mRNA_H-canaliculatus_F_contig11616.1428.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D7FTM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI) HSP 1 Score: 130 bits (327), Expect = 8.870e-35 Identity = 76/179 (42.46%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 85 VYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGYRRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIW 621 VY A S+ FA + PRD +GR G Q TLL ++ + + K E+F E + K L R+G K++K+ +G LP+GK GF RRAR+ A AHLGE TL + KG +E SVDGTVVLR++ PS+FG+RR D +Y++Q ++G+ V RRG VWG++A +I+ Sbjct: 2 VYAAPADGSVVFATSTGRVPRDEEGRATGSLPQKRLTLLAANERLMAKA----EDFRSEIILRRLVKKNAL---REGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGEATLKLTSKGILEVSVDGTVVLRKKGPSYFGFRRTDPSYELQVTEEGIEVSRRGDFVWGVKAEDIF 173
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D7G0T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T0_ECTSI) HSP 1 Score: 121 bits (304), Expect = 7.950e-32 Identity = 56/101 (55.45%), Postives = 78/101 (77.23%), Query Frame = 1 Query: 328 RTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGYRRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIWLQM 630 ++K++ VLG LP+GKHGFR RRAREH AHLGE TL++ KG +E SVDG++VLR+ PS+FG+R+KDSTY+++ + G+AV R G+ WGI+A E Q+ Sbjct: 19 KSKMVTVLGFLPFGKHGFRRRRAREHVAAHLGEATLSVTNKGDLEVSVDGSIVLRKSRPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQV 119
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D7FXU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.020e-31 Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 1 Query: 85 VYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGYRRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIWLQM 630 VY S+ A P D + R I + TLL + P+ + KV R EE + A +G ++K++ VLG LP+GKHGFR RRAREHA AHLGE TL++ G +E SVDG +VLR+ PS+FG+R+KDSTY+++ + G+AV R G WGI+A E Q+ Sbjct: 2 VYATSIDGSVVHATATGTPPGDLEDRTIDPVSLTRRTLLEAIPRCMSKVEGLRAEIMEEREEAEKEAV-------EGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNTGDLEVSVDGFLVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGEYAWGIQAREPLAQV 176
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D7G9B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.750e-30 Identity = 69/158 (43.67%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 142 PRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGYRRKDSTYQMQADDKGLAVMRRGRRVWGIEAPE 615 PRD G G Q + TLL ++P+K+ KV R L R A +G +R K+ ++G LP+GKHGF RRAREHA AH+GE TL+I +KG +E SVDG VVLR+ PS+FG+RR D +Y+++ ++G+ + RRG WGI+A + Sbjct: 339 PRDADGNTTGPVPQKNRTLLTANPRKMSKVRALRSENIAARLEKKRAAL-------EGRTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHMGEATLSITKKGGLEVSVDGIVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYDWGIKAQD 489
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D8LNB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB2_ECTSI) HSP 1 Score: 119 bits (297), Expect = 2.900e-30 Identity = 67/180 (37.22%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 85 VYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGY-RRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIW 621 +Y S+ A + RD +GR+IG Q T++ + +++ K+ R R + L + A R+G + KR+K+ + G+LP+GK+GFR RR REHA AHL E TL + KG +E S+DGT+V R+ PS+FG+ RRKD +Y++ +G+ + RRG+ W I+A +I+ Sbjct: 2 IYVSPNSGSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAA-------REGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNKGNLEVSIDGTIVQRKSRPSWFGFLRRKDPSYKLLVTKEGIEIYRRGKLDWVIKAEDIF 174
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D7FMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM4_ECTSI) HSP 1 Score: 124 bits (312), Expect = 8.200e-30 Identity = 74/182 (40.66%), Postives = 105/182 (57.69%), Query Frame = 1 Query: 85 VYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGYRRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIWLQM 630 VY S+ A P D + R I Q+ TLL ++P+++ V R E + A +G KR+K++ VLG LP+GKHGFR RRARE A AHLGE L++ KG +E SVDG++VLR+ PS+FG+R+KDSTY+++ + G+ V R G+ WGI+A E Q+ Sbjct: 314 VYATSIDGSVVHATATGTPPGDLEDRSIDPVSQTRRTLLEANPQRMSIVEGLRAEIVAETEEAEKAAV-------EGQGLKRSKMVTVLGFLPFGKHGFRRRRARERAAAHLGEAALSVTNKGDLEVSVDGSIVLRKSGPSWFGFRKKDSTYEVRVTEDGVVVSRGGKYDWGIQAREPLAQV 488
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D8LNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB6_ECTSI) HSP 1 Score: 125 bits (314), Expect = 9.400e-30 Identity = 72/199 (36.18%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 28 VKVGDVLVGKLASKDGSSAVYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGY-RRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIW 621 ++ G L GKL S + +Y +S+ A + RD +GR+IG Q T++ + +++ K+ R R + L + A R+G + KR+K+ + G+LP+GK+GFR RR REHA AHL E TL + +G +E S+DGT+V R+ PS+FG+ RRKD +Y++ +G+ + RRG+ W I+A +I+ Sbjct: 431 LRAGRFLFGKLMSPGKKAMIYVSPNSSSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAA-------REGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNRGNLEVSIDGTIVQRKSRPSWFGFLRRKDPSYKLLVTKEGIEIYRRGKLDWVIKAEDIF 622
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: A0A6H5K5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J3_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.110e-29 Identity = 71/193 (36.79%), Postives = 115/193 (59.59%), Query Frame = 1 Query: 46 LVGKLASKDGSSAVYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGY-RRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIW 621 L GKL S + +Y S+ A ++ PRD +GR IG Q T+L + +++ K+ R R + L ++ R+G + KR+K+ ++ +LP+GK+GFR RRAREHA AHL E TL + +GT+E S+DGT+V R+ PS+ G+ RRKD +++++ +G+ + RRG+ W I+A +I+ Sbjct: 490 LFGKLVSPGKKAMIYVSPNSGSVVHAASVGRAPRDEEGREIGPVPQKLMTVLTPNEQQMSKIERNRSEIWAQRLERSKAL-------REGHELKRSKMAAIMSVLPFGKNGFRRRRAREHAEAHLMEATLKLTNRGTLEVSIDGTIVQRKSRPSWLGFLRRKDPSFELRVTMEGIEIYRRGKLDWVIKAEDIF 675
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: A0A6H5L4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE) HSP 1 Score: 122 bits (305), Expect = 3.200e-29 Identity = 72/193 (37.31%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 37 GDVLVGKLASKDGSSAVYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGYRRKDSTYQMQADDKGLAVMRRGRRVWGIEAPE 615 G VL+ +L + +S Y S+ A + PRD G G Q++ TLL ++P+K+ KV R SE + G + R+G + KL ++G +P+GKHGF RRAREH A++GE TL+I KG + SVDG VVLR+ P FG+RR D +Y+++ + G+ + RRG WG++A + Sbjct: 234 GQVLLARLLNPARTSMAYASPTDGSVILATAIGNAPRDADGNTTGPVTQNNRTLLTANPRKMSKV---RALRSENIVAGLEKKRVA----REGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGEATLSITNKGGLGVSVDGIVVLRKSGPYCFGFRRTDRSYELRVTEAGVVISRRGMYDWGLKAQD 419
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Match: D8LNC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC7_ECTSI) HSP 1 Score: 122 bits (307), Expect = 9.280e-29 Identity = 69/199 (34.67%), Postives = 116/199 (58.29%), Query Frame = 1 Query: 28 VKVGDVLVGKLASKDGSSAVYFGGAGASLRFARTLEGGPRDRKGRRIGLPMQSSTTLLPSDPKKLKKVLRRRENFSEEELRGARGAKPVLGDRRDGTKDKRTKLLKVLGLLPYGKHGFRERRAREHALAHLGEVTLTIDRKGTVEGSVDGTVVLRRRSPSFFGY-RRKDSTYQMQADDKGLAVMRRGRRVWGIEAPEIW 621 ++ G L GKL S + +Y +S+ A + RD +GR+IG Q T++ + +++ K+ R R + L + A R+G + KR+K+ + G+LP+GK+GFR RR REHA AHL E TL + +G +E S+DGT+V R+ PS+FG+ RRKD +++++ +G+ + RRG+ W ++ +I+ Sbjct: 458 LRAGRFLFGKLMSPGKKAMIYVSPNSSSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAA-------REGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNRGNLEVSIDGTIVQRKSRPSWFGFLRRKDPSFELRVTMEGIEIYRRGKLDWVVKVEDIF 649 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11616.1428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11616.1428.1 >prot_H-canaliculatus_F_contig11616.1428.1 ID=prot_H-canaliculatus_F_contig11616.1428.1|Name=mRNA_H-canaliculatus_F_contig11616.1428.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=211bp LPDDEPIVAVKVGDVLVGKLASKDGSSAVYFGGAGASLRFARTLEGGPRDback to top mRNA from alignment at H-canaliculatus_F_contig11616:21..956+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11616.1428.1 ID=mRNA_H-canaliculatus_F_contig11616.1428.1|Name=mRNA_H-canaliculatus_F_contig11616.1428.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=936bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11616:21..956+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11616:21..956+ >mRNA_H-canaliculatus_F_contig11616.1428.1 ID=mRNA_H-canaliculatus_F_contig11616.1428.1|Name=mRNA_H-canaliculatus_F_contig11616.1428.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1266bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11616:21..956+ (Hapterophycus canaliculatus Oshoro5f female)back to top |