKLIVYPLDTIKKRMQ 222
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A067CVE4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVE4_SAPPC) HSP 1 Score: 129 bits (323), Expect = 5.610e-33 Identity = 71/176 (40.34%), Postives = 105/176 (59.66%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSRRNSYNRSSSISNFVY----GSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGN+ A LW +Y+A+QF Y+ L+ NS R ++V+ G++A AT+ TYPLD+ RT LA QGVPK + ++ F SH GPRG F+G++PT++ I+P MG+SF ++ + + + + VL + GA+AG VSKL+V+PLDTVKKR+Q Sbjct: 113 RGNVAATGLWVSYAAIQFACYQALQ---------NSVVRHDHTLSWVWYSGSGAIAGVVATVATYPLDLCRTVLASQGVPKVFPNMRSFASHMYANQGPRGFFQGLSPTVLQIAPYMGLSFGIYSTLADLSTTH-----------PVLHAIGNGAIAGFVSKLIVYPLDTVKKRMQ 268
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A1W0A5C7_9STRA (Mitochondrial Carrier (MC) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5C7_9STRA) HSP 1 Score: 123 bits (308), Expect = 3.580e-31 Identity = 69/172 (40.12%), Postives = 100/172 (58.14%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSRRNSYNRSSSISNFVYGSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGN+ A LW +YS +QF Y+ L+ T N ++ S I G++A AT+ TYPLD+ RT LA QGVPK + ++ F SH G +G F+G++PT+ I+P MGISF ++ + + + +L + GAVAG +SKL+V+PLDTVKKR+Q Sbjct: 66 RGNVAATGLWVSYSGIQFGCYQALQNTI-----TNHDHKLSWIWYSGSGAIAGVVATMATYPLDLCRTVLASQGVPKAFPTMHAFASHIYTTQGLKGFFQGLSPTIFQIAPYMGISFGIYSTLSDISSKH-----------PILQAIGNGAVAGFMSKLIVYPLDTVKKRMQ 221
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A1V9Z980_9STRA (Mitochondrial Carrier (MC) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z980_9STRA) HSP 1 Score: 123 bits (308), Expect = 4.520e-31 Identity = 69/175 (39.43%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSRRNSYNRSSSISNFVY---GSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPSMCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGN+ A LW +YSA+QF Y+ L+ + + S+S Y G++A AT++TYPLD+ RT LA QGVPK + ++ F SH G RG F+G++PT++ I+P MG+SF ++ + + + + +L + GA+AG VSKL+V+PLDTVKKR+Q Sbjct: 71 RGNVAATGLWVSYSAIQFGCYQALQNSIV--------HHDHSLSWIWYSGSGAVAGVLATVVTYPLDLCRTVLASQGVPKAFPTMRHFASHMYATQGVRGFFQGLSPTVLQIAPYMGLSFGIYSTLADLSTNH-----------PILQAVGNGAIAGFVSKLLVYPLDTVKKRMQ 226
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Match: A0A0W8DTB4_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DTB4_PHYNI) HSP 1 Score: 124 bits (310), Expect = 5.620e-31 Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 1 RGNLPAMFLWSAYSAVQFCAYEQLRTTDFLNSRRNSYNRSSSISNFVYGSLAAFTATLLTYPLDITRTALAFQGVPKRYQSVSGFMSHTLRESGPRGLFRGVTPTLVMISPQMGISFAVWEAMKNSAPS-------------MCVVGVGAGAAPTVLWQLWAGAVAGMVSKLMVFPLDTVKKRVQ 516 RGNL A LW YSA+QF +Y +L + N +S+ V G+ A TAT++TYPLD+ RTA A QG+PKR+ ++ + HT G RG + G+ T+ I+P MG+SF+++ A+ + + M V T L + +GAVAG+VSKL V+PLDTVKKR+Q Sbjct: 89 RGNLAASGLWVGYSALQFASYRELTRCWERSGNNTDLNVPASVIAAVNGAAAGVTATVVTYPLDLFRTAFASQGMPKRFPTMRSLVLHTWTTQGIRGFYSGLGATVFQIAPYMGLSFSIYSALSDLSEKHRNKQEDREANAWMPVT--------TALSYVGSGAVAGLVSKLAVYPLDTVKKRMQ 265 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11707.1519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11707.1519.1 >prot_H-canaliculatus_F_contig11707.1519.1 ID=prot_H-canaliculatus_F_contig11707.1519.1|Name=mRNA_H-canaliculatus_F_contig11707.1519.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=166bp MFLWSAYSAVQFCAYEQLRTTDFLNSRRNSYNRSSSISNFVYGSLAAFTAback to top mRNA from alignment at H-canaliculatus_F_contig11707:1957..2935- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11707.1519.1 ID=mRNA_H-canaliculatus_F_contig11707.1519.1|Name=mRNA_H-canaliculatus_F_contig11707.1519.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=979bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11707:1957..2935- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11707:1957..2935- >mRNA_H-canaliculatus_F_contig11707.1519.1 ID=mRNA_H-canaliculatus_F_contig11707.1519.1|Name=mRNA_H-canaliculatus_F_contig11707.1519.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=996bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11707:1957..2935- (Hapterophycus canaliculatus Oshoro5f female)back to top |