mRNA_H-canaliculatus_F_contig117.1504.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig117.1504.1
Unique NamemRNA_H-canaliculatus_F_contig117.1504.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: D8LQJ7_ECTSI (T-complex protein 1 subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQJ7_ECTSI)

HSP 1 Score: 837 bits (2163), Expect = 5.940e-303
Identity = 440/455 (96.70%), Postives = 449/455 (98.68%), Query Frame = 3 
Query:  156 MGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            MGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVM GYRLALKEAVKYIKANLCVPVDKLGRPNL+NAAKTAMSSKILGPES FFAEMAVDAVTAVRTES GD GKKVVKYPVSAVHILKCHGLSLLDS VEPGYALNCVRASQGMPTSV+NAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDD+CLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFD +VLG+A+EVSEQRVGDGELIFFKGTKTQASCT+VLRGANDFMLDEMDRALHD+LMVIKRMLESNVLVAGGG+VETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ
Sbjct:    1 MGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLINAAKTAMSSKILGPESDFFAEMAVDAVTAVRTESGGDLGKKVVKYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGQADEVSEQRVGDGELIFFKGTKTQASCTVVLRGANDFMLDEMDRALHDSLMVIKRMLESNVLVAGGGSVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 455
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: A0A835YVW9_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVW9_9STRA)

HSP 1 Score: 754 bits (1947), Expect = 4.530e-270
Identity = 392/454 (86.34%), Postives = 427/454 (94.05%), Query Frame = 3 
Query:  159 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            G+RT GQDVRTQNVTAATAIANIVK+SLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVE+A+LQDQEVGDGTTSVVI+AAELLKRANEL+KNNIHPT+VM+GYRLALKEAVKYIK+NLCVPVD LGRPNL+NAAKT+MSSKILGPES FF+ +AVDAVTAVR+ES G+ GK +VKYPVSAVHILKCHG S LDS +  GYALN  RA+QGMPT+V+ AKIA LD NLQR+KMQMGV+VVV D+KEVDAIRQREMDITKERIEKIL+SGA VVLT+KGIDD+CLKYFVEA AMAVRRVK ED+RRIAKATGA IV+TLADMEGNETFD  VLGEAEEVSE+RVGDGELIF KGT+TQASCT+VLRGAN++MLDEMDRALHD+LMVIKRMLE NVLVAGGGAVE ALSIYLE+FATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ
Sbjct:    4 GERTSGQDVRTQNVTAATAIANIVKTSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVEVAELQDQEVGDGTTSVVIIAAELLKRANELVKNNIHPTSVMSGYRLALKEAVKYIKSNLCVPVDTLGRPNLINAAKTSMSSKILGPESDFFSNLAVDAVTAVRSESTGEGGKTLVKYPVSAVHILKCHGQSSLDSQLIKGYALNATRAAQGMPTTVRGAKIALLDFNLQRHKMQMGVEVVVKDMKEVDAIRQREMDITKERIEKILASGANVVLTSKGIDDLCLKYFVEAKAMAVRRVKPEDLRRIAKATGAKIVSTLADMEGNETFDPAVLGEAEEVSEERVGDGELIFVKGTRTQASCTVVLRGANEYMLDEMDRALHDSLMVIKRMLEGNVLVAGGGAVEVALSIYLENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 457
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: A0A024TJ60_9STRA (T-complex protein 1 subunit alpha n=15 Tax=Eukaryota TaxID=2759 RepID=A0A024TJ60_9STRA)

HSP 1 Score: 669 bits (1727), Expect = 8.730e-237
Identity = 345/458 (75.33%), Postives = 400/458 (87.34%), Query Frame = 3 
Query:  147 LALMGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            L + G RT G+DVR QNVTAA AIANIVKSSLGPVGLDKMLVD +GDVTITNDGATILK L+VEHPA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL++N IHPT++++GYRLA++EAVKYIK +L VPVD LGR +LVNAAKT+MSSKI+GPES FFA + VDAVT+V+T  EG  GK V KYPVSA+++LK HG S L+S +  G+ALNC RASQ MPTSV+ AKIA LD +LQR+KMQMGVQ+VVND KE+D IRQRE+DITKERI+KIL +GA V+LTTKGIDD+C+KYFVEAG M VRR KKED+RRIAKATG  +V TLADM+G ETFDA  LG A EVSE+RVGDGELI+ KG   + + T+VLRGAN+ +LDEMDR+LHD+LMV+KRMLESN LVAGGGAVE+ALSIYLE++ATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+
Sbjct:    3 LVVDGKRTSGKDVREQNVTAALAIANIVKSSLGPVGLDKMLVDNIGDVTITNDGATILKMLEVEHPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVQNKIHPTSIISGYRLAMREAVKYIKEHLSVPVDSLGRTSLVNAAKTSMSSKIIGPESEFFANLVVDAVTSVKTTEEGAKGKVVTKYPVSAINVLKAHGKSALESQLVDGFALNCTRASQAMPTSVRPAKIALLDFDLQRHKMQMGVQMVVNDPKELDQIRQREVDITKERIQKILDAGANVILTTKGIDDLCMKYFVEAGCMGVRRCKKEDLRRIAKATGGQVVLTLADMDGGETFDAASLGTAAEVSEERVGDGELIYIKGCANRQATTVVLRGANEMLLDEMDRSLHDSLMVVKRMLESNQLVAGGGAVESALSIYLETYATTLGSREQLAIAEFADALLVIPKTLAVNAAK 460
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: A0A024G0Q1_9STRA (T-complex protein 1 subunit alpha n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G0Q1_9STRA)

HSP 1 Score: 663 bits (1711), Expect = 2.350e-234
Identity = 345/454 (75.99%), Postives = 391/454 (86.12%), Query Frame = 3 
Query:  159 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            G RT G+DVR  NVTAA A+ANIVKSSLGPVGLDKMLVD++GD+TITNDGATILKQL+VEHPAAKVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPT+++ GYRLA++EAVKY+K NL VPVD LGR  LVNAAKT+MSSKILGPES  FA M VDAVT+V+   EG  GK   +YPVSA+++LK HG S L+S +  G+ALNCVRASQGMPT VKNAKIA LD +LQRY+ QMGVQVVV D KE++ IRQRE+DITKE+I+KIL +GA V+LTTKGIDD+CLKYFVEA AM VRRVKKED+ RIA+ATG  +V TLADMEG ETFD   LGEAE VSE+RVGDGELI+ KG KT  + T+VLRGAN+ MLDEMDR LHDALMV+KRMLESN LVAGGGAVE ALSIYLE++A TL SREQLAI EFAEALL+IPKTLAVNAAQ
Sbjct:    8 GTRTSGKDVREHNVTAAIAVANIVKSSLGPVGLDKMLVDDIGDITITNDGATILKQLEVEHPAAKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYVKENLSVPVDSLGRSVLVNAAKTSMSSKILGPESELFANMVVDAVTSVKVMGEGSKGKMTARYPVSAINVLKAHGKSALESELVDGFALNCVRASQGMPTVVKNAKIALLDFDLQRYRNQMGVQVVVTDPKELEQIRQREIDITKEKIQKILDAGANVLLTTKGIDDLCLKYFVEAKAMGVRRVKKEDLVRIARATGGQVVLTLADMEGEETFDPANLGEAEVVSEERVGDGELIYIKGCKTSRATTLVLRGANENMLDEMDRTLHDALMVVKRMLESNQLVAGGGAVECALSIYLENYANTLSSREQLAIVEFAEALLIIPKTLAVNAAQ 461
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: A0A7S1TNK3_9STRA (T-complex protein 1 subunit alpha (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNK3_9STRA)

HSP 1 Score: 661 bits (1706), Expect = 9.120e-234
Identity = 337/458 (73.58%), Postives = 395/458 (86.24%), Query Frame = 3 
Query:  147 LALMGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            L + G+R+ G+DVRT NVTA  AIANIV+SSLGP GLDKMLVD +GDVTITNDGATILKQLDVEHPAAKVLVELADLQD EVGDGTTSV I+AAELL+RAN L+K  +HPTT+M+G R+ALKEAVKY+K NL VP D+LGR NL+NAAKT+MSSKI+GP+S FFA M VDAV  VRTE E  S +K  +YPVSA+HILKCHG S LDS +  G+ALN  RA+QGMPT V+NAK+A LD NLQR+KMQMGV VVVN+V+EV+ IRQREMDITKERI KI+ +GA V+LTTKGIDD+CLKYFVEAGA+A RRVK EDMRRIA+ATG  IVTTLAD+EGNE FD   LG AE V E+RVGDGEL++ +GT   A+CT+VLRGAN++MLDEMDRALHD+LMV+KRMLESN LVAGGGAVE ALS++LES+A ++ +REQ+AI+EF+EALLVIP+TLAVNAAQ
Sbjct:    3 LVIDGERSTGEDVRTSNVTAVMAIANIVRSSLGPTGLDKMLVDNIGDVTITNDGATILKQLDVEHPAAKVLVELADLQDSEVGDGTTSVTILAAELLRRANMLVKQGVHPTTIMSGMRMALKEAVKYVKENLVVPADELGRENLINAAKTSMSSKIIGPDSDFFANMVVDAVQMVRTEPEEGSARKRARYPVSAIHILKCHGRSALDSELVDGFALNTSRAAQGMPTFVENAKLALLDFNLQRHKMQMGVSVVVNEVREVEGIRQREMDITKERIRKIIDAGANVILTTKGIDDLCLKYFVEAGAIACRRVKMEDMRRIARATGGQIVTTLADLEGNENFDPANLGRAEIVREERVGDGELLYIRGTPRSAACTLVLRGANEYMLDEMDRALHDSLMVVKRMLESNALVAGGGAVEAALSMHLESYAMSVATREQMAISEFSEALLVIPRTLAVNAAQ 460
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: H3G982_PHYRM (T-complex protein 1 subunit alpha n=23 Tax=Oomycota TaxID=4762 RepID=H3G982_PHYRM)

HSP 1 Score: 661 bits (1705), Expect = 2.140e-233
Identity = 340/458 (74.24%), Postives = 397/458 (86.68%), Query Frame = 3 
Query:  147 LALMGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            L + G RT G+DVR  NVTAA AIANIVKSSLGPVGLDKMLVD++GDVTITNDGATILKQL+VE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPT+++ GYRLA++EAVKYIK NL VPVD LGR +LVNAAKT+MSSKILGPES FFA + VDAV++VR E EG  GK   KYPVS++++LK HG S L++ +  G+ALNC +ASQ MPT +KNAKIA LD +LQR++MQMGVQVVVND  E++ IRQRE+DITKE+I+K++ +GA V+LTTKGIDD+CLKYFVE+G M VRR KKED++RIAKATG  +V TLADMEG ETFD   LGEA+EV E+RVGDGELI+ KG KT+ + T+VLRGAN+ MLDEMDR++HDA MV+KRMLESN LVAGGGAVE ALSIYLE+FATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+
Sbjct:    6 LVVDGTRTSGKDVRELNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDTLGRESLVNAAKTSMSSKILGPESEFFANLVVDAVSSVRVEQEGAKGKVKAKYPVSSINVLKAHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVVVNDPNELELIRQREIDITKEKIQKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPLTLGEAQEVIEERVGDGELIYIKGCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAK 463
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: M4BE66_HYAAE (T-complex protein 1 subunit alpha n=8 Tax=Oomycota TaxID=4762 RepID=M4BE66_HYAAE)

HSP 1 Score: 661 bits (1705), Expect = 2.140e-233
Identity = 337/458 (73.58%), Postives = 397/458 (86.68%), Query Frame = 3 
Query:  147 LALMGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            L + G RT G+D+R QNVTAA AIANIVKSSLGPVGLDKMLVD++GDVTITNDGATILKQL+VE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPT+++ GYRLA++EAVKYIK NL VPVD +GR +LVNAAKT MSSKILGPES FFA + VDAV++++ E EG  GK   KYPVS++++LK HG S L++ +  G+ALNC +ASQ MPT +KNAKIA LD +LQR++MQMGVQV+VND  E++ IRQRE+DITKE+I K++ +GA V+LTTKGIDD+CLKYFVE+G M VRR KKED++RIAKATG  +V TLADMEG ETFD   LGEA+EV E+RVGDGELI+FKG KT+ + T+VLRGAN+ MLDEMDR++HDA MV+KRMLESN LVAGGGAVE ALSIYLE+FATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+
Sbjct:    6 LVVDGTRTSGKDIREQNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDSIGRESLVNAAKTCMSSKILGPESEFFANLVVDAVSSIKVEHEGAKGKVKAKYPVSSINVLKSHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVIVNDPNELEKIRQREVDITKEKIYKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPLTLGEAQEVCEERVGDGELIYFKGCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAK 463
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: A0A7S2BQP8_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BQP8_9STRA)

HSP 1 Score: 661 bits (1705), Expect = 2.460e-233
Identity = 349/462 (75.54%), Postives = 400/462 (86.58%), Query Frame = 3 
Query:  138 MSGLALM-GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            MSGLA++ G+RT GQDVR  NVTA  AIANIVKSSLGPVGLDKMLVD +GDVTITNDGATILK L+VEHPAAKVLVELADLQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPTTVM+GYRLA++EAVKYIK NL V  D+LG   L+NA +T+M+SKILGPES FFA MAV A+T+V+  S  + GK   +YPVSAVHILKCHG S L+S +  G+ALNC RASQ MPT +  AKIA LD +L+R+KMQMGVQVVVN+ KEV+ IRQRE DITKERIEKIL SGA V+LTTKGIDD+C+KYFVE G +A+RRVKKED++R+A+ATG ++V TLADMEGNETF+A  LG AE V E+RVGDGELI+ +G  TQ + T+VLRGAND+MLDEMDRALHD+L VIKR+LESN +VAGGGAVETALSIYL+ FATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ
Sbjct:    1 MSGLAMIDGERTTGQDVRMANVTACMAIANIVKSSLGPVGLDKMLVDAIGDVTITNDGATILKMLEVEHPAAKVLVELADLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTTVMSGYRLAMREAVKYIKNNLLVSADELGDDVLLNACRTSMASKILGPESDFFAAMAVKALTSVK--SVNNEGK--ARYPVSAVHILKCHGRSALESELVDGFALNCTRASQQMPTRIDGAKIALLDFDLKRHKMQMGVQVVVNEAKEVEGIRQREQDITKERIEKILESGANVILTTKGIDDLCMKYFVERGCIAIRRVKKEDIKRLARATGGTVVVTLADMEGNETFEASNLGTAETVQEERVGDGELIYLRGLPTQRAVTVVLRGANDYMLDEMDRALHDSLCVIKRVLESNSVVAGGGAVETALSIYLDDFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 458
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: A0A7S2UZQ7_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ7_9STRA)

HSP 1 Score: 660 bits (1703), Expect = 7.600e-233
Identity = 340/461 (73.75%), Postives = 401/461 (86.98%), Query Frame = 3 
Query:  138 MSGLALMGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            M+ +AL G R  GQDVR  NVTAA A+ANIVK+SLGPVGLDKMLVD++GDVTITNDGATIL+QL+VEHPAAKVLVELADLQDQEVGDGTTSVVI+AAELLKRANELIK  +HPT++M GYRLALK AVK+IK NL V   ++GR NL+NAAKT+M+SKI+GP+S FFA+MAV AVTAVR E++ +  K VV++PVS +H+LKCHG S  +S +  GYALNC RA QGMPT V+NAKIAC+D NLQ++KMQMGV VV  DVKEV+ IRQREMDITKERI K+L +GA VVLTTKGIDD+C+KYFVEAGAMAVRRVK ED++RIAKA+G  +VTT+ADMEGNE FD   LG AEEV+E+RVGDGELI+ KGT TQA  T+VLRGAN+++LDEMDRALHD+LMVIKR+L+SN LVAGGGAVE AL++ LES+ATT+ +REQLA+ EFAEALLVIPKTLAVNAA+
Sbjct:    1 MASVALKGSRQTGQDVRMANVTAAVAVANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELADLQDQEVGDGTTSVVIIAAELLKRANELIKVKVHPTSIMAGYRLALKHAVKHIKDNLVVQAKEMGRENLMNAAKTSMASKIIGPDSDFFADMAVSAVTAVRMETQ-EGSKTVVRHPVSNIHVLKCHGKSARESHLVNGYALNCTRAGQGMPTVVRNAKIACVDFNLQKHKMQMGVSVVCEDVKEVEGIRQREMDITKERILKMLEAGANVVLTTKGIDDLCMKYFVEAGAMAVRRVKMEDLKRIAKASGGQVVTTMADMEGNEAFDPAWLGTAEEVAEERVGDGELIYLKGTATQACVTLVLRGANEYLLDEMDRALHDSLMVIKRVLDSNSLVAGGGAVEVALNVALESYATTITTREQLAVMEFAEALLVIPKTLAVNAAK 460
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BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Match: A0A1W0A1E9_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1E9_9STRA)

HSP 1 Score: 671 bits (1731), Expect = 2.260e-226
Identity = 346/458 (75.55%), Postives = 400/458 (87.34%), Query Frame = 3 
Query:  147 LALMGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHILKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ 1520
            L + G RT G+DVR QNVTAA AIANIVKSSLGPVGLDKMLVD++GDVTITNDGATILK L+VEHPA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL++N IHPT+++ GYRLA++EAVKYIK +L VPVD +GR +LVNAAKT+MSSKI+GPES FFA + VDAVT+V+T  EG  GK V KYPVSA+++LK HG S L+S +  G+ALNC RASQ MP++VKNAKIA LD +LQR+KMQMGVQ+VV D KEVDAIRQRE DITKERI+KIL +GA V+LTTKGIDD+C+KYFVE+G M VRR KKED+RRIAKATG  +V TLADMEG ETFDA  LG A EVSE+RVGDGELI+ KG  T+ + T+VLRGAN+  LDE+DR+LHD+LMV+KRMLESN LVAGGGAVE+ALSIYLE+FATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+
Sbjct:  821 LVVDGTRTSGKDVREQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVQNKIHPTSIIAGYRLAMREAVKYIKEHLSVPVDSIGRASLVNAAKTSMSSKIIGPESEFFANLVVDAVTSVKTTEEGAKGKIVTKYPVSAINVLKAHGKSALESQLVDGFALNCTRASQAMPSTVKNAKIALLDFDLQRHKMQMGVQMVVTDPKEVDAIRQREYDITKERIQKILDAGANVILTTKGIDDLCMKYFVESGCMGVRRCKKEDLRRIAKATGGQVVLTLADMEGEETFDAKCLGHAAEVSEERVGDGELIYIKGCATRQATTVVLRGANEMALDEIDRSLHDSLMVVKRMLESNQLVAGGGAVESALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAK 1278
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig117.1504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQJ7_ECTSI5.940e-30396.70T-complex protein 1 subunit alpha n=2 Tax=Ectocarp... [more]
A0A835YVW9_9STRA4.530e-27086.34T-complex protein 1 subunit alpha n=1 Tax=Tribonem... [more]
A0A024TJ60_9STRA8.730e-23775.33T-complex protein 1 subunit alpha n=15 Tax=Eukaryo... [more]
A0A024G0Q1_9STRA2.350e-23475.99T-complex protein 1 subunit alpha n=2 Tax=Albugo c... [more]
A0A7S1TNK3_9STRA9.120e-23473.58T-complex protein 1 subunit alpha (Fragment) n=1 T... [more]
H3G982_PHYRM2.140e-23374.24T-complex protein 1 subunit alpha n=23 Tax=Oomycot... [more]
M4BE66_HYAAE2.140e-23373.58T-complex protein 1 subunit alpha n=8 Tax=Oomycota... [more]
A0A7S2BQP8_9STRA2.460e-23375.54T-complex protein 1 subunit alpha n=1 Tax=Florenci... [more]
A0A7S2UZQ7_9STRA7.600e-23373.75T-complex protein 1 subunit alpha n=1 Tax=Fibrocap... [more]
A0A1W0A1E9_9STRA2.260e-22675.55T-complex protein 1 subunit alpha n=1 Tax=Thrausto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig117contigH-canaliculatus_F_contig117:386..7745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score836.3
Seed ortholog evalue7.2e-240
Seed eggNOG ortholog2880.D8LQJ7
Preferred nameTCP1
KEGG koko:K09493
GOsGO:0000003,GO:0000166,GO:0000228,GO:0000242,GO:0000785,GO:0000790,GO:0000792,GO:0001669,GO:0002064,GO:0002065,GO:0002066,GO:0002199,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0005737,GO:0005794,GO:0005813,GO:0005815,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0006403,GO:0006457,GO:0006458,GO:0006810,GO:0007021,GO:0007154,GO:0007165,GO:0007166,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007292,GO:0007338,GO:0007339,GO:0008037,GO:0008104,GO:0008144,GO:0008150,GO:0009566,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0010941,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0017076,GO:0019219,GO:0019221,GO:0019222,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030141,GO:0030154,GO:0030554,GO:0030587,GO:0030707,GO:0030855,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031410,GO:0031625,GO:0031647,GO:0031974,GO:0031981,GO:0031982,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032991,GO:0033032,GO:0033036,GO:0033043,GO:0033044,GO:0034097,GO:0034622,GO:0035036,GO:0035639,GO:0035722,GO:0036094,GO:0042000,GO:0042221,GO:0042886,GO:0042981,GO:0043067,GO:0043085,GO:0043167,GO:0043168,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044053,GO:0044085,GO:0044093,GO:0044183,GO:0044297,GO:0044389,GO:0044403,GO:0044417,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044450,GO:0044454,GO:0044464,GO:0044703,GO:0044766,GO:0045184,GO:0045935,GO:0048232,GO:0048468,GO:0048477,GO:0048515,GO:0048518,GO:0048522,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051338,GO:0051347,GO:0051701,GO:0051703,GO:0051704,GO:0051716,GO:0051808,GO:0051836,GO:0051972,GO:0051973,GO:0060255,GO:0060341,GO:0060429,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070202,GO:0070203,GO:0070671,GO:0070887,GO:0071310,GO:0071345,GO:0071349,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090666,GO:0090670,GO:0090685,GO:0090702,GO:0097159,GO:0097223,GO:0097367,GO:0097708,GO:0099080,GO:0099081,GO:0099120,GO:0099503,GO:0099512,GO:0099513,GO:0101031,GO:1901265,GO:1901363,GO:1901998,GO:1902579,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904872,GO:1904874,GO:1904951,GO:2000106,GO:2000109,GO:2000112,GO:2000278,GO:2000573,GO:2001252
EggNOG free text desc.translocation of peptides or proteins into other organism involved in symbiotic interaction
EggNOG OGsCOG0459@1,KOG0360@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Hectar predicted targeting categoryother localisation
Exons10
Model size1538
Cds size1401
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928863.0786417-CDS-H-canaliculatus_F_contig117:385..6081622928863.0786417-CDS-H-canaliculatus_F_contig117:385..608Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 386..608 -
1696845593.1972754-CDS-H-canaliculatus_F_contig117:385..6081696845593.1972754-CDS-H-canaliculatus_F_contig117:385..608Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 386..608 -
1622928863.0921118-CDS-H-canaliculatus_F_contig117:2161..22801622928863.0921118-CDS-H-canaliculatus_F_contig117:2161..2280Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 2162..2280 -
1696845593.2170587-CDS-H-canaliculatus_F_contig117:2161..22801696845593.2170587-CDS-H-canaliculatus_F_contig117:2161..2280Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 2162..2280 -
1622928863.1028636-CDS-H-canaliculatus_F_contig117:2715..28391622928863.1028636-CDS-H-canaliculatus_F_contig117:2715..2839Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 2716..2839 -
1696845593.2311776-CDS-H-canaliculatus_F_contig117:2715..28391696845593.2311776-CDS-H-canaliculatus_F_contig117:2715..2839Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 2716..2839 -
1622928863.1128976-CDS-H-canaliculatus_F_contig117:3443..36161622928863.1128976-CDS-H-canaliculatus_F_contig117:3443..3616Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 3444..3616 -
1696845593.2450552-CDS-H-canaliculatus_F_contig117:3443..36161696845593.2450552-CDS-H-canaliculatus_F_contig117:3443..3616Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 3444..3616 -
1622928863.1221898-CDS-H-canaliculatus_F_contig117:4445..46401622928863.1221898-CDS-H-canaliculatus_F_contig117:4445..4640Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 4446..4640 -
1696845593.260593-CDS-H-canaliculatus_F_contig117:4445..46401696845593.260593-CDS-H-canaliculatus_F_contig117:4445..4640Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 4446..4640 -
1622928863.132576-CDS-H-canaliculatus_F_contig117:5107..52431622928863.132576-CDS-H-canaliculatus_F_contig117:5107..5243Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 5108..5243 -
1696845593.268671-CDS-H-canaliculatus_F_contig117:5107..52431696845593.268671-CDS-H-canaliculatus_F_contig117:5107..5243Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 5108..5243 -
1622928863.143944-CDS-H-canaliculatus_F_contig117:5706..58851622928863.143944-CDS-H-canaliculatus_F_contig117:5706..5885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 5707..5885 -
1696845593.2768443-CDS-H-canaliculatus_F_contig117:5706..58851696845593.2768443-CDS-H-canaliculatus_F_contig117:5706..5885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 5707..5885 -
1622928863.1577923-CDS-H-canaliculatus_F_contig117:6154..62651622928863.1577923-CDS-H-canaliculatus_F_contig117:6154..6265Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 6155..6265 -
1696845593.286607-CDS-H-canaliculatus_F_contig117:6154..62651696845593.286607-CDS-H-canaliculatus_F_contig117:6154..6265Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 6155..6265 -
1622928863.175728-CDS-H-canaliculatus_F_contig117:6878..69771622928863.175728-CDS-H-canaliculatus_F_contig117:6878..6977Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 6879..6977 -
1696845593.2995281-CDS-H-canaliculatus_F_contig117:6878..69771696845593.2995281-CDS-H-canaliculatus_F_contig117:6878..6977Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 6879..6977 -
1622928863.1950593-CDS-H-canaliculatus_F_contig117:7566..76081622928863.1950593-CDS-H-canaliculatus_F_contig117:7566..7608Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 7567..7608 -
1696845593.3084419-CDS-H-canaliculatus_F_contig117:7566..76081696845593.3084419-CDS-H-canaliculatus_F_contig117:7566..7608Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig117 7567..7608 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928863.2083924-UTR-H-canaliculatus_F_contig117:7608..77451622928863.2083924-UTR-H-canaliculatus_F_contig117:7608..7745Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig117 7609..7745 -
1696845593.3196075-UTR-H-canaliculatus_F_contig117:7608..77451696845593.3196075-UTR-H-canaliculatus_F_contig117:7608..7745Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig117 7609..7745 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig117.1504.1prot_H-canaliculatus_F_contig117.1504.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig117 386..7608 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig117.1504.1

>prot_H-canaliculatus_F_contig117.1504.1 ID=prot_H-canaliculatus_F_contig117.1504.1|Name=mRNA_H-canaliculatus_F_contig117.1504.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=467bp
MSGLALMGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGD
VTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELL
KRANELIKNNIHPTTVMTGYRLALKEAVKYIKANLCVPVDKLGRPNLVNA
AKTAMSSKILGPESSFFAEMAVDAVTAVRTESEGDSGKKVVKYPVSAVHI
LKCHGLSLLDSMVEPGYALNCVRASQGMPTSVKNAKIACLDINLQRYKMQ
MGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDVCL
KYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDADVLGE
AEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALM
VIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLV
IPKTLAVNAAQVGRSV*
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mRNA from alignment at H-canaliculatus_F_contig117:386..7745-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig117.1504.1 ID=mRNA_H-canaliculatus_F_contig117.1504.1|Name=mRNA_H-canaliculatus_F_contig117.1504.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7360bp|location=Sequence derived from alignment at H-canaliculatus_F_contig117:386..7745- (Hapterophycus canaliculatus Oshoro5f female)
AGGCGAAGCAAAGTTGAGCGAAGTAGCGTCTCTGGTTTTCTATCTACCTC
TGCGGGCTTCTCCTAGCGTGTGTCGAGCCACGGAACGGACTATCTGCTTG
CTGACACTTCTCAGCCTATCAGAGGGTTCGCGGCACCATGTCGGGACTCG
CATTGATGGGAGATCGGACCATGGGTCAGGTGAGCCGCCAAATCCATTCG
AAAATCAAATCGAGAGAGGGATCTGGAGGGTGTGGGTATAAGACATTGGG
CGGCAGGGGTGCACTGGCGCAACGCAATGTCTACGGTCTCAGACTGCTCA
GTTGTGGACAAAAGTGCAATAGTCGCCCGTTTCCATGAGGAAGATCGGGG
ATGTTTGGGGGTAGACAATTGGGTGTTGAAATTTTGAGTTCGTGGTTGTT
CTTTACCAGACGGCAGCGCCCCTGTCTAGGTCTCGCACGCTGTGAGGCGA
CCATCTACTCCTCCGCCCTTCCTTTGAGGAGCGAGGAAATTAGTTGCATT
CCTTCTCTGCCCTTGCTATAGAGCCGTCAGAGACATGCAAAACCTCTTGC
CGTGGCTGTTGGCCTGAGAACCCTTTTTTCAAAATCGTACACGAATCAAA
CCCTCCTCACAAGCCTCTGACCGTTTCCAGCCCCCTCTTATTTCAACAAC
TCTGTTGGGAAACAGATACTCGTACTCACATACTTACCCAGGGGCGTAGA
GATTGTTTGGGGCGCAATACAGGTACTTGTACCGATGTCGATTTTTGCGC
CTCTCTCCGGTGCCACAGGATGTCCGAACACAAAACGTTACAGCCGCAAC
GGCGATCGCCAATATTGTAAAGTCCTCGCTCGGACCGGTGGGATTGGACA
AGATGCTGGTTGATGAGGTAAGCTCAGGTGTACGCTCTACCTGCTTTGTA
GTACTCTTCAAAGTCTACTAACCTTACGAGTATATCCCTTCCGTTTGCCG
CCTGGAAACGCCACCGGTTCCCTCCCGTCCTGGCGTCATGCAAGGCTCGT
CAAGAGCCGTACATGCTTGATGTCATGAAAAACCTGACCAGTAGTGCCCT
TATCCAATCCACCTGCTTTGGTAACCAGCAGGTTGGAAAATGGAAACAGC
AGACGGCGTTGATGTAAACGTTTTGCACGAGGTGGTTCAGTCGCGGCGAC
ATGCACGTGCCCGGGTTGGACAATATTGCTACAAGCTCTGTCCTCCGAAC
GTTGGTCTCGGAAGGGCGGTCAAGCGCCAGACTCCGATAGGAAATGCTTG
CGTTTGCATCCGGGCTTAATGGTGTGGAGTGTGGTGGCGAGCTCTCTATC
ACCGATTGGGTGGAGTATACACTTCTACTCGAAGTACTTCTACGGCGGTG
CTAGAAACGGGATTGTAATCGTGGTCGTGTTGCGAACTTGTGGGAAGTGA
TACATCCTTCCGCCCGTCCGGCCGTCCATCCTGCCGACGAAAACCAATCG
TTTCGGCCATGACGGCGATATCCGATCCAGGTTGGAGACGTTACCATCAC
CAACGATGGAGCGACCATCCTGAAGCAGCTCGACGTCGAGCACCCCGCCG
CCAAGGTGTTGGTCGAGCTGGCGGACCTCCAGGACCAAGAGGTACGCGGT
TGCAACCAGGTGTTGCCGAAACTGCTGCTGTCCTGACTGTCGTAGGCGCC
GCCTTTGCTGGTGATGCCATTGATGTTAATTTTTAGGTCGTAGCAATCAT
GCCGAACGCCCCCCTCTTCTACTCCGTATATGGCAATGGTTGTGGTGAGA
CCTGGCTGTTCGACCTCACTAAACACGGTCTTGCACAATCTTGTCGTTGT
TGTTGTTGTCGTCTTAAAGTTGCCCATTTATTTTCACTGGTGTCTCTCTA
TTGTGTAAAGGTGGGTGACGGCACCACATCGGTGGTGATTGTGGCAGCGG
AGCTGTTGAAGAGGGCCAACGAGCTCATCAAGAACAACATCCACCCGACA
ACGGTCATGACCGGCTACCGGCTGGCCCTGAAGGAGGCCGTCAAGTACAT
CAAGGCGAACCTATGTGTGCCCGTCGACAAGCTGGGCAGGTCAGTTCGCT
AGTGGGCTGTTAGATCTGCTTCGGCCGGGGAGGAACTGTGGTGCAGAGGC
CCACGCATGGCTGGACTTGCGATTGTGCGCAGACACGCTTTTTTTTGTTA
TAGGTTGTGGAAAGAATCTCTGTGCGGCAACGGAGTATGCAGCTTATCGG
TGTGAAGCGAAAGGTGAAGAAGACCTCCCTCAATGTCGATGTCGGTGGTG
GAGCAATCAAGGGAAGCCGTATTTTGAGGTCCGGGGAGGCCAGTGGCTGT
CTTAGATGAAGGCACTGCTTGCTGTGCAGAGCCTGCAACGCTTTTCTTTG
AAAACGGAAGCACCAAGGTCGAGGTAGACTGATCATCTTCGGCGGTTGCA
ACCACCACAAATATGGTACGAGCATGTAGGTGCCCATCGGATTTCACATT
GACCTTCGCCCGTGACAACCTGCATCAAAACCCACAACAACGCGGACGAC
AGGCCAAACCTCGTGAACGCCGCGAAGACGGCCATGAGCTCCAAAATCCT
TGGGCCCGAGAGCTCGTTCTTCGCGGAGATGGCGGTAGACGCAGTCACCG
CGGTGAGGACAGAGTCCGAGGGAGATTCTGGAAAGAAGGTGAGCGTCAGC
AGCGATTGCCCATGTTGTGGGCAGGCTGTTTACTTCGGGGGTAAAGCCGG
GGGTCGCACGTGAAGCACAGATTTGGCTTGGGCAAGGCGAGAGGATGTGC
GGCTTGCACCAGTGTGGCTCTTAGCAAGCGCACCGTTTCTTGCTGTCGAA
AGGCTGCATGTGTAGAACCAGGTGTTGATTGTCACGAACATGAGACTGGG
TTTGCTTGTGCCAGCAAGCTTGTCGGGGATTGAATGGGAAGCGATTCCCG
AAGCAGATGTCACTCGTGCCTCCGCGATCGTGGTAGTGCTGAAACTTCGT
CCTCAGGTGTTGACCGCCAGAGCAGGCAAACCCCGTTTGCTTTGTTCGCT
TTTGTGTCGATTCGAAGCTGGTCGAATTCCTTTGGCGGCGATGTACATCC
CTACTCTCCTTCCTCCCACCCCTCCACCGCTCCCTCCCCCGAACGCTGTA
TCAAGGTTGTCAAGTACCCCGTATCGGCGGTGCACATCCTCAAATGCCAC
GGGCTGAGCCTGCTTGACTCCATGGTCGAGCCCGGATACGCGCTCAACTG
TGTGCGAGCCTCCCAGGGCATGCCGACGTCGGTTAAGAACGCCAAGATTG
CCTGTCTGGACATCAACCTGCAGCGATACAAGATGCAGATGGGGGTCCAG
GTGCGTGGCTGCTGCTGTTCGTCATGACGTTGACAGATCGCCGTAAACCG
TCGAAGCACAAAAACCGCGAAAAAAAATGACACTTTCGGCGTGTGATTTG
TGGGTGTAAATTGGTTTTGAGGGTTCATGGATCTCCAAGTAGGGGCGCTC
CGCCTCCCCAGAGAACATGTGCTCGGATTTTGATGTCGCTTGTGGCCAGA
ATTTGGACATTGGAGCGATTGCTAAGCGTTCCTTTCGCTGCTAACAAGGC
GACCTCTTAGATTTTTTCATGTCCACGCACTAATATTAGCTTACCAACGT
GACGTGAAGATTGCACCCCTGTGTTTTTTCCGTTGTTTGTTGGATTTGAC
AGCTTTGTCGCGCCGACTTCGCGTCAAAGCACATCGTTCGAAGCCGGTAT
TGACGGCCCCAGCAACTAGTAACATAGCAACATCCTGACCGTTTCCCCAC
CGGTTGAATGTGTCATCAGCCGCGTCTGGTATTCTGGCCGCTCGCATTTT
TACAATTTTTTCGTCCTTGAGAGCCTGATAGAGCAACCTCTTGGAGAAGA
ACGCGCATGTACGCAACGCTCTCATACCTCGTACCTTCCGATTCATGTTA
CAATGTGGAGCCCCAGCAAGGCCGAGGAGCTCGCAGGAAGAATCATGATC
CCAAAATTTGAGCGCGAGAACCCCACAAGCGCACCATACGCGGTCAAGTT
GAGAACAACGCATCTCCAGTTATCGTCCCGTAGGGCACGCCAACACGCTA
GATATGCACGCATCTTCACCCTGCCGTTTGCTGCCCTGCGTGTGCCGCCC
CGTCGCTCCGACGCCGGTCGCAAACGAAGGTGGTGGTGAACGATGTAAAG
GAGGTGGACGCTATCCGACAGCGGGAGATGGACATCACCAAGGAGCGCAT
CGAGAAGATCCTCAGCTCGGGGGCTACCGTGGTTCTCACCACCAAGGGCA
TCGACGACGTCTGCCTCAAGTACTTCGTAGAGGCGGGGGCCATGGCAGTA
AGGTAAGCGTTGCTTCCAGCGCTTGCCCCGTAGGAATAGTATTGCTTCGC
CATGCGCCTCTTGACTGCTGCGCGACAAGAGACCTTTGGAGTACGTACTT
CGCAAGCGCAGGGTCCGTGGGAAGACGCCGTCTGCAGGGAAATGTGCGGT
ATCGAAGTTGTGCTGTTCGAGTCGCAGGAAGTCGCCCGTCTTCCGCGTCA
TGCATGCGTGGAGTGTCCGTTGGCCCTAAGGCGTTTCAACGGGCCTTGCT
TCTCGCCGTCAAGTTTGCGCTGCTGCACGTCTGCGGTGTCGGGTGTTACT
CTTCGGCAGACGGATCAGGTCGGCGACCGTACACAGCATGATGGAAATCG
TTATCCGCAAGAGCCGAAAAGGGTCTCGGCTTTTGCTCCATGCCGCAAGC
AAGCACCCCCGCACGCCAGGTCATTTTTTCGTGGATTGTTGTCTTGCCAT
CGCAACCTTCGCCATGTGCTTACGCTAGCCTCCACCTTCCGTTCTTATGC
GGCTCGTTTTTTTCTGGAACGGCGCCTCTCCTTCCCTCATCCTCAACCAC
CCTGTTGCTGATGCTGATGCTGCTGCTGTTGCCGCCGCTCCGCTGTGCCG
ATGCAGGCGCGTGAAAAAGGAAGACATGCGGCGTATCGCCAAGGCTACGG
GCGCGAGCATCGTGACGACCTTGGCCGACATGGAGGGGAACGAAACGTTC
GACGCGGACGTGCTGGGAGAGGCGGAAGAGGTGAGGGAGCGGTTTCAGGC
AGAGGTCTCCTGGCGTGCGTGCCAGCGAGGATGTCAACGGGCGCTCTTGC
GACTTGTGCCAGAAGACACACACGAAAACTTTTGCTCTGGTTGGGAACGG
CCTTCTCCTGAAGCAATCGTGTTTTGCTCTTTGGGCCGTTCATGCTGGAT
GCCGTGTAATTCTTCCATTTGTGCCCTTCGATGCGATATCCAATCCCCAA
GTCTGTTGTACTGTGCAGTCGCTGCAGCGCAAGATGTACGGGACTATGTA
CGGTACCGTCTCTTGTGTGAGTTGTTTCTCTGTAAGATTCGTGCGGCGCG
ATCCTTAGTTCGGAATGCTGAACGTGATGTGCAATGCGCGCTTAGTGAAC
CTCGTGAAGACTTGTTGCGGAATTTCCCCTCAACGATTCGCGGTGCACCC
CACGTGGAATTCAAGGTTTCGGAGCAACGCGTTGGCGACGGCGAGTTGAT
TTTCTTCAAGGGCACCAAGACACAGGCGTCTTGCACCATCGTGCTCCGTG
GGGCCAACGACTTCATGCTCGACGAGATGGACAGGTATGGGCTATTGAGC
GAGAACGATGTCAAATAGGGCTATCTATCGGAACCGATACTATCGATAGT
ATCCGACGATGCCATACATATCACACATACGAAAATCGGGTTGTTTCGAC
CGAGTTTTTTAGTGTGGGTTTCCGTAGAAGCAGGGAGGCATAAATGCAAG
GGAAGAGGGCGGAATTATTGACAGAGTCCCGCCCTTGCACACAGACGAGA
GTGTGAGCGTCCAGCTGCGTATCCCGCACACCAACTTCGTGCGGTCGACC
AACTATTGTGTATGCAACTTCTGCTAGAACGAGAACCCGTGTCAGGCTGT
AGCAGTTAGTTTCGTTGAACCACCTTCCCTGCTGCGCGTGGTGCACGCTG
CCTTTATCTCACTTTTCGTCTTGTCTCCTGGATCGCGACGATGGCAGCTC
GCGACGGATGTGGGTAGTGAAAAGCGCAGTGTCCGCTTGTTCGATTTCCA
CCTGCTCCTTTGCTTGTACGCTGTCTCTTTCAGGTGTCTCTTTTGATTGA
TCTGGATCCGTTTTTCGTGTTCTCAGTCTCTTTTTTTGTGACGATGATAG
AACGTCTTGTGCTAAATTCACTTGGTTGATTTGAATCATTTTGGCGGCGA
ATTGAAGGTGAATTTTGATGAGAAACGGAGCCAAAATCCACGAATTTTCT
GCCTCCGGCGGCGCCTCCAGCGGGGACCCCTCGCCACCTCTTCAGCCCGG
GGGGGGCCATCTTGGGTTCGCTTTGCTCGCCAGCATCGGTTTCGCAGATA
TACGATAAATATTTCATGGATTTATTTATGCTTCCGATACAAAGCCCTGA
TGACAAGGCTTGTGACAAAGGCAGACTGACAGAATTAGGAAGAGAGGTTT
TGTGCATTGATTTGCCGATCAGCCGGTCAGCAGCCGAATGGTTCGCCAAT
TGGTGGCATGCCGCCGTGCTCTCCGCCAGCGCCAGAGAGTCTGTGCTGGA
CGAGATGGGCCGTTTGTTCACATGGCATGAAACAGACGAGACTCGAGAGA
CTGAGACGAGCGCGATGTATACATGCGCCGTGGTGTGGCGATGACAGTAA
ATGTTCCCTTGCCCGGAGACTGCCGCGAGACAAAGGGGGGCGGTCGCTGT
CGAGGGAGGCGAAGATCACCCCACCTGTGCTACCTTCCTGACTGTAGACA
TTGCCAGCGTAAAATCAGCCAACAGTGCGTGCAGTTGGCCTGTCGTACGA
TGCGGGGCGATTCACCCGCTCCCTTCGGTAGCCCCTTCCATTCGCCCTCT
GATCCTCCGCGCCCACTTCCTCCTCCTTCTCCCCCCCCTCCTATTTTTTC
TCCCCCTCTTCGTTGATGAACGACGGTCTCGTCAAGTTCGGCTCCTTCCC
ATGGACAGTTCCCCAGAGACCGATCTCCCTGCTGCTTCCGCTCTCTCGTC
TACCTCTGATCCTAGTGGCGCGGTTGCCGTTGCTTTTGCCGTCCTCGAGC
CGTCCTCGTGATATCACCATCAATGATGTCGCTCACGTCGTCGCCGTGGC
TACCGCCTGCTGGAAATGCTCTCTTGCATCCTTTCAGGGCCCTTCACGAC
GCGTTGATGGTGATCAAGAGGATGCTGGAGAGCAATGTACTGGTCGCGGG
GGGGGGGGCGGTGGAGACGGCGCTGTCCATCTACCTGGAGAGCTTTGCAA
CCACCCTAGGCTCTCGCGAGCAGCTTGCCATTGCCGAGTTCGCCGAGGCT
TTGCTCGTCATCCCCAAGACCCTCGCCGTGAACGCCGCGCAGGTCGGAAG
AAGTGTTTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig117:386..7745-

>mRNA_H-canaliculatus_F_contig117.1504.1 ID=mRNA_H-canaliculatus_F_contig117.1504.1|Name=mRNA_H-canaliculatus_F_contig117.1504.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2802bp|location=Sequence derived from alignment at H-canaliculatus_F_contig117:386..7745- (Hapterophycus canaliculatus Oshoro5f female)
ATGTCGGGACTCGCATTGATGGGAGATCGGACCATGGGTCAGATGTCGGG
ACTCGCATTGATGGGAGATCGGACCATGGGTCAGGATGTCCGAACACAAA
ACGTTACAGCCGCAACGGCGATCGCCAATATTGTAAAGTCCTCGCTCGGA
CCGGTGGGATTGGACAAGATGCTGGTTGATGAGGATGTCCGAACACAAAA
CGTTACAGCCGCAACGGCGATCGCCAATATTGTAAAGTCCTCGCTCGGAC
CGGTGGGATTGGACAAGATGCTGGTTGATGAGGTTGGAGACGTTACCATC
ACCAACGATGGAGCGACCATCCTGAAGCAGCTCGACGTCGAGCACCCCGC
CGCCAAGGTGTTGGTCGAGCTGGCGGACCTCCAGGACCAAGAGGTTGGAG
ACGTTACCATCACCAACGATGGAGCGACCATCCTGAAGCAGCTCGACGTC
GAGCACCCCGCCGCCAAGGTGTTGGTCGAGCTGGCGGACCTCCAGGACCA
AGAGGTGGGTGACGGCACCACATCGGTGGTGATTGTGGCAGCGGAGCTGT
TGAAGAGGGCCAACGAGCTCATCAAGAACAACATCCACCCGACAACGGTC
ATGACCGGCTACCGGCTGGCCCTGAAGGAGGCCGTCAAGTACATCAAGGC
GAACCTATGTGTGCCCGTCGACAAGCTGGGCAGGTGGGTGACGGCACCAC
ATCGGTGGTGATTGTGGCAGCGGAGCTGTTGAAGAGGGCCAACGAGCTCA
TCAAGAACAACATCCACCCGACAACGGTCATGACCGGCTACCGGCTGGCC
CTGAAGGAGGCCGTCAAGTACATCAAGGCGAACCTATGTGTGCCCGTCGA
CAAGCTGGGCAGGCCAAACCTCGTGAACGCCGCGAAGACGGCCATGAGCT
CCAAAATCCTTGGGCCCGAGAGCTCGTTCTTCGCGGAGATGGCGGTAGAC
GCAGTCACCGCGGTGAGGACAGAGTCCGAGGGAGATTCTGGAAAGAAGGC
CAAACCTCGTGAACGCCGCGAAGACGGCCATGAGCTCCAAAATCCTTGGG
CCCGAGAGCTCGTTCTTCGCGGAGATGGCGGTAGACGCAGTCACCGCGGT
GAGGACAGAGTCCGAGGGAGATTCTGGAAAGAAGGTTGTCAAGTACCCCG
TATCGGCGGTGCACATCCTCAAATGCCACGGGCTGAGCCTGCTTGACTCC
ATGGTCGAGCCCGGATACGCGCTCAACTGTGTGCGAGCCTCCCAGGGCAT
GCCGACGTCGGTTAAGAACGCCAAGATTGCCTGTCTGGACATCAACCTGC
AGCGATACAAGATGCAGATGGGGGTCCAGGTTGTCAAGTACCCCGTATCG
GCGGTGCACATCCTCAAATGCCACGGGCTGAGCCTGCTTGACTCCATGGT
CGAGCCCGGATACGCGCTCAACTGTGTGCGAGCCTCCCAGGGCATGCCGA
CGTCGGTTAAGAACGCCAAGATTGCCTGTCTGGACATCAACCTGCAGCGA
TACAAGATGCAGATGGGGGTCCAGGTGGTGGTGAACGATGTAAAGGAGGT
GGACGCTATCCGACAGCGGGAGATGGACATCACCAAGGAGCGCATCGAGA
AGATCCTCAGCTCGGGGGCTACCGTGGTTCTCACCACCAAGGGCATCGAC
GACGTCTGCCTCAAGTACTTCGTAGAGGCGGGGGCCATGGCAGTAAGGTG
GTGGTGAACGATGTAAAGGAGGTGGACGCTATCCGACAGCGGGAGATGGA
CATCACCAAGGAGCGCATCGAGAAGATCCTCAGCTCGGGGGCTACCGTGG
TTCTCACCACCAAGGGCATCGACGACGTCTGCCTCAAGTACTTCGTAGAG
GCGGGGGCCATGGCAGTAAGGCGCGTGAAAAAGGAAGACATGCGGCGTAT
CGCCAAGGCTACGGGCGCGAGCATCGTGACGACCTTGGCCGACATGGAGG
GGAACGAAACGTTCGACGCGGACGTGCTGGGAGAGGCGGAAGAGGCGCGT
GAAAAAGGAAGACATGCGGCGTATCGCCAAGGCTACGGGCGCGAGCATCG
TGACGACCTTGGCCGACATGGAGGGGAACGAAACGTTCGACGCGGACGTG
CTGGGAGAGGCGGAAGAGGTTTCGGAGCAACGCGTTGGCGACGGCGAGTT
GATTTTCTTCAAGGGCACCAAGACACAGGCGTCTTGCACCATCGTGCTCC
GTGGGGCCAACGACTTCATGCTCGACGAGATGGACAGGTTTCGGAGCAAC
GCGTTGGCGACGGCGAGTTGATTTTCTTCAAGGGCACCAAGACACAGGCG
TCTTGCACCATCGTGCTCCGTGGGGCCAACGACTTCATGCTCGACGAGAT
GGACAGGGCCCTTCACGACGCGTTGATGGTGATCAAGAGGATGCTGGAGA
GCAATGTACTGGTCGCGGGGGGGGGGGCGGTGGAGACGGCGCTGTCCATC
TACCTGGAGAGCTTTGCAACCACCCTAGGCTCTCGCGAGCAGCTTGCCAT
TGCCGAGTTCGCCGAGGCTTTGCTCGTCATCCCCAAGACCCTCGCCGTGA
ACGCCGCGCAGGTCGGAAGAAGTGTTTAGGGCCCTTCACGACGCGTTGAT
GGTGATCAAGAGGATGCTGGAGAGCAATGTACTGGTCGCGGGGGGGGGGG
CGGTGGAGACGGCGCTGTCCATCTACCTGGAGAGCTTTGCAACCACCCTA
GGCTCTCGCGAGCAGCTTGCCATTGCCGAGTTCGCCGAGGCTTTGCTCGT
CATCCCCAAGACCCTCGCCGTGAACGCCGCGCAGGTCGGAAGAAGTGTTT
AG
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