mRNA_H-canaliculatus_F_contig1151.1336.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A6H5KPB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB3_9PHAE) HSP 1 Score: 216 bits (551), Expect = 8.040e-61 Identity = 132/174 (75.86%), Postives = 148/174 (85.06%), Query Frame = 3 Query: 1458 QVSKLGESVDILEDKLAAMERRPMDYAVGPGELARRRAALDSLRQQVSEARRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSGI 1979 Q +KLGESV+ L ++LA MERRP+D+AVG GELARRRA L++LR++V R M G XXXXXXXXXX SRLEQQRETM+EH+RMLADLGRGVGRLKTQS MINEETSLHVRLLDDMEGDAERASSGL+TEARHAEKIREKSKTFNLYVII VLS+IL IL+FSG+ Sbjct: 30 QANKLGESVEALAERLALMERRPVDFAVGHGELARRRAELETLRREVGAVRGPMGGGQXXXXX---XXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSAMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 200
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: D8LCV7_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV7_ECTSI) HSP 1 Score: 201 bits (510), Expect = 6.030e-56 Identity = 125/156 (80.13%), Postives = 135/156 (86.54%), Query Frame = 3 Query: 1512 MERRPMDYAVGPGELARRRAALDSLRQQVSEARRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSGI 1979 MERRP+D+AVG GELARRRAALD+L ++V R SM G XXXXXXXXXX SRLEQQRETM+EH+RMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGL TEARHAEKIREKSKTFNLYVII VLS+IL IL+FSG+ Sbjct: 1 MERRPVDFAVGQGELARRRAALDTLHREVGAVRGSM---GGXXXXXXXXXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLLTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 153
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A835ZEW5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW5_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.500e-27 Identity = 79/205 (38.54%), Postives = 115/205 (56.10%), Query Frame = 3 Query: 1458 QVSKLGESVDILEDKLAAMERRPMDYAVGPGELARRRAALDSLRQQVSEARRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEK-------------------------------IREKSKTFNLYVIIGVLSVILVILIFSGI 1979 Q++ ++D L ++L A E RPMD+ + ++ RRR+ L+ L QQ+ G +G+GG RL +QRE M+EH+R++ +LG+GVGRL SV+IN+E +LHVRLLDDM+ D ERA++ L E RHA+K +R+KSKTF LYV I VL+++LV+LI SG+ Sbjct: 19 QLNAAQAALDSLSNQLRAAETRPMDHGLTRVKVLRRRSQLEGLEQQLQSVGGGGGAGMRGSGSGG----------ISGRLAKQREAMQEHDRIVEELGKGVGRLHQTSVVINDEANLHVRLLDDMDEDIERANASLMQETRHAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQKSKTFWLYVTIIVLTIVLVLLIVSGL 213
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A4D9D1R7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1R7_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.190e-23 Identity = 68/190 (35.79%), Postives = 109/190 (57.37%), Query Frame = 3 Query: 1443 AKPKTQ-VSKLGESVDILEDKLAAMERRPMDYAVGPGELARRRAALDSLRQQVSE-----------ARRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSG 1976 + P TQ ++ L ++VD L+ +L ME+ P + + ++ RRR + LR Q+S A + G +G GG + +Q+RE + E + +L DLG+GV RLK Q ++I +ET +H +LL+D++GD E A+S L+ EARHA++IRE+S LY+ I +L +ILV+L+ G Sbjct: 34 SNPSTQQLANLEQTVDKLDYRLGTMEQNPGQFGISQSDVVRRRELVKGLRHQLSLLGTSSHGTNGLATGTTRDGSAASGGGG------VPGGLRTLAQQRREIIHEQDELLEDLGKGVDRLKMQGLVIRDETGIHHKLLEDIDGDVEAAASSLRMEARHAQRIREQSTVCRLYICIAILLIILVLLLVIG 217
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A7S1XYZ3_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYZ3_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.130e-21 Identity = 62/174 (35.63%), Postives = 102/174 (58.62%), Query Frame = 3 Query: 1455 TQVSKLGESVDILEDKLAAMERRPMDYAVGPGELARRRAALDSLRQQVSEARRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSG 1976 +++S L + L+ +L M ++P D+ + E+ARR++ + S ++Q+ R PG G ++Q++ M + M+AD+G+GV RL + I +ET LHVRLLD+M+ D +RA++GL+ EARHAE+IR KS+ LY+ I +LS +L++LI G Sbjct: 92 SEISVLEAEGNALDRELTEMAQKPADFFMSSSEVARRKSLIASYKEQLHNLRMGRDPGAAGADQG------------QQMKQRQKDIMALQDDMIADIGKGVDRLGNTANKIKDETQLHVRLLDEMDVDVDRATAGLRAEARHAEQIRLKSQNCYLYICIAILSCVLLLLIVLG 253
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A6G0WAN7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAN7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.690e-12 Identity = 62/181 (34.25%), Postives = 88/181 (48.62%), Query Frame = 3 Query: 1455 TQVSKLGESVDILEDKLAAMERRPMDYAVG-PGELARRRAALDSLRQQVS------EARRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSG 1976 T V L +SV L + +M P ++ P E+ RR L SL Q R + G + AG + L Q + M++ + L +G+GV LK S+ + ET LH RLLDD+ D +RA+SGL++E AE + +KS F LY+ I VLSVILV + G Sbjct: 40 TSVFALQQSVSRLRREFDSMTSGPTPNSIATPQEIRRRDDNLKSLEHQTKILLATYNNRTQGTKGASTLEAGAQM------------LRVQNQIMQDQDEQLNIIGQGVSNLKQYSLAVKNETDLHARLLDDINIDVDRATSGLESEGDRAEYVAKKSSNFRLYMAILVLSVILVFELIIG 208
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A485KLB7_9STRA (Aste57867_8788 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLB7_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.230e-11 Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 1461 VSKLGESVDILEDKLAAMERR-------PMDYAVG-PGELARRRAALDSLRQQV-----SEARRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSG 1976 V+ LG SV L+ ++ + R P AV P E+ RR L +L Q S R+ G T G L Q + M + + L +G+GV LK S+ + +ET LHVRLLDD+ D E+A++GL++E A + ++S F LY+ I VLSVILV + G Sbjct: 35 VANLGTSVFALQQSMSRLRREYDSMTSTPTSNAVATPQEIRRREDMLRTLENQTKSLLASYNNRAQGTKGASTVEAG-----------AQMLRVQNQMMLDQDEQLNMIGQGVANLKQYSLAVKDETDLHVRLLDDINVDVEKATTGLESEGDRAAILAKRSSNFRLYLAIVVLSVILVFELIIG 208
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A425D6Q0_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D6Q0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.850e-10 Identity = 58/173 (33.53%), Postives = 88/173 (50.87%), Query Frame = 3 Query: 1482 VDILEDKLAAMERRPMDYAVGPGELARRRAALDSLRQQVSEARR---SMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQR-----ETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSG 1976 +D LE+ A + + + G +A ++ +L+Q VS RR SM+ G T T A LE Q E + + + L+ +G+GV LK S+ + ET LHVRLLDD+ D +RA++GL+ E A+ + +KS F LY+ I VL+ ILV + G Sbjct: 15 LDRLEN--ARTSEKNLSTKIRSGNVANLGTSVFALQQSVSRLRREFDSMTSGST-TNAVATPQELRRREDLLRDLETQTRLTYIEILLDQDDQLSLIGQGVSNLKQYSLSVKNETDLHVRLLDDINVDVDRATTGLEAEGDRAQILAKKSSNFRLYLAIVVLTAILVFELIIG 184
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: A0A024TYR3_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYR3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.660e-9 Identity = 58/181 (32.04%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 1455 TQVSKLGESVDILEDKLAAMERRPMDYAVG-PGELARRRAALDSLRQQVSEA------RRSMSPGGTPTGAGGRXXXXXXXXXXXSRLEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSG 1976 T V L +S+ L + AM P AV P E+ RR L +L Q R + G + +G + L Q + M + + L +G+GV LK S+ + E LHVRLLDD+ + +RA++GL++E A+ + +KS F LY+ I VLS ILV + G Sbjct: 42 TSVFALQQSMSRLRREYDAMTSGPTSNAVATPQEIRRREDLLRNLETQTKSLLAAYNNRTQGTKGSSSLESGAQM------------LRVQNQIMLDQDDQLHLIGQGVSNLKQYSLAVKNEADLHVRLLDDINIEVDRATTGLESEGDRAQVLAKKSSNFRLYLAIVVLSAILVFELIIG 210
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Match: W4FTN5_9STRA (t-SNARE coiled-coil homology domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTN5_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.480e-9 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 1695 LEQQRETMREHERMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAEKIREKSKTFNLYVIIGVLSVILVILIFSG 1976 L Q + M + + L+ +G+GV LK S+ + ET LHVRLLDD+ D +RA++GL+ E A+ + +KS F LY+ I VL+ ILV + G Sbjct: 139 LRVQNQIMLDQDDQLSLIGQGVSNLKQYSLSVKNETDLHVRLLDDINVDVDRATTGLEAEGDRAQILAKKSSNFRLYLAIVVLTAILVFELIIG 232 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1151.1336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1151.1336.1 >prot_H-canaliculatus_F_contig1151.1336.1 ID=prot_H-canaliculatus_F_contig1151.1336.1|Name=mRNA_H-canaliculatus_F_contig1151.1336.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=157bp MERRPMDYAVGPGELARRRAALDSLRQQVSEARRSMSPGGTPTGAGGRAGback to top mRNA from alignment at H-canaliculatus_F_contig1151:6861..13889+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1151.1336.1 ID=mRNA_H-canaliculatus_F_contig1151.1336.1|Name=mRNA_H-canaliculatus_F_contig1151.1336.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7029bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1151:6861..13889+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1151:6861..13889+ >mRNA_H-canaliculatus_F_contig1151.1336.1 ID=mRNA_H-canaliculatus_F_contig1151.1336.1|Name=mRNA_H-canaliculatus_F_contig1151.1336.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=942bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1151:6861..13889+ (Hapterophycus canaliculatus Oshoro5f female)back to top |