mRNA_H-canaliculatus_F_contig11605.1412.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11605.1412.1
Unique NamemRNA_H-canaliculatus_F_contig11605.1412.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: D7FZ68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ68_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.330e-55
Identity = 112/144 (77.78%), Postives = 123/144 (85.42%), Query Frame = 1
Query:    1 LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSS----TYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALD 420
            L +VVASLE RVSVLEPGRLD LRQKAQLAK+ELD LAKSR++ +S S     + R KK+EEAFATLE WQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELE VLK TNEGL  TR+SS EN++IVN+NVK  D
Sbjct:  336 LAEVVASLEKRVSVLEPGRLDVLRQKAQLAKSELDALAKSRSAPASGSXXXXXSARGKKVEEAFATLENWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEGVLKCTNEGLLDTRKSSAENVSIVNENVKLED 479          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: F0ZPQ9_DICPU (Dynactin 50 kDa subunit n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZPQ9_DICPU)

HSP 1 Score: 67.0 bits (162), Expect = 3.990e-10
Identity = 36/144 (25.00%), Postives = 82/144 (56.94%), Query Frame = 1
Query:    1 LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRLA 432
            +T  +  ++ ++S+L+  ++D L+QK +    E+D L K++   S+ + T   KK+ + F T+  W  ++  +PA+++RL  L +LH    SF+  +  ++  Q ++  +LK+ +  +    +S  +NL  +  N++ L++R++
Sbjct:  273 ITQSILEIKEKLSLLDTTKIDVLQQKMKSLSKEMDQL-KNQDEVSTKALTTNEKKINDIFETMNKWDSVSQQVPAIINRLYTLRSLHEEGISFSNHISNLDRQQNDITSLLKSNSSIMNKMDDSFKQNLLTIKSNIEHLEKRIS 415          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: A0A8J4PRW2_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRW2_9MYCE)

HSP 1 Score: 64.3 bits (155), Expect = 3.520e-9
Identity = 40/147 (27.21%), Postives = 83/147 (56.46%), Query Frame = 1
Query:    1 LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVE-NLAIVNDNVKALDRRLAGV 438
            +T  +  ++ ++S+L+  ++D L QK + A  E++   K++  + + S T   KK+ E +  +  W  I   +PA+++RL  L +LH    SF+  L  +E  Q ++  +LK+ N GL    + S + NL ++  N++++++R++ V
Sbjct:  280 ITQSILEIKEKLSLLDTTKIDVLSQKMKTATKEIESF-KTQDESLTKSLTSNEKKINEIYDLMTRWDTIGQQVPAIINRLYTLRSLHEDGISFSNHLTNLEKQQNDITSLLKS-NSGLINKMDDSFKSNLIVIKSNIESIEKRISNV 424          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: A0A1I8NP86_STOCA (Uncharacterized protein n=3 Tax=Calyptratae TaxID=43742 RepID=A0A1I8NP86_STOCA)

HSP 1 Score: 62.8 bits (151), Expect = 1.140e-8
Identity = 39/141 (27.66%), Postives = 79/141 (56.03%), Query Frame = 1
Query:    7 DVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRL 429
            D V  L ++ ++L+  ++D + ++     A++D +A    S+ SS    R +K+ E +   +  + +A  LP +++R+QALE+LH  + +FA+ + ++E  QT +   L N  E L + +E+  +NL  +N  V  ++ R+
Sbjct:  236 DAVRQLNTKAALLQSEKIDVIEERLGSLGAKMDAIAAK--SSGSSDDAKRDQKVVEMYDIAKRTEPVAEILPDIIERMQALESLHKYAMNFAKIIAEIEEKQTTITTSLVNNKELLHSVQETFAQNLEAINKEVAKVEERV 374          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: A0A6P5W331_DROOB (dynactin subunit 2 n=1 Tax=Drosophila obscura TaxID=7282 RepID=A0A6P5W331_DROOB)

HSP 1 Score: 62.4 bits (150), Expect = 1.550e-8
Identity = 36/144 (25.00%), Postives = 80/144 (55.56%), Query Frame = 1
Query:    7 DVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRLAGV 438
            + V  L ++ ++++P +LDT+ Q+      ++D +A+   S+ S+    R +K+ E +   +  + +   LP +++R+QALE+LH  + +FA+ + ++E  Q  +   L N  E L + +E+  +NL  +   V  +++R+  +
Sbjct:  235 EAVRQLSTKAALMQPDKLDTIEQRLTTLAGKMDSIAEK--SSGSAQDAKRDQKISELYDIAKRTEPVVEILPHVIERMQALESLHKYANNFAKIIAEIEQKQGTITTSLVNNKELLQSVQETFAQNLETITTKVTKVEQRVTAI 376          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: A0A034VW84_BACDO (Putative dynactin subunit 2 n=9 Tax=Tephritidae TaxID=7211 RepID=A0A034VW84_BACDO)

HSP 1 Score: 61.6 bits (148), Expect = 2.880e-8
Identity = 38/144 (26.39%), Postives = 80/144 (55.56%), Query Frame = 1
Query:    7 DVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRLAGV 438
            + V  L ++ ++L+P +LD +  +      ++D +A+   S+ S+    R +K+ E +   +  + +A  LP +++R+QALE+LH  + +FA+ + ++E  QT +   L +  E L + +E+  +NL  +N  V  ++ R+  V
Sbjct:  236 EAVHQLSTKAALLQPDKLDVIETRLTTLTGKMDAIAEK--SSGSADDAKRDQKVIELYEIAKRTEPVAEILPDIIERMQALESLHKYAMNFAKIIAEIEEKQTTIATSLVSNKELLHSVQETFAQNLETMNKEVAKVEERVQAV 377          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: A0A2D4C5G0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5G0_PYTIN)

HSP 1 Score: 57.4 bits (137), Expect = 9.100e-7
Identity = 44/146 (30.14%), Postives = 75/146 (51.37%), Query Frame = 1
Query:    1 LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASAS---SSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRL 429
            L  VV  +E RV +L    LD ++ +      EL  L K + S     + ++    +KL++ +  +     +AA +PAL+DRL  L++LH  S    +R  ++E  QT L  +L++    L    +S  EN+A+   N++ALD R+
Sbjct:  299 LISVVEEMEKRVGMLNEKNLDAVKTRTTALVHELTLLQKLKESPGVHGALNAQADREKLQQIYEKMLRVDDVAASVPALIDRLATLKSLHDDSLDLTERTRRMEQSQTRLHELLESDATLLENMEKSLEENVAVFQRNIQALDERM 444          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: A0A7R8YW98_HERIL (Hypothetical protein n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8YW98_HERIL)

HSP 1 Score: 57.0 bits (136), Expect = 1.180e-6
Identity = 37/144 (25.69%), Postives = 77/144 (53.47%), Query Frame = 1
Query:    1 LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRLA 432
            L + V  L ++ ++L+P +LD +  +     A++D +A+   ++  +  T R +K+ E     +  + I   LP +++R+QALE+LH  + +F + + ++E  Q  +   + N    L   +E+  +NL  VN  V  L++R++
Sbjct:  233 LLEAVQQLSTKAALLQPNQLDLIEARLNNLAAKMDQIAEK--ASGPNQDTQRDQKIVELHEIAKRTEPITQVLPGILERMQALESLHKYATNFTKVIAELEATQKAIASGIANNKSLLQGVQEAFAQNLENVNKEVAKLEKRIS 374          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: K3X0S5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0S5_GLOUD)

HSP 1 Score: 57.0 bits (136), Expect = 1.180e-6
Identity = 44/147 (29.93%), Postives = 77/147 (52.38%), Query Frame = 1
Query:    1 LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASAS---SSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRLA 432
            L  VVA LE RV++L    LD+++ +      E   L K + S S   + +S    +K+++ +  L++   ++  +PALVDRL  L+++H  S +   R+++VE     L  +L+     L    +S  EN+ I   N++ LD R+A
Sbjct:  230 LMSVVAQLEKRVNLLNEKNLDSIKTRTTALIHEFTLLNKLKESPSVQGALNSHADREKIQQIYDKLKSIDDVSGAVPALVDRLVTLKSIHDESLNMTARVKKVEQANETLSGLLETDTALLENIEKSLAENVKIFQSNIQTLDERMA 376          
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Match: A0A662X0L4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0L4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.690e-6
Identity = 47/148 (31.76%), Postives = 82/148 (55.41%), Query Frame = 1
Query:    1 LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASAS---SSSSTYRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQVETGQTELEVVLKNTNEGLWATRESSV-ENLAIVNDNVKALDRRLA 432
            LT VVA LE RV++L    LD ++ +      E   L+K + S     + +S     ++++ +  L +   +AA +PALVDRL AL+T+H  + +   R+ ++E  Q  L  +L +++  L A  E+S+ EN+ +   N++ LD R+A
Sbjct:  305 LTSVVAQLEQRVALLSEKNLDAVKTRTTALVHEFTLLSKLKQSPGVHGALNSQADRDQIQKIYDQLNSLDTVAASVPALVDRLVALKTVHDDALNVTARVGKMEQTQASLAELL-DSDAALLANMEASLTENVQVFQSNIQQLDDRMA 451          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11605.1412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FZ68_ECTSI1.330e-5577.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0ZPQ9_DICPU3.990e-1025.00Dynactin 50 kDa subunit n=1 Tax=Dictyostelium purp... [more]
A0A8J4PRW2_9MYCE3.520e-927.21Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A1I8NP86_STOCA1.140e-827.66Uncharacterized protein n=3 Tax=Calyptratae TaxID=... [more]
A0A6P5W331_DROOB1.550e-825.00dynactin subunit 2 n=1 Tax=Drosophila obscura TaxI... [more]
A0A034VW84_BACDO2.880e-826.39Putative dynactin subunit 2 n=9 Tax=Tephritidae Ta... [more]
A0A2D4C5G0_PYTIN9.100e-730.14Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7R8YW98_HERIL1.180e-625.69Hypothetical protein n=1 Tax=Hermetia illucens Tax... [more]
K3X0S5_GLOUD1.180e-629.93Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662X0L4_9STRA1.690e-631.76Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11605contigH-canaliculatus_F_contig11605:263..1851 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.9
Seed ortholog evalue2.7e-47
Seed eggNOG ortholog2880.D7FZ68
Preferred nameDCTN2
KEGG koko:K10424,ko:K18599
KEGG Pathwayko04962,ko05016,map04962,map05016
GOsGO:0000003,GO:0000086,GO:0000132,GO:0000226,GO:0000242,GO:0000278,GO:0000578,GO:0000775,GO:0000776,GO:0001654,GO:0001754,GO:0001894,GO:0001895,GO:0002064,GO:0002065,GO:0002066,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005869,GO:0005874,GO:0005875,GO:0005876,GO:0005938,GO:0006403,GO:0006810,GO:0006888,GO:0006897,GO:0006898,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007028,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007097,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007316,GO:0007338,GO:0007346,GO:0007350,GO:0007351,GO:0007389,GO:0007399,GO:0007423,GO:0007602,GO:0008088,GO:0008090,GO:0008092,GO:0008104,GO:0008150,GO:0008283,GO:0008298,GO:0008358,GO:0008544,GO:0008595,GO:0009314,GO:0009416,GO:0009566,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009887,GO:0009888,GO:0009913,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010001,GO:0010389,GO:0010564,GO:0010970,GO:0015629,GO:0015630,GO:0015931,GO:0016043,GO:0016192,GO:0016325,GO:0019094,GO:0019882,GO:0019884,GO:0019886,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030010,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030424,GO:0030426,GO:0030427,GO:0030507,GO:0030705,GO:0030719,GO:0030855,GO:0030951,GO:0030952,GO:0031982,GO:0032386,GO:0032388,GO:0032400,GO:0032401,GO:0032402,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0033059,GO:0033267,GO:0033365,GO:0034613,GO:0035046,GO:0035047,GO:0035088,GO:0035282,GO:0035315,GO:0040001,GO:0042063,GO:0042490,GO:0042491,GO:0042592,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043473,GO:0043583,GO:0043933,GO:0044085,GO:0044380,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045451,GO:0045494,GO:0046530,GO:0046907,GO:0048002,GO:0048193,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048592,GO:0048599,GO:0048609,GO:0048666,GO:0048699,GO:0048731,GO:0048839,GO:0048856,GO:0048869,GO:0048871,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051049,GO:0051050,GO:0051179,GO:0051234,GO:0051236,GO:0051270,GO:0051272,GO:0051293,GO:0051294,GO:0051606,GO:0051640,GO:0051641,GO:0051642,GO:0051647,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0060113,GO:0060117,GO:0060119,GO:0060249,GO:0060271,GO:0060341,GO:0060429,GO:0060563,GO:0060632,GO:0060810,GO:0060811,GO:0061245,GO:0061842,GO:0061883,GO:0065007,GO:0065008,GO:0070727,GO:0070925,GO:0071539,GO:0071702,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072583,GO:0072698,GO:0090596,GO:0097458,GO:0097711,GO:0098657,GO:0098687,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:0150034,GO:1901987,GO:1901990,GO:1902749,GO:1902850,GO:1903047,GO:1905508,GO:2001017,GO:2001019
EggNOG free text desc.motor activity
EggNOG OGsKOG3958@1,KOG3958@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDynamitin
Ec32 orthologEc-02_002280.1
Exons3
Model size453
Cds size453
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11605.1412.1prot_H-canaliculatus_F_contig11605.1412.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11605 263..1851 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928852.0508535-CDS-H-canaliculatus_F_contig11605:262..4271622928852.0508535-CDS-H-canaliculatus_F_contig11605:262..427Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11605 263..427 +
1696845588.8263783-CDS-H-canaliculatus_F_contig11605:262..4271696845588.8263783-CDS-H-canaliculatus_F_contig11605:262..427Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11605 263..427 +
1622928852.19485-CDS-H-canaliculatus_F_contig11605:769..9011622928852.19485-CDS-H-canaliculatus_F_contig11605:769..901Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11605 770..901 +
1696845588.837992-CDS-H-canaliculatus_F_contig11605:769..9011696845588.837992-CDS-H-canaliculatus_F_contig11605:769..901Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11605 770..901 +
1622928852.2053542-CDS-H-canaliculatus_F_contig11605:1695..18511622928852.2053542-CDS-H-canaliculatus_F_contig11605:1695..1851Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11605 1696..1851 +
1696845588.8485243-CDS-H-canaliculatus_F_contig11605:1695..18511696845588.8485243-CDS-H-canaliculatus_F_contig11605:1695..1851Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11605 1696..1851 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11605.1412.1

>prot_H-canaliculatus_F_contig11605.1412.1 ID=prot_H-canaliculatus_F_contig11605.1412.1|Name=mRNA_H-canaliculatus_F_contig11605.1412.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=151bp
LTDVVASLESRVSVLEPGRLDTLRQKAQLAKAELDGLAKSRASASSSSST
YRTKKLEEAFATLEAWQGIAAGLPALVDRLQALETLHLASASFAQRLEQV
ETGQTELEVVLKNTNEGLWATRESSVENLAIVNDNVKALDRRLAGVGLTV
*
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mRNA from alignment at H-canaliculatus_F_contig11605:263..1851+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11605.1412.1 ID=mRNA_H-canaliculatus_F_contig11605.1412.1|Name=mRNA_H-canaliculatus_F_contig11605.1412.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1589bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11605:263..1851+ (Hapterophycus canaliculatus Oshoro5f female)
CTGACCGATGTGGTCGCGTCGCTCGAGAGCCGCGTATCTGTCCTGGAGCC AGGCAGGTTGGACACGCTGAGGCAGAAGGCGCAGCTGGCCAAGGCCGAGC TGGACGGCTTGGCCAAGTCGCGCGCTTCGGCCTCGTCCTCGTCCTCCACT TATCGCACCAAAAAGGTGAAAGCGTCGTCCGCGCTCCGTTTGGCGTATGT GCTCTCTCGTGGCCCTTTATTGGGTCAGTCGTGTGCGTTTTGTCCTCTGG GTTCGCCGCAGTGTCGGTGTGTGTGTGTGTGTGTGTGTGCGTATGGCTTT GTGACCTCTCCAAGTCGACCGCTCCCTGGGATCGCAGAATCGGCAATCTG GTGATGACAAAAAAGCACCCGAAAAGGGCACGGCGGACTGACGCGGCCGG AGCTTTACCGCCTTTCCCGTCAGCTTGTGCAGCCCTCTGGGGCCCCCCGA ACACATCACACGTCAAACCCGCCTTGTTCCCTTGCCTGTCGTTGTTTTCG TGCCCAGTTGGAAGAGGCGTTCGCGACGCTGGAGGCGTGGCAGGGGATCG CCGCCGGCCTTCCGGCGCTCGTAGACCGCCTCCAGGCCTTGGAAACCCTG CACCTCGCGAGTGCGTCCTTCGCGCAGAGGCTCGAACAGGTGCGGGCTGC TGAGTCGCAACCGTGGGGACGGGCGTCGGTGTGATTTGGAGTACGAGTTG CCGTGGTTATTCAACTTTTTGGGCGTTCGTTGCACCCTGCGTGCACCCCG TGGCTGGATCCAGAAAGTACACGGCGCCTGTTTTCGATTATCGGTTGTGA AGGAAAGCCATGGGTTGAAACACGCCTCATTGAAAACGAACTCTGGTGCT GGCGTTTAGTGGAGGTCCGGCGTGCGCAGAGTGGAACGGAGCTTGAAAGG CGAGGTCCATCTGGTGCGCCGTGGTCCTCTTGCAGGCGGCTCAACCGTCT GACCTGTGTAAATCTAACCGGGGTTCGCGGATCGCTTTCTCTTCACGTTG CGCTATTGTACGAAAAACGAAACGGAAAGCATTCGAGGTGCCAAGCACTC GCACGCCCATCATGCTTCGAACGCGAGACTCTGGTTGGGCCGAGGCTCCC CCCGCCATGCTAATGTCTCATGCCCAATTGATGGTGGACTCGAGTAGCTA AAAATGTGTCGGCGAAGGAACGCTCTCGGCCCGTGATGTGTGGACCAAGG GGTTCTAAGAATGCTCGTCCTTCGGGTAGCGGAATCACCCGTGAATCCGG TCGTGTTTGTAGGAGTTCCGCGGAAGCCGAGCCACGCAAGGTGCTTTCGG GGGCTTTCGACAAAATAGAGACCTTAAACGAAACAAAAGCTGCACAGTGT GTTCTCATCTACCTCTGGAACCCTCTGCAGACCTGAAGACCAGCCAAACC TTTTGCGCCGCCGTGCACGCTTCACAACGCCAGGTGGAGACCGGGCAGAC CGAGCTAGAGGTCGTGCTGAAGAACACCAATGAGGGCCTCTGGGCCACCC GTGAGAGCTCGGTGGAGAACCTGGCCATCGTGAACGACAACGTAAAGGCG CTGGACCGCCGACTGGCGGGGGTCGGCTTAACTGTTTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11605:263..1851+

>mRNA_H-canaliculatus_F_contig11605.1412.1 ID=mRNA_H-canaliculatus_F_contig11605.1412.1|Name=mRNA_H-canaliculatus_F_contig11605.1412.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=906bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11605:263..1851+ (Hapterophycus canaliculatus Oshoro5f female)
CTGACCGATGTGGTCGCGTCGCTCGAGAGCCGCGTATCTGTCCTGGAGCC
AGGCAGGTTGGACACGCTGAGGCAGAAGGCGCAGCTGGCCAAGGCCGAGC
TGGACGGCTTGGCCAAGTCGCGCGCTTCGGCCTCGTCCTCGTCCTCCACT
TATCGCACCAAAAAGCTGACCGATGTGGTCGCGTCGCTCGAGAGCCGCGT
ATCTGTCCTGGAGCCAGGCAGGTTGGACACGCTGAGGCAGAAGGCGCAGC
TGGCCAAGGCCGAGCTGGACGGCTTGGCCAAGTCGCGCGCTTCGGCCTCG
TCCTCGTCCTCCACTTATCGCACCAAAAAGTTGGAAGAGGCGTTCGCGAC
GCTGGAGGCGTGGCAGGGGATCGCCGCCGGCCTTCCGGCGCTCGTAGACC
GCCTCCAGGCCTTGGAAACCCTGCACCTCGCGAGTGCGTCCTTCGCGCAG
AGGCTCGAACAGTTGGAAGAGGCGTTCGCGACGCTGGAGGCGTGGCAGGG
GATCGCCGCCGGCCTTCCGGCGCTCGTAGACCGCCTCCAGGCCTTGGAAA
CCCTGCACCTCGCGAGTGCGTCCTTCGCGCAGAGGCTCGAACAGGTGGAG
ACCGGGCAGACCGAGCTAGAGGTCGTGCTGAAGAACACCAATGAGGGCCT
CTGGGCCACCCGTGAGAGCTCGGTGGAGAACCTGGCCATCGTGAACGACA
ACGTAAAGGCGCTGGACCGCCGACTGGCGGGGGTCGGCTTAACTGTTTAG
GTGGAGACCGGGCAGACCGAGCTAGAGGTCGTGCTGAAGAACACCAATGA
GGGCCTCTGGGCCACCCGTGAGAGCTCGGTGGAGAACCTGGCCATCGTGA
ACGACAACGTAAAGGCGCTGGACCGCCGACTGGCGGGGGTCGGCTTAACT
GTTTAG
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