mRNA_H-canaliculatus_F_contig117.1506.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig117.1506.1
Unique NamemRNA_H-canaliculatus_F_contig117.1506.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: D8LQJ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ9_ECTSI)

HSP 1 Score: 493 bits (1268), Expect = 5.010e-170
Identity = 271/417 (64.99%), Postives = 318/417 (76.26%), Query Frame = 1
Query:    1 KKAPGEEENSEALEGVDEILCRLAQAHPTQMPKRWELITQKLNRAMRKKRISTEPMKTIFAEEGLCIPQSWVAEKAQADKEKALARAAKAAEKVKPVSGMMTLFGKKKKA---------DHEELKTESSAGVDDSDEAGEADTESESDDEEGSATDVGLVVEEGAESGYRYRPLSKYEVFSCMRGVHDRAGADLVATEDAVDKMESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARKLDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFSAKNLIEIRRKAGSMRVGAICVSASIAAVDDDKWGLLAVEKIITSWGSTKLYIHEKLAA 1224
            +K    EE SEA EGV+++LCRLAQ HPTQ P+RWELITQKLNRAMR K+IS +PMK IFA+EGLCIPQ WVAEKAQA+K++ALARA KAAEK +   G + LFG              D ++     + G   +DEA E DTE+ESD  E  A D     E G  S Y+Y+ LSKYEVFS MR VHDRAGA +++TE+AV+ M  A+ MVD LYE LP Q LKEISQQNRI ASL Q+   YGEI +  FLKVMVKLKRIHG+MMS GGSFWDLG+GVGK VIAAAMMHN+ESCYGVECLEDLRAA+RP L+RWRK E  KL   K+ IRVDFI ADA+KQ GW+AEATLLFV+TNFSAK++IEI+ KA  M++GAI +S S+AAV++DKWGLLAVE+I TSWGS  LYIHEKLAA
Sbjct:   49 QKGAQSEETSEAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAMRNKKISAQPMKDIFAKEGLCIPQCWVAEKAQAEKDRALARAQKAAEKKEGALGRI-LFGXXXXXXXXXXXXXXDRKKTGEGQAVGEVTADEANETDTETESD--ENVADDPAAGTEGGQASVYKYKALSKYEVFSFMRRVHDRAGAAMISTEEAVEDMRKAKKMVDTLYEHLPVQTLKEISQQNRINASLMQDSVAYGEIDISHFLKVMVKLKRIHGNMMSVGGSFWDLGSGVGKCVIAAAMMHNWESCYGVECLEDLRAAARPTLERWRKEEVPKLHSVKANIRVDFINADAMKQKGWVAEATLLFVHTNFSAKDIIEIKTKADGMKIGAIALSVSLAAVNEDKWGLLAVEQIKTSWGSANLYIHEKLAA 462          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: A0A6H5KZ72_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ72_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 1.500e-142
Identity = 238/389 (61.18%), Postives = 283/389 (72.75%), Query Frame = 1
Query:    4 KAPGEEENSEALEGVDEILCRLAQAHPTQMPKRWELITQKLNRAMRKKRISTEPMKTIFAEEGLCIPQSWVAEKAQADKEKALARAAKAAEKVKPVSGMMTLFGKKKK-------ADHEELKTESSAGVDDSDEAGEADTESESDDEEGSATDVGLVVEEGAESGYRYRPLSKYEVFSCMRGVHDRAGADLVATEDAVDKMESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFE--------------SCYGVECLEDLRAASRPILDRWRKYEARKLDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFSAKNLIEIRRKAGSMRVGAI 1107
            K    EE  +A EGV+++LCRLAQ HPTQ P+RWELITQKLNRAMR K+IS +PMK IFA+EGLCIPQ WVAEK QA+K++ALAR  K+AEK K   G  TLFGK+K        +D        + G   +DEA EADTE+ESD++     D      EG  S Y+Y+ LSKYEVFS MR VHDRAGA ++ TE+AV+ M  A+ MVDMLYE LP Q +KEISQQNRI A+L Q+   YGEI +  FLKVMVKLKRIHG+MMSAGGSFWDLG+GVGK VIAAAMMHN+E              SCYGVECLEDLRAA+RP L+RWRK E  KL+  K+KIRVDFI ADA+ Q GW+AEATLLFV+TNFSAK++IEI+ KA  M+V  +
Sbjct:   29 KGAQSEETPDAFEGVEDVLCRLAQTHPTQTPERWELITQKLNRAMRNKKISAQPMKDIFAKEGLCIPQCWVAEKTQAEKDRALARGQKSAEKKKGALGR-TLFGKQKTVAAAVAGSDRNRTGEAQAVGEVKADEANEADTETESDED---VADHPAARTEGGASVYKYKALSKYEVFSFMRRVHDRAGAAIIETEEAVEDMREAKKMVDMLYEHLPVQTVKEISQQNRINANLMQDSVAYGEIDISHFLKVMVKLKRIHGNMMSAGGSFWDLGSGVGKCVIAAAMMHNWEPITSFSHICFQRKKSCYGVECLEDLRAAARPTLERWRKEEVLKLNSVKAKIRVDFINADAMNQKGWVAEATLLFVHTNFSAKDIIEIKTKADGMKVRTV 413          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: A0A3F2RRL3_9STRA (DOT1 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRL3_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.460e-26
Identity = 70/213 (32.86%), Postives = 113/213 (53.05%), Query Frame = 1
Query:  583 MESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARKLDGSKSKIRVDFIFADALKQPGWMAEATLLFVN-TNFSAKNLIEIRRKAGSMRVGAICVSASIAAVDDDKWGLLAVEKIITSWGSTKLYIHEKL 1218
            +E      D L+ + P   +K++S+  R K  L     VYGEI       +   ++   G ++  GG+F+DLG+G GK+V+AAA++H+F  C G+E L+ L A +  +LDRWR      L  +K+ + V F   DA+K P    +ATL+F N T FS   L  I  +A  + VG   V+ +   ++  +W  +  EK + SWG   + + +K+
Sbjct:  304 VEDVERCHDELFTEFPEPEVKKVSRLEREKKELANRSLVYGEIPFTTVDAIFQLMRTKFGVLLDKGGNFYDLGSGCGKVVMAAALLHDFSKCCGIEVLDGLHALALKVLDRWRYQMLDSLPATKADVDVGFAKGDAVKCPDVWRDATLVFCNSTCFSDSLLQAISTEADQLAVGTYFVTVT-KPLESTRWQAMHEEKFLMSWGRATVIVQKKM 515          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: D0NRI2_PHYIT (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NRI2_PHYIT)

HSP 1 Score: 113 bits (282), Expect = 1.180e-25
Identity = 74/216 (34.26%), Postives = 110/216 (50.93%), Query Frame = 1
Query:  583 MESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARK--LDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFSAKNLIEI--RRKAGSMRVGAICVSASIAAVDDDKWGLLAVEKIIT-SWGSTKLYIHEK 1215
            M S  ++ + LY + P Q  K+ S++ R          VYGEI    F  V+  LKR H  +   GGSF D+G+G GK V AAA++H+F++CYG+E LE L   S+ +L RW K       L   K + R+ F   DAL    W A   L+F+N+    + L+    R+ A S + GAI ++A+    D   + +L    +   +WG    Y+H K
Sbjct:    1 MASLSHIFETLYLEHPLQVSKKASREERRDREFISMSLVYGEIAFEPFKVVLDVLKRWHHVLNKPGGSFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHCISQEVLQRWEKIIKPNFALSMQKKRTRISFTQGDALAAD-WPANVDLVFLNSTCFGERLMYAFARKLALSCKPGAIVITATHKLPDTQNFSVLRQLTVTQEAWGDATWYLHRK 215          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: A0A6A3YS23_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YS23_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.570e-25
Identity = 72/218 (33.03%), Postives = 114/218 (52.29%), Query Frame = 1
Query:  577 DKMESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARK--LDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFSAKNLIEI--RRKAGSMRVGAICVSASIAAVDDDKWGLLAVEKIIT-SWGSTKLYIHEK 1215
            + M +   + + LY++ P Q  K+ S++ R +        VYGEI    F  V+  LKR H  +   GG+F D+G+G GK V AAA++H+F++CYG+E LE L A S+ +L RW K+      L   K + R+ F+  DAL    W A   L+F+N+    + L+    R+ A S + GAI ++A+    D   +  L    +   +WG    Y+H +
Sbjct:   67 ETMAAMTQIFETLYQEHPLQVAKKASREERREREYISMSLVYGEIAFVPFKVVLDVLKRWHHVLKKPGGTFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHAISQEVLGRWEKFIKPNFALSMQKKRTRITFVQGDALVVD-WPAHVDLVFLNSTCFGERLMHALARKLAQSCKSGAIVITATHKLPDAQNFVELRQLTVTQEAWGDATWYLHRR 283          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: D0NBI9_PHYIT (DOT1 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NBI9_PHYIT)

HSP 1 Score: 110 bits (274), Expect = 2.860e-24
Identity = 71/235 (30.21%), Postives = 116/235 (49.36%), Query Frame = 1
Query:  547 ADLVATEDAVDKMESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLV----------IAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARKLDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFSAKNLIE-IRRKAGSMRVGAICVSASIAAVDDDKWGLLAVEKIITSWGSTKLYIHEKL 1218
            A+       V  +E A      L+ + P   +K++S   R K  L     VYGEI       +   ++   G ++  GGSF+D+G+G GK+V          +AAA++H+F  C GVE L+ L A +  +LDRWR      L  +K  + V F+  DA+K+P    +ATL+F N+   + +LI+ I  +A  + VG+  V+ +   +   +W  +  EK   SWG   +   +K+
Sbjct:    6 AEAAVISTGVTAVEDAAKRHAELFVEFPELEVKKVSSLEREKKELANRSLVYGEIPFETVDAIFQLMRTQFGVLLDKGGSFYDIGSGCGKVVRVGYWFAGEVMAAALLHDFSKCCGVEVLDGLHAVALKVLDRWRFEMLDSLPATKVDVDVGFVKGDAVKRPDIWRDATLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLLST-RWQAMHEEKFHMSWGRATVIFQKKM 239          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: G5A5C7_PHYSP (DOT1 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=G5A5C7_PHYSP)

HSP 1 Score: 109 bits (273), Expect = 4.150e-24
Identity = 66/215 (30.70%), Postives = 113/215 (52.56%), Query Frame = 1
Query:  613 LYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLV------------IAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARKLDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFSAKNLIE-IRRKAGSMRVGAICVSASIAAVDDDKWGLLAVEKIITSWGSTKLYIHEKL 1218
            L+ + P   +K++S+  R K  L     VYGEI       +   ++   G ++  GG+F+D+G+G GK+V            +AAA++H+F  C G+E L+ L A +  +LDRWR      L  +K+ + + F  ADA+K+P    +ATL+F N+   + +LI+ I  +A  + VG+  V+ +   +   +W  +  EK   SWG   + I +K+
Sbjct:   28 LFAEFPEPEVKKVSRLEREKKELANRSLVYGEIPFETVDAIFQLMRTQFGVLLDKGGNFYDIGSGCGKVVRAGNVLTVEWQVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRYQMLDSLPATKADLDLGFAKADAVKRPDIWRDATLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVT-KPLQSTRWQAVHEEKFHMSWGRATVIIQKKM 241          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: A0A3F2RZC6_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZC6_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.570e-23
Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  577 DKMESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASRPILDRWRKY--EARKLDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFSAKNLIEI--RRKAGSMRVGAICVSASIAAVDDDKWGLL 1158
            + M +     + LY++ P Q  K+ S++ R +        VYGEI    F  V+  LKR H  +   GG F D+G+G GK V AAA++H+F++CYG+E LE L A S+ +L RW K+      L   K + RV F   DAL    W A A L+F+N+    + L+    R+ A   + GAI ++A+    D   + +L
Sbjct:   68 ETMAAMTQTFEALYQEHPLQVAKQASREERREREFISMSLVYGEIAFVPFKVVLDVLKRWHHVLKKPGGVFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHAISQQVLQRWEKHIKPTFALSMQKKRTRVSFTLGDALTVD-WPANADLIFLNSTCFEERLMHALARKLAQCCKFGAIVITATHKIPDTHSFEVL 264          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: A0A329SJB0_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SJB0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.210e-23
Identity = 73/218 (33.49%), Postives = 108/218 (49.54%), Query Frame = 1
Query:  577 DKMESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARK--LDGSKSKIRVDFIFADALKQPGWMAEATLLFVN-TNFSAKNLIEIRRK-AGSMRVGAICVSASIAAVDDDKWGLLAVEKIIT-SWGSTKLYIHEK 1215
            D M +   + + LY + P QA K+ S++ R          VYGEI    F  V+  LKR H  +   GG+F D+G+G GK V AAA++H+F++CYG+E LE L   S+ +  RW K       L   K + R+ F   DAL    W     L+F+N T F  + +  + RK A   + GAI ++A+    D   +  L    +   +WG    Y+H K
Sbjct:   60 DTMATLTQIFETLYLEHPLQASKKASREERRDREFISMSLVYGEIAFEPFKVVLDVLKRWHHALNKPGGTFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHLISQEVFQRWEKIIKPNFALSMQKKRTRISFTQGDALVVD-WPVNVDLVFLNSTCFGERLMYALARKLAQCCKPGAIVITATHKLPDTQNFAQLRQLTVTQEAWGDATWYLHRK 276          
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Match: H3GN58_PHYRM (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GN58_PHYRM)

HSP 1 Score: 107 bits (268), Expect = 4.080e-23
Identity = 73/218 (33.49%), Postives = 110/218 (50.46%), Query Frame = 1
Query:  577 DKMESARNMVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLKRIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASRPILDRWRKYEARKLDGS--KSKIRVDFIFADALKQPGWMAEATLLFVN-TNFSAKNLIEIRRK-AGSMRVGAICVSASIAAVDDDKWGLLAVEKIIT-SWGSTKLYIHEK 1215
            + M S   + + LY++ P Q  K+ S++ R +        VYGEI    F  V+  LKR H  ++  GG F D+G+G GK V AAA++H+F++CYG+E LE L A S  +L RW          S  K + R+ F   DAL    W A   L+F+N T F  + +  + RK A   + GAI ++A+    D   +  L    +   +WG    Y+H +
Sbjct:   56 ETMASLTQIFETLYQEHPLQVAKKTSREERREREFISMSLVYGEIAFVPFKVVVDVLKRWHHVLIKPGGVFLDIGSGSGKAVFAAALLHDFDACYGIEVLEGLHAISHEVLQRWESIIKPNFSLSLQKKRTRISFTQGDALAVD-WPANIDLVFLNSTCFGERLMYALARKLAQCCKAGAIVITATHKLPDTQNFVELRQLTVTQEAWGDATWYLHRR 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig117.1506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQJ9_ECTSI5.010e-17064.99DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KZ72_9PHAE1.500e-14261.18DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A3F2RRL3_9STRA3.460e-2632.86DOT1 domain-containing protein n=3 Tax=Phytophthor... [more]
D0NRI2_PHYIT1.180e-2534.26Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6A3YS23_9STRA5.570e-2533.03Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
D0NBI9_PHYIT2.860e-2430.21DOT1 domain-containing protein n=1 Tax=Phytophthor... [more]
G5A5C7_PHYSP4.150e-2430.70DOT1 domain-containing protein n=14 Tax=Phytophtho... [more]
A0A3F2RZC6_9STRA2.570e-2334.85Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A329SJB0_9STRA3.210e-2333.49Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
H3GN58_PHYRM4.080e-2333.49Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig117contigH-canaliculatus_F_contig117:14610..17446 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score500.0
Seed ortholog evalue1.1e-138
Seed eggNOG ortholog2880.D8LQJ9
EggNOG free text desc.Histone methylation protein DOT1
EggNOG OGs2BR00@1,2STQA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1227
Cds size1227
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig117.1506.1prot_H-canaliculatus_F_contig117.1506.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig117 14610..17446 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928863.4516857-CDS-H-canaliculatus_F_contig117:14609..147411622928863.4516857-CDS-H-canaliculatus_F_contig117:14609..14741Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 14610..14741 -
1696845593.4813144-CDS-H-canaliculatus_F_contig117:14609..147411696845593.4813144-CDS-H-canaliculatus_F_contig117:14609..14741Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 14610..14741 -
1622928863.468731-CDS-H-canaliculatus_F_contig117:15474..156301622928863.468731-CDS-H-canaliculatus_F_contig117:15474..15630Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 15475..15630 -
1696845593.4925852-CDS-H-canaliculatus_F_contig117:15474..156301696845593.4925852-CDS-H-canaliculatus_F_contig117:15474..15630Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 15475..15630 -
1622928863.483171-CDS-H-canaliculatus_F_contig117:15845..159321622928863.483171-CDS-H-canaliculatus_F_contig117:15845..15932Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 15846..15932 -
1696845593.501434-CDS-H-canaliculatus_F_contig117:15845..159321696845593.501434-CDS-H-canaliculatus_F_contig117:15845..15932Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 15846..15932 -
1622928863.4947991-CDS-H-canaliculatus_F_contig117:16203..163231622928863.4947991-CDS-H-canaliculatus_F_contig117:16203..16323Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 16204..16323 -
1696845593.5095286-CDS-H-canaliculatus_F_contig117:16203..163231696845593.5095286-CDS-H-canaliculatus_F_contig117:16203..16323Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 16204..16323 -
1622928863.510581-CDS-H-canaliculatus_F_contig117:16714..174461622928863.510581-CDS-H-canaliculatus_F_contig117:16714..17446Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 16715..17446 -
1696845593.5176883-CDS-H-canaliculatus_F_contig117:16714..174461696845593.5176883-CDS-H-canaliculatus_F_contig117:16714..17446Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 16715..17446 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig117.1506.1

>prot_H-canaliculatus_F_contig117.1506.1 ID=prot_H-canaliculatus_F_contig117.1506.1|Name=mRNA_H-canaliculatus_F_contig117.1506.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=409bp
KKAPGEEENSEALEGVDEILCRLAQAHPTQMPKRWELITQKLNRAMRKKR
ISTEPMKTIFAEEGLCIPQSWVAEKAQADKEKALARAAKAAEKVKPVSGM
MTLFGKKKKADHEELKTESSAGVDDSDEAGEADTESESDDEEGSATDVGL
VVEEGAESGYRYRPLSKYEVFSCMRGVHDRAGADLVATEDAVDKMESARN
MVDMLYEKLPAQALKEISQQNRIKASLKQERFVYGEIHVHEFLKVMVKLK
RIHGHMMSAGGSFWDLGAGVGKLVIAAAMMHNFESCYGVECLEDLRAASR
PILDRWRKYEARKLDGSKSKIRVDFIFADALKQPGWMAEATLLFVNTNFS
AKNLIEIRRKAGSMRVGAICVSASIAAVDDDKWGLLAVEKIITSWGSTKL
YIHEKLAA*
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mRNA from alignment at H-canaliculatus_F_contig117:14610..17446-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig117.1506.1 ID=mRNA_H-canaliculatus_F_contig117.1506.1|Name=mRNA_H-canaliculatus_F_contig117.1506.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2837bp|location=Sequence derived from alignment at H-canaliculatus_F_contig117:14610..17446- (Hapterophycus canaliculatus Oshoro5f female)
AAGAAGGCACCTGGCGAAGAAGAGAATTCCGAAGCGCTTGAAGGGGTAGA CGAAATCCTGTGTCGGCTCGCCCAGGCGCACCCGACCCAGATGCCAAAGC GGTGGGAGCTCATCACCCAAAAACTCAACCGCGCCATGAGAAAGAAAAGG ATATCTACCGAGCCAATGAAGACCATTTTCGCCGAGGAAGGCCTCTGCAT TCCGCAGAGCTGGGTGGCCGAAAAAGCGCAAGCTGATAAGGAGAAGGCGC TAGCGCGAGCCGCAAAGGCCGCGGAGAAGGTAAAACCCGTGTCAGGAATG ATGACTCTCTTCGGAAAGAAAAAGAAGGCTGATCACGAGGAGCTGAAGAC AGAATCTTCGGCTGGAGTGGACGACTCTGACGAGGCAGGCGAGGCCGACA CCGAATCGGAGTCTGACGATGAAGAAGGGAGTGCTACAGATGTCGGTCTC GTGGTGGAAGAAGGCGCAGAATCAGGGTATAGGTATCGACCTCTATCGAA GTACGAGGTATTCTCCTGTATGAGGGGAGTGCACGACCGAGCTGGCGCTG ATCTGGTTGCAACTGAAGATGCCGTCGACAAGATGGAGAGTGCGAGGAAC ATGGTTGACATGTTGTACGAGAAGCTGCCAGCCCAGGCATTGAAGGAAAT ATCGCAGCAGAACCGGATAAAAGCCAGCCTGAAGCAGGAACGATTTGTCT ACGGAGAGATACACGTTCATGAATTCTTGAAGGTGGCTAAAAAACAGAAG ATCACTTCGAGCGAGAATTCAAAGGGTCCACGCCTTTAATGCACATCGCC TGCGCTTTTAAGGTTCCTTTGTTCTCTTTCGCGACATGACTTCTAACTGG CAGCGCATGTCTCTCCGAAGCTGATCCTCAAACGTTCCACTAAAACGTGT AAAAGGGTTCGACAATTGTTTCATCTTAAGAGAGTAGCAGTTGTCCGAAT GACCCGTCTGCAAGGAGATCTATACCTTGTCAGGGAGGACTCTCAGACCG CGGGAAACTAGGAGCTCTTCTTTGAGAAAACCGAACCAAGACTGCAGTTA CTGCAACCTTATGCGATCGTTCATTGCACGTCTCAAAGTGAAACCGGATG TTTCGAATGGATGGTGCTTTCAGGTGATGGTGAAATTAAAGCGAATTCAT GGTCACATGATGTCCGCTGGTGGCAGCTTTTGGGACCTTGGCGCGGGCGT GGGGAAGTTAGTAATCGCTGCAGCGATGATGCACAATTTCGAGGTGAACC ATTTGTCACATAGGGGGCGGGGCGTTTTAGAGAAGATTTGCCAAGGTTTG TCCGACCGTTTTTAGATGGGCGTTCTCCTTAGCTTTCAACCCATATCGGG TACTCAAGTGCTCGAGAGGATGCGATTAGTCAATGATCCATGGTTGAGAA AAGAAAAGCGTTGTATGTCTCCATTTGTCGCTCATTAGGTCGTGACCCCG CCTATTGACACCCATGGCACGCCTGTTGTCTCGCCCTTTCTCCTGGCCAT CGCTCTCCACCAAGTCCTGCTACGGTGTGGAATGCCTCGAAGACTTGCGG GCAGCGTCGCGGCCCATACTAGATCGATGGAGAAAATATGAGGCAAGAAA GGTTTTGAAATGTATATGCTCTTAGATTCGGCAAATTAAAATTAATTCCA CGCAAGCGCTTGACTCACGAGCTTCCTAGGTCGCGTGCACTCATATCAAA CATTTTGCTGGTGTGAGATTTTGCACGACCAACAACCTTGTGAGACATAA TGGTCATCGAATACAAATGGCTTGTTGTGTGTCGGACGCACAAAATTTCA AGATTAGGTACCCAAGCTCGATGGAAGCAAGTCCAAAATTCGGGTTGACT TCATTTTTGCTGACGCGCTGAAGCAACCAGGCTGGATGGCCGAGGCGACC CTCCTTTTCGTGAACACCAACTTTTCGGCGAAGAACTTGATCGAGATTAG ACGAAAGGCGGGCAGTATGAGGGTGAGTGAAAAGTTCAAAGATGCCGTCC GACGCTGTTGTGGTCTTCTCCACAGATCGCATCTACTGTTGGACGTAGAG GCGTTGTGAGAAAAGAATAGATAAGGCAACTGGGTAACCGTTTCGCCTAC CTTCCTTCGTCATTTCGACCCACGCCGCGTTGAATAGGAGGGTAAAACAA CAGGAGAGGTAGAATCGTGTGCCATGGACACCTGTCTCAGTGCATAATTC TGCCGCAACAGCGAGGCATCACACACCTACAGAGGAAACGAGGGGAGGAG AGAGAGAGACAGAGATAGAGACAGATAGACGGACAGACAGACAGAGAAAC AGAGAGTGTTCCCGCGTTCGCAAAACGTTCGACTTTCATAAACACGAAAA TATAATGCTTTGGAAAGGGATCTCGCTCTTCGATAAGTTTGACGTTTTCC TGCCCACGGAAAACGGAGGACTCACAGGGTTTCGAACCTGGACAAGCAGT GTGCTCCAATGCCTCTTGTCTTGCGGCTGGCATGCAATCAGCAGAGCAGA GCGACCAAACTCTTCCCTTGACGAGGCCAAGAACATGGGAGAGCAGTCGG CGCCCCCTTCCGCAAGGATTTTTCTGACTTGACTCGACTCACTCGATGCA CTCCGCTACAAACCGCCGCATAAAAAGCCGACCACGCGGTGGGTGAAGGT TACCTAACCTACCGGTCTCCCCACTTGCTATGTTGGACCTGCTACCATAC TTCAGGTGGGAGCAATCTGCGTCTCCGCTTCTATTGCGGCGGTGGATGAC GATAAGTGGGGCTTACTGGCTGTAGAAAAAATAATAACTTCATGGGGATC GACGAAGCTTTACATACACGAGAAACTCGCGGCTTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig117:14610..17446-

>mRNA_H-canaliculatus_F_contig117.1506.1 ID=mRNA_H-canaliculatus_F_contig117.1506.1|Name=mRNA_H-canaliculatus_F_contig117.1506.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2454bp|location=Sequence derived from alignment at H-canaliculatus_F_contig117:14610..17446- (Hapterophycus canaliculatus Oshoro5f female)
AAGAAGGCACCTGGCGAAGAAGAGAATTCCGAAGCGCTTGAAGGGGTAGA
CGAAATCCTGTGTCGGCTCGCCCAGGCGCACCCGACCCAGATGCCAAAGC
GGTGGGAGCTCATCACCCAAAAACTCAACCGCGCCATGAGAAAGAAAAGG
ATATCTACCGAGCCAATGAAGACCATTTTCGCCGAGGAAGGCCTCTGCAT
TCCGCAGAGCTGGGTGGCCGAAAAAGCGCAAGCTGATAAGGAGAAGGCGC
TAGCGCGAGCCGCAAAGGCCGCGGAGAAGGTAAAACCCGTGTCAGGAATG
ATGACTCTCTTCGGAAAGAAAAAGAAGGCTGATCACGAGGAGCTGAAGAC
AGAATCTTCGGCTGGAGTGGACGACTCTGACGAGGCAGGCGAGGCCGACA
CCGAATCGGAGTCTGACGATGAAGAAGGGAGTGCTACAGATGTCGGTCTC
GTGGTGGAAGAAGGCGCAGAATCAGGGTATAGGTATCGACCTCTATCGAA
GTACGAGGTATTCTCCTGTATGAGGGGAGTGCACGACCGAGCTGGCGCTG
ATCTGGTTGCAACTGAAGATGCCGTCGACAAGATGGAGAGTGCGAGGAAC
ATGGTTGACATGTTGTACGAGAAGCTGCCAGCCCAGGCATTGAAGGAAAT
ATCGCAGCAGAACCGGATAAAAGCCAGCCTGAAGCAGGAACGATTTGTCT
ACGGAGAGATACACGTTCATGAATTCTTGAAGAAGAAGGCACCTGGCGAA
GAAGAGAATTCCGAAGCGCTTGAAGGGGTAGACGAAATCCTGTGTCGGCT
CGCCCAGGCGCACCCGACCCAGATGCCAAAGCGGTGGGAGCTCATCACCC
AAAAACTCAACCGCGCCATGAGAAAGAAAAGGATATCTACCGAGCCAATG
AAGACCATTTTCGCCGAGGAAGGCCTCTGCATTCCGCAGAGCTGGGTGGC
CGAAAAAGCGCAAGCTGATAAGGAGAAGGCGCTAGCGCGAGCCGCAAAGG
CCGCGGAGAAGGTAAAACCCGTGTCAGGAATGATGACTCTCTTCGGAAAG
AAAAAGAAGGCTGATCACGAGGAGCTGAAGACAGAATCTTCGGCTGGAGT
GGACGACTCTGACGAGGCAGGCGAGGCCGACACCGAATCGGAGTCTGACG
ATGAAGAAGGGAGTGCTACAGATGTCGGTCTCGTGGTGGAAGAAGGCGCA
GAATCAGGGTATAGGTATCGACCTCTATCGAAGTACGAGGTATTCTCCTG
TATGAGGGGAGTGCACGACCGAGCTGGCGCTGATCTGGTTGCAACTGAAG
ATGCCGTCGACAAGATGGAGAGTGCGAGGAACATGGTTGACATGTTGTAC
GAGAAGCTGCCAGCCCAGGCATTGAAGGAAATATCGCAGCAGAACCGGAT
AAAAGCCAGCCTGAAGCAGGAACGATTTGTCTACGGAGAGATACACGTTC
ATGAATTCTTGAAGGTGATGGTGAAATTAAAGCGAATTCATGGTCACATG
ATGTCCGCTGGTGGCAGCTTTTGGGACCTTGGCGCGGGCGTGGGGAAGTT
AGTAATCGCTGCAGCGATGATGCACAATTTCGAGGTGATGGTGAAATTAA
AGCGAATTCATGGTCACATGATGTCCGCTGGTGGCAGCTTTTGGGACCTT
GGCGCGGGCGTGGGGAAGTTAGTAATCGCTGCAGCGATGATGCACAATTT
CGAGTCCTGCTACGGTGTGGAATGCCTCGAAGACTTGCGGGCAGCGTCGC
GGCCCATACTAGATCGATGGAGAAAATATGAGGCAAGAAAGTCCTGCTAC
GGTGTGGAATGCCTCGAAGACTTGCGGGCAGCGTCGCGGCCCATACTAGA
TCGATGGAGAAAATATGAGGCAAGAAAGCTCGATGGAAGCAAGTCCAAAA
TTCGGGTTGACTTCATTTTTGCTGACGCGCTGAAGCAACCAGGCTGGATG
GCCGAGGCGACCCTCCTTTTCGTGAACACCAACTTTTCGGCGAAGAACTT
GATCGAGATTAGACGAAAGGCGGGCAGTATGAGGCTCGATGGAAGCAAGT
CCAAAATTCGGGTTGACTTCATTTTTGCTGACGCGCTGAAGCAACCAGGC
TGGATGGCCGAGGCGACCCTCCTTTTCGTGAACACCAACTTTTCGGCGAA
GAACTTGATCGAGATTAGACGAAAGGCGGGCAGTATGAGGGTGGGAGCAA
TCTGCGTCTCCGCTTCTATTGCGGCGGTGGATGACGATAAGTGGGGCTTA
CTGGCTGTAGAAAAAATAATAACTTCATGGGGATCGACGAAGCTTTACAT
ACACGAGAAACTCGCGGCTTGAGTGGGAGCAATCTGCGTCTCCGCTTCTA
TTGCGGCGGTGGATGACGATAAGTGGGGCTTACTGGCTGTAGAAAAAATA
ATAACTTCATGGGGATCGACGAAGCTTTACATACACGAGAAACTCGCGGC
TTGA
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