mRNA_H-canaliculatus_F_contig11629.1438.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 328 bits (840), Expect = 1.340e-105 Identity = 180/290 (62.07%), Postives = 202/290 (69.66%), Query Frame = 1 Query: 1 SPAGWGALLAFPAALLAGKWKENSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFASAVGKLIPDNPYLRGLGIVTLAALGSGGLKALSSNNLLRASWPITFVDPWQVLTASAWAINMRANSVKGRLDGTRQDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIRGSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAHGVLREAWFAADMTPLQYLLVHLPL 870 SP GW ALLA P L+GK+ + + XXXXXXXXXXXXXXXXXX V +GKL+PDN YLR L I+ +AALGSGGL AL++NNLLRA+WPIT VDPWQVL ASAWA+NMRA GRLDG Q SSG +PVRF SPAGWAFAIW PIF GE ++VAFQL+P PSIRGSWWLSDISPWFAGAML+Q LWCFSFRPWARDSGLLWLPALLLGG ++LGG H +LREAWF +DMT LQYL VH+PL Sbjct: 169 SPTGWAALLALPIVFLSGKYNTDGGSSRAPAAVKAKPAAAKKAKPPSQAVQKKXXXXXXXXXXXXXXXXXXTKRSGPPAASRGGGGVAGVVGGVLGKLVPDNAYLRSLLIIVIAALGSGGLHALTTNNLLRAAWPITLVDPWQVLAASAWALNMRATFGGGRLDGIGQSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQLMPLPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPL 458
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.350e-59 Identity = 102/200 (51.00%), Postives = 126/200 (63.00%), Query Frame = 1 Query: 277 SAVGKLIPDNPYLRGLGIVTLAALGSGGLKALSSNNLLRASWPITFVDPWQVLTASAWAINMRANSVKGRLDGTR-QDTSSGQKP-VRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIRGS-WWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAHGVLREAWFAADMTPLQYLLVHLP 867 S + +IP+ P R + + LA G GGL + + L SW + +V PWQVLT ++WAIN A S GRLDG +D + P VR+F PAGWAF+IW PIFLGE +Q LP + + WLS +SPW + A L Q+ WC SFR WARDSGLLW PA LLGG A LGGAH V+R A A +M+ LQY LVHLP Sbjct: 2 SFLQGIIPEKPVQRAVSVTALAIAGCGGLYFAAESGAL-VSWSLPYVKPWQVLTLTSWAINTAAVSAGGRLDGPEPEDPKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLP 200
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.410e-57 Identity = 96/188 (51.06%), Postives = 126/188 (67.02%), Query Frame = 1 Query: 313 LRGLGIVTLAALGSGGLKALSSNNLLRASWPITFVDPWQVLTASAWAINMRANSVKGRLDGTRQDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIRGSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGL--LWLPALLLGGVAISLGGAHGVLREAWFAADMTPLQYLLVHLPL 870 LR + +T AA G + L + N L W + +PWQVL A + +N A V GRLDG RQ + R+F+PAGWAFAIWAPIF GE+LFV +Q LP +R SWWL+++SP+F+GAML QTLWC +FRPWAR +GL W+PALLLG A +LGGAHG+L +A ++++PL Y L +PL Sbjct: 1 LRAVATLTAAAAIVAGCRNLKATNALTTPWNFRYAEPWQVLNAVTYLLNFAAVRVPGRLDG-RQWSQDAATQQRYFAPAGWAFAIWAPIFAGELLFVIYQALPLARVRTSWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGILVQALEDSELSPLSYALAFVPL 187
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.570e-47 Identity = 89/201 (44.28%), Postives = 128/201 (63.68%), Query Frame = 1 Query: 268 VFASAVGKLIPDNPYLRGLGIVTLAALGSGGLKALSSNNLLRASWPITFVDPWQVLTASAWAINMRANSVKGRLDGTRQDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIRGSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAHGVLREAWFAADMTPLQYLLVHLPL 870 V A AV + +P R + +T A L + + ++ AS PWQ+L AWA+NM A SV GRLDG++ S + +RFF+PAGWAFAIW PIFLGE LF FQLLP +++ S+ + ++ W+ A+ Q+LWC +FRPWA+ SG LWLPA LL A++LGGAH VL +A + +++ L+Y++V++PL Sbjct: 8 VKAKAVSDMATADPLRRSIATLTAAILVFFVIPL--NEKIVNASISWLPFRPWQILNILAWALNMWAVSVPGRLDGSQAAALSDEGEIRFFTPAGWAFAIWGPIFLGEALFAFFQLLPIETVQTSF-IPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPL 205
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: A0A7S3UYN9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYN9_HETAK) HSP 1 Score: 108 bits (271), Expect = 2.500e-25 Identity = 63/143 (44.06%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 334 TLAALGSGGLKALSSNNLLRASWPITFVD------------PWQVLTASAWAINMRANSVKGRLDGTRQDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIRGSWWLSDISPWFAGAMLYQTLWCFSFRPWA 726 TL ALG G+ A + +L A+ I D PWQ+L A+ M A S+ GR+DG + G K +RFF+PAGWAFAIWAPIFLGE LF +Q LP + +G +L ++P++ AM +Q+LWC +FRPWA Sbjct: 48 TLHALGKLGVGAAAVPAVLYAAKDIIVQDTDIGLSSFITFKPWQLLNFFAFFGQMWAVSLPGRVDGEQAAPKDG-KDIRFFTPAGWAFAIWAPIFLGEALFAVYQALPGSAAKG--FLPALTPYWLAAMGFQSLWCAAFRPWA 187
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK) HSP 1 Score: 112 bits (279), Expect = 7.870e-25 Identity = 57/153 (37.25%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 424 WQVLTASAWAINMRANSVKGRLD--GTRQDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIRGSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAHGVLREA--WFAADMTPLQYLLVHLPL 870 WQVL + N A GR+D R + S ++ RFF+PAGWAF IW PIF+GE +FV +Q LP I+ +L+ +SP++ A+ +Q++W F RPWA ++G W+ A LL ++L G H V+ D+ L +++ +PL Sbjct: 98 WQVLNTFIFLFNRWAGKRPGRMDMKQPRAEASQKKEVARFFTPAGWAFRIWIPIFIGETIFVFYQALPINYIKNKDFLAMLSPFWIAAIGFQSIWTFCARPWAVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPL 250
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.130e-24 Identity = 82/202 (40.59%), Postives = 110/202 (54.46%), Query Frame = 1 Query: 304 NPY--LRGLGIVTLAALGSGGLKALSSNNL------LRASWPITF-VDPWQVLTASAWAINMRANSVKGRLDGTR-QDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPF---PSIRGSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAHGVLREAWFAADMTPLQYLLVHLPL 870 +PY LR L I++ AA G L + N+ +R P F + QVL AW N A + GR DG +D S PVRFF+P+ +AFAIWAPIFLGE L +QL P+++ +L+ ++P A A Q+LWC +FRPW + ++P+ LL A+ L H VLREA A M P YL+VHLPL Sbjct: 70 SPYANLRALAILSAAA---GSWAVLRAPNVREWFDDVRPLHPKYFPLARHQVLILLAWLTNKIAVRIPGRSDGKSWKDAMSS--PVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASSRLAPALQP--YLARLAPPLAQAFAAQSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPL 262
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: L1K151_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K151_GUITC) HSP 1 Score: 107 bits (267), Expect = 1.130e-23 Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 337 LAALGSG----GLKALSSNNLLRASWPITFVDPWQVLTASAWAINMRANSVKGRLD---GTRQDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIR--GSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAH 798 + ALGS G A+S+++L++ + I + WQ++ + +A+ AN + GRLD G + T +RFF+PAG+AFAIWAPIFLGEML + L+P S+R GS WL ++P +A A + Q LWC +FRPWA W+PA LL A++L +H Sbjct: 1 MGALGSASVLYGFFAVSTSDLMKRT--IFGLQSWQLMISGGYALFFCANLIPGRLDTVLGRPKRTD-----LRFFTPAGFAFAIWAPIFLGEMLMMFSVLMP-DSLRSPGSGWLEAMAPSYAAASVAQALWCLAFRPWALK--YQWIPASLLTIAALALFESH 153
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: A0A7S0UDI1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UDI1_HEMAN) HSP 1 Score: 100 bits (248), Expect = 2.010e-20 Identity = 59/156 (37.82%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 370 LSSNNLLRASWPITFVDPWQVLTASAWAINMRANSVKGRLDGTRQDTSSGQKPVRFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSI---RGSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAHGVLREAWFAA 828 +S NLL S T +D W+ + A ++A+ S+ GRLD + ++ RFF+P+GWAFAIW PIFL E++ + S+ G WL+ ++P +A A L+Q +W +FR WA D LW+PA L A L AHG + A AA Sbjct: 115 VSGANLLAGSGIATSLDGWRTVLAVSFALFFAFTSIPGRLD--MKLGKPKKEDGRFFTPSGWAFAIWGPIFLLELVMAVSAAVAPGSLLGPAGGEWLTQMAPGYAAAALHQVVWTLAFREWAIDK--LWIPATCLTLAAFGLFSAHGAVSRALEAA 266
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Match: A0A7S0Q3J2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q3J2_9EUKA) HSP 1 Score: 97.8 bits (242), Expect = 1.190e-19 Identity = 60/142 (42.25%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 403 PITFVDPWQVLTASAWAINMRANSVKGRLDGTRQDTSSGQKPV----RFFSPAGWAFAIWAPIFLGEMLFVAFQLLPFPSIRGSWWLSDISPWFAGAMLYQTLWCFSFRPWARDSGLLWLPALLLGGVAISLGGAHGVLREA 816 P+ + WQVL A+AW +N A V GR DG TS +KP F+PAG+AF IWAPIFLGE L + + L + G+ ++P + A L Q+ WC +FRP LLW+PALLL +LG AH +R A Sbjct: 115 PLPYPAVWQVLLAAAWVMNNIAVVVPGRYDGRSVMTS--EKPTAAGANLFTPAGYAFIIWAPIFLGEGLMMLY-LTNVQTPLGA----AVAPAWCAAALAQSCWCAAFRPSVCGPRLLWVPALLLASTGAALGVAHRAIRTA 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11629.1438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11629.1438.1 >prot_H-canaliculatus_F_contig11629.1438.1 ID=prot_H-canaliculatus_F_contig11629.1438.1|Name=mRNA_H-canaliculatus_F_contig11629.1438.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=290bp SPAGWGALLAFPAALLAGKWKENSDNNAAGGRASSTTPAVKSKPAAKKTAback to top mRNA from alignment at H-canaliculatus_F_contig11629:131..2981- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11629.1438.1 ID=mRNA_H-canaliculatus_F_contig11629.1438.1|Name=mRNA_H-canaliculatus_F_contig11629.1438.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2851bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11629:131..2981- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11629:131..2981- >mRNA_H-canaliculatus_F_contig11629.1438.1 ID=mRNA_H-canaliculatus_F_contig11629.1438.1|Name=mRNA_H-canaliculatus_F_contig11629.1438.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1740bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11629:131..2981- (Hapterophycus canaliculatus Oshoro5f female)back to top |