mRNA_H-canaliculatus_F_contig1155.1373.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5K2D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D4_9PHAE) HSP 1 Score: 277 bits (709), Expect = 2.500e-84 Identity = 129/213 (60.56%), Postives = 156/213 (73.24%), Query Frame = 1 Query: 1 VLVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFELFDLWRAGGGRAGGAEVDVVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVF 639 VLVEGDQETY+FM++AK++KPE KW++PHPGGWHI++H K LL YYGAGVE++A+LLG +DKHAA G NYRR HHLLTV G EV V WLR+R THQTL+LW PFLLEDYP+Y A RMGGR+GNYP+CV ALR LAP+ ATGKTNY++LC+ HLT LAR+P +LETIGT+F +SFS + YT F Sbjct: 470 VLVEGDQETYSFMVKAKQTKPEVCKWLIPHPGGWHILLHASKALLQLYYGAGVEAIARLLGAEDKHAADGSNYRRNHHLLTVV----------------------EGQEVSVTAWLRQRASTHQTLKLWTPFLLEDYPAYLALRMGGRTGNYPMCVMALRKLAPMVGATGKTNYVTLCINHLTTLARIPANNLETIGTLFTASFSDRDYTNYF 660
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: D7FTC0_ECTSI (Similar to solute carrier family 35, member F4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC0_ECTSI) HSP 1 Score: 269 bits (688), Expect = 2.450e-79 Identity = 132/254 (51.97%), Postives = 169/254 (66.54%), Query Frame = 1 Query: 1 VLVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFELFDLWRAGGGRAG--GA---------EVDVVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPY---TKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 VLVEGD+ETY M++ K+ PEKYKW+VPHPGGWHIM+HV K L+ RYYGAG+E VA+ LGGDD HAAAG YRR++HLLTVT+EA+W +V E + + R G GA + DVV WL+ + + H+TLR W FLL+DYP+Y FR GGR+ NY LCVA R +AP+FAATGK Y L + H+ LARM DLE + T+F+S F+ K Y VF E QEM NR+ K L R ++ ++ Sbjct: 360 VLVEGDEETYRIMVQLKKGNPEKYKWMVPHPGGWHIMLHVTKALMTRYYGAGIEVVAKALGGDDVHAAAGSKYRRSNHLLTVTYEALWWVVIEQYVAAKQKEAREGPPGAAPPAQPVDIQGDVVPWLKEQAKEHKTLRFWATFLLDDYPTYLMFRTGGRTTNYKLCVAVFRNIAPLFAATGKNRYQQLALWHMLTLARMTDSDLEAVATLFSSQFNTKNYRNFNNVFLGEIQEMMNRVVKQNLGRITQAYMTRL 613
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.140e-46 Identity = 92/243 (37.86%), Postives = 138/243 (56.79%), Query Frame = 1 Query: 4 LVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFE--LFDLWRAGGGRAGGAEV--DVVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 ++ GD+ETY M +P +Y+ + +PG WH+++H+ K +L RY+GAGVE VA+ LG D + G NYRR HH +T + A + E L L G EV VV+W+ R E+H+T +W FLL DYP+Y AFR R+GN+ L + LR +APIF TGK Y L ++HLT ++R D+ + +F+ S + ++ DE QE+ NR+ K+ R + S +K+ Sbjct: 914 ILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLSTPGDRPVEEDEVVDGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKL 1156
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5K3J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J0_9PHAE) HSP 1 Score: 167 bits (424), Expect = 5.710e-45 Identity = 91/239 (38.08%), Postives = 141/239 (59.00%), Query Frame = 1 Query: 4 LVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFELFDLWRAGGGRAGGAEVDVVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 ++ GD+ETY + ++ + Y+ + +PG WH+++H+ K LL RY+GAGVE VA+ LG D+ ++ G NYRR HH L V +EA + ++ L A A+ VV W+++R H+T LW FLL D+P+Y AFR R+G++ L + ALR +APIF TGK Y L ++ L ++RM DL+ I +F+ S S+ ++ DE Q + NR+ K+ R + SF K+ Sbjct: 202 IIAGDEETYRVLYHIQKQERMAYRQLRRYPGDWHLLLHMAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEARMSLCPKMC-LPPGEDMTAEDADSMVVAWIKKRAAEHKTFALWQQFLLHDFPAYMAFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVD-LAEMSRMSESDLKVIVKLFSVSLSKDACARLGLDERQGLTNRMYKTLTKRILPSFIHKL 438
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.930e-44 Identity = 88/243 (36.21%), Postives = 136/243 (55.97%), Query Frame = 1 Query: 4 LVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFELFDLWRAGGGRAGGAEVD-VVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNY---ISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 ++ GD+ETY M +P +Y+ + +PG WH+++H+ K +L RY+GAGVE VA+ LG D + G NYRR HH +T + A + E + VD VV+W+ R E+H+ +W FLL DYP+Y AFR R+GN+ L + LR +APIF TGK Y + L ++HLT ++R D+ + +F+ S + ++ DE QE+ NR+ K+ R + S +K+ Sbjct: 25 ILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALPVEEDKV------------VDGVVRWIVARAESHKAFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKL 255
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI) HSP 1 Score: 167 bits (424), Expect = 2.200e-44 Identity = 89/244 (36.48%), Postives = 135/244 (55.33%), Query Frame = 1 Query: 4 LVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFELFDLWRAGGGRAGGAEVD-----VVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 ++ GD+ETY M P +Y+ + +PG WH+++H+ K +L RY+GAGVE VA+ LG D + G NYRR HH +T + A + E + L E D VV+W+ R E+ +T +W FLL DYP+Y AFR R+GN+ L + LR +APIF TGK Y L ++HLT ++R D+ + +F+ S + ++ DE QE+ NR+ K+ R + S +K+ Sbjct: 155 ILGGDEETYKHMYHVMAQDPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEY-LKSLPTPSDRPVEEDKVVDGVVRWIVARAESRKTFAVWKQFLLHDYPAYIAFRTALRTGNFGLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYLRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKL 397
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 159 bits (402), Expect = 3.650e-41 Identity = 87/243 (35.80%), Postives = 132/243 (54.32%), Query Frame = 1 Query: 4 LVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVF-ELFDLWRAGGGRAGGAE--VD-VVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 ++ GD+ETY M KP +Y+ + +PG WH+++H+ K +L RY+GAGVE VA+ LG D + G NYRR HH + A + E + G R + VD VV+W+ R E+H+T +W FLL DY Y AFR R+GN+ L + LR +API TGK Y L +HLT ++ D+ + +F+ S + ++ DE +E+ NR+ K+ R + S +K+ Sbjct: 25 ILGGDEETYKHMYHVMAQKPREYRQVRRYPGDWHLLLHMAKVMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHAMAFWAAFIALCRQEYLESLPTPGDRPVEEDNVVDGVVRWIVARAESHKTFAVWKQFLLHDYHEYIAFRTALRTGNFRLRLEGLRRIAPILFVTGKDKYQFLVADHLTEVSGYSRNDMRVVSELFSVSHGPDTFARIGLDERKEVSNRLYKTLAKRILSSTIEKL 267
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5JXE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE3_9PHAE) HSP 1 Score: 146 bits (369), Expect = 4.010e-39 Identity = 81/232 (34.91%), Postives = 128/232 (55.17%), Query Frame = 1 Query: 37 MIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVF-ELFDLWRAGGGRAGGAE--VD-VVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 M + +Y+ + +PG WH+++H+ K +L RY+GAGVE VA+ LG D+ + G NYRR H +T A + E + G R + VD VV+W+ R E+H+T +W FLL DYP+Y AF R+GN+ L + LR +AP+F+ TGK Y L ++HLT ++R D+ + +F+ S + ++ DE Q + NR+ K+ R + S +K+ Sbjct: 1 MYHVMAQESSEYRQVRRYPGDWHLLLHMAKAMLTRYWGAGVEFVAKDLGIDESKSGEGSNYRRAFHHITWFLAAFMALCRQEYLKSLQTPGDRPVEEDKVVDGVVRWIVARAESHKTFAVWKQFLLHDYPAYIAFPTALRTGNFRLRLEGLRRIAPVFSITGKDKYHFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQ-VSNRLYKTLTKRILSSTIEKL 231
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5KL66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL66_9PHAE) HSP 1 Score: 150 bits (378), Expect = 9.790e-38 Identity = 65/95 (68.42%), Postives = 79/95 (83.16%), Query Frame = 1 Query: 1 VLVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFELF 285 VLVEGD+ETY M++ K+ PEKYKW++PHPGGWHIM+H+ K L+ RYYGAGVE VA+ LGGD+KHAAAG YRR+HHLLTVT+EAMW V E + Sbjct: 108 VLVEGDEETYRIMVQLKKGNPEKYKWMLPHPGGWHIMLHMTKALISRYYGAGVEVVAKALGGDNKHAAAGSKYRRSHHLLTVTYEAMWWAVIEKY 202
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Match: A0A6H5L577_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L577_9PHAE) HSP 1 Score: 128 bits (322), Expect = 2.950e-30 Identity = 80/244 (32.79%), Postives = 117/244 (47.95%), Query Frame = 1 Query: 4 LVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGAGVESVAQLLGGDDKHAAAGDNYRRTHHLLTVTFEAMWCIVFELFDLWRAGGGRAGGAEVD-----VVQWLRRRGETHQTLRLWIPFLLEDYPSYFAFRMGGRSGNYPLCVAALRTLAPIFAATGKTNYISLCMEHLTNLARMPPKDLETIGTIFASSFSRKPYTKVFGDEHQEMCNRISKSALTRAVMSFFKKV 720 ++ GD+ETY F+ + PE+Y+ + LL RY+GAGVE VA+ LG D+K + G+NYRR H+ L+ +EA W + E + A G A + D VV W+ R E H+ LW FLL+DYP+Y AFR ALRT +HL +A +P D + I +F+ + + ++ DE QE+ NR K+ R V SF +K+ Sbjct: 264 IIAGDEETYRFLYHIMKQNPEEYR----------------QALLRRYWGAGVEHVAEELGTDNKKSMDGNNYRRAHNHLSAMWEAFWAVCQEKYAEHLAEQGLAPPEDPDDFANRVVGWIEARAEVHKAFALWKQFLLDDYPAYIAFR------------TALRT------------------DHLAEMAILPESDRKVIAELFSVALGPDVFARIGLDERQEVANRFYKTMTKRIVSSFIEKL 461 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1155.1373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1155.1373.1 >prot_H-canaliculatus_F_contig1155.1373.1 ID=prot_H-canaliculatus_F_contig1155.1373.1|Name=mRNA_H-canaliculatus_F_contig1155.1373.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=240bp VLVEGDQETYAFMIEAKRSKPEKYKWIVPHPGGWHIMMHVGKGLLLRYYGback to top mRNA from alignment at H-canaliculatus_F_contig1155:24691..25410+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1155.1373.1 ID=mRNA_H-canaliculatus_F_contig1155.1373.1|Name=mRNA_H-canaliculatus_F_contig1155.1373.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=720bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1155:24691..25410+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1155:24691..25410+ >mRNA_H-canaliculatus_F_contig1155.1373.1 ID=mRNA_H-canaliculatus_F_contig1155.1373.1|Name=mRNA_H-canaliculatus_F_contig1155.1373.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1440bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1155:24691..25410+ (Hapterophycus canaliculatus Oshoro5f female)back to top |