mRNA_H-canaliculatus_F_contig1168.1488.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Match: D7FLT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT7_ECTSI) HSP 1 Score: 197 bits (502), Expect = 2.980e-61 Identity = 120/207 (57.97%), Postives = 132/207 (63.77%), Query Frame = 1 Query: 1 MRTHAFLAALIAPHYYCVESFVLQYRAPASVDRDASAAAFSTPRRRCGSNTXXXXXXXXXMTSRENNSLKTATATVLLGGALLFTGVTGGANIARADVSMSPRCITGEGAQCDDLAEGNELIKSLQAKSALSKDRYFQETLDTYNQHNFKGERYPAFASWITPYYFKAEGKHMVKHKTGKYEILTNGEYVDLEKAGKVKNDVFLEED 621 MR H LAAL+ P CVESF + AP+S S + RC S MT L A VL+GGAL +TG ++ARADVS+SPRCITGEGAQC+DLAEGNELIKSLQAKSA+SKDRYFQETLDTYN HNFK YFKAE KHMVKH TGKYEILTN EY EKAGKV+NDVFL ED Sbjct: 1 MRLHVILAALVGPS--CVESFAVLCTAPSSSTSPVSTSL------RCRSTRTM-------MTLPTAGDLNRALGAVLVGGAL----ITGAMDVARADVSISPRCITGEGAQCEDLAEGNELIKSLQAKSAISKDRYFQETLDTYNVHNFKD-------------YFKAESKHMVKHNTGKYEILTNAEYAAAEKAGKVRNDVFLGED 175
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Match: A0A1Z5KK89_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK89_FISSO) HSP 1 Score: 70.1 bits (170), Expect = 1.080e-11 Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 1 Query: 292 VSMSPRCITGEGAQCDDLAEGNELIKSLQAKSALSKDRYFQETLDTYNQHNFKGERYPAFASWITPYYFKAEGKHMVKHKTGKYEILTNGEYVDLEKAGKV 594 V S C G G C DL+EGNELI+SLQ KSA++++RY QE LD Y N+ P +F GK +VK G + L + E L++ GKV Sbjct: 45 VISSKYCSAGVGEGCGDLSEGNELIRSLQEKSAINRERYQQEALDAYYMKNY-------------PDFFGVVGKTLVKKPDGTFVALADSEVEKLKQEGKV 132
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Match: A0A7S0CI77_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CI77_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.380e-10 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 271 ANIARADVSMSPRCITGEGAQCDDLAEGNELIKSLQAKSALSKDRYFQETLDTYNQHNFKGERYPAFASWITPYYFKAEGKHMVKHKTGKYEILTNGEYVDLEKAGKV 594 A+ + A + S C GEG+ CD++A+GN+ I+SLQ KSA K+ Y +E+LD Y N+ P FK+ + +VK G Y T+ E DL K GK+ Sbjct: 49 ASNSNAAILQSGGCAYGEGSACDEIADGNKFIQSLQQKSAARKEIYAKESLDAYYMKNY-------------PDMFKSMDRVLVKKPDGSYVTFTSEEASDLMKDGKI 143
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Match: A0A835ZAV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV3_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.270e-8 Identity = 36/110 (32.73%), Postives = 54/110 (49.09%), Query Frame = 1 Query: 283 RADVSMSPRCITGEGAQCDDLAEGNELIKSLQAKSALSKDRYFQETLDTYNQHNFKGERYPAFASWITPYYFKAEGKHMVKHKTGKYEILTNGEYVDLEKAGKVKNDVFL 612 R + C G G C AEG++LI+ LQ +SA + Q+ L+TYN+HNF YFK K MV+ +Y +++ EY EKAG V ++ ++ Sbjct: 66 RPSILRQEICEVGVGDGCAQAAEGSDLIRKLQQRSAERRAEREQQMLETYNEHNFAD-------------YFKTLNKRMVRKGPNQYVLMSETEYAAAEKAGLVYDNKYI 162
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Match: A0A7S0JL08_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JL08_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 1.440e-6 Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 1 Query: 307 RCITGEGAQCDDLAEGNELIKSLQAKSALSKDRYFQETLD-TYNQHNFKGERYPAFASWITPYYFKAEGKHMVKHKTGKYEILTNGEYVDLEKAGKVK 597 RC G+G CD LA+GNEL+ LQA+S L+K++ ++ D T Q + YF A K++V+ GKY++L EY L GK+K Sbjct: 80 RCEGGQGDACDRLADGNELVLQLQARSRLNKEKNERDLYDKTVRQLGYTD-------------YFDALDKNLVQLPDGKYKLLDAAEYGRLRGEGKIK 164
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Match: A0A7S2MFL5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MFL5_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 3.460e-6 Identity = 37/103 (35.92%), Postives = 51/103 (49.51%), Query Frame = 1 Query: 292 VSMSPRCITGEGAQCDDLAEGNELIKSLQAKSALSKDRYFQETLD-TYNQHNFKGERYPAFASWITPYYFKAEGKHMVKHKTGKYEILTNGEYVDLEKAGKVK 597 + + RC GEG C LA+GNEL+ LQA+SA +K++ +D T Q + +F A K++VK GKY L EY L K GK+K Sbjct: 64 IGNAERCENGEGEACARLADGNELVAKLQARSAANKEKNAAALIDKTVMQLGYSD-------------FFDALDKNLVKLPNGKYATLDADEYSRLRKEGKLK 153
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Match: B7G784_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G784_PHATC) HSP 1 Score: 52.4 bits (124), Expect = 1.310e-5 Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 232 LGGALLFTGVTGGANIARADVSMSPR-CITGEGAQCDDLAEGNELIKSLQAKSALSKDRYFQ 414 +G A G T AD +S + C +G G CDDL+EGNELIKSLQ KSA +D+Y Q Sbjct: 33 IGSAAALIGGTNFVTFESADALISSKYCASGVGDGCDDLSEGNELIKSLQEKSAAKRDQYAQ 94 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1168.1488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1168.1488.1 >prot_H-canaliculatus_F_contig1168.1488.1 ID=prot_H-canaliculatus_F_contig1168.1488.1|Name=mRNA_H-canaliculatus_F_contig1168.1488.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=208bp MRTHAFLAALIAPHYYCVESFVLQYRAPASVDRDASAAAFSTPRRRCGSNback to top mRNA from alignment at H-canaliculatus_F_contig1168:24111..27599+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1168.1488.1 ID=mRNA_H-canaliculatus_F_contig1168.1488.1|Name=mRNA_H-canaliculatus_F_contig1168.1488.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3489bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1168:24111..27599+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1168:24111..27599+ >mRNA_H-canaliculatus_F_contig1168.1488.1 ID=mRNA_H-canaliculatus_F_contig1168.1488.1|Name=mRNA_H-canaliculatus_F_contig1168.1488.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1248bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1168:24111..27599+ (Hapterophycus canaliculatus Oshoro5f female)back to top |