mRNA_H-canaliculatus_F_contig11480.1306.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11480.1306.1
Unique NamemRNA_H-canaliculatus_F_contig11480.1306.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A0A0RTZ6_SACJA (Phosphomannomutase n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A0RTZ6_SACJA)

HSP 1 Score: 299 bits (765), Expect = 1.080e-100
Identity = 147/174 (84.48%), Postives = 154/174 (88.51%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            + VV  + LP     L   VMEDYDYSFSQNGLVAYK G LI +QTISKHVGE+NLKKIINWVLKYMS IDIPVKRGTFIEFRTGMLNISPVGRNCSQ ERDAFEQYD+ HKIRE MVAAMREEFA+LNLTFSIGGQISFDLFPTGWDKTFCLQFLGEG +EYDEIHFFGDKTF
Sbjct:   43 IGVVGGSDLPKQKEQLGESVMEDYDYSFSQNGLVAYKAGELIGQQTISKHVGEENLKKIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQEERDAFEQYDNVHKIRETMVAAMREEFADLNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTAEYDEIHFFGDKTF 216
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BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A7S1Y4G5_9STRA (Phosphomannomutase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y4G5_9STRA)

HSP 1 Score: 247 bits (630), Expect = 3.200e-80
Identity = 115/174 (66.09%), Postives = 145/174 (83.33%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L   + + + Y+FSQNGLVAYK G L+  QTISKH+GEDN+K+I+NW LKY+SD+DIPVKRGTFIEFR+GM+NISP+GRNCS+ ER+ +E++D EH IR+ MV AM++EFAELNLTFSIGGQISFD+FPTGWDKT+CL+FL EG  ++DE+HFFGDKTF
Sbjct:   42 VGIVGGSDLPKQEEQLGEGIAKVFPYNFSQNGLVAYKNGELLEIQTISKHLGEDNIKRIVNWTLKYLSDVDIPVKRGTFIEFRSGMMNISPIGRNCSRPERNDYEKFDLEHNIRKNMVEAMKKEFAELNLTFSIGGQISFDVFPTGWDKTYCLKFLAEG--DFDEVHFFGDKTF 213
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BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A835Z1B0_9STRA (Phosphomannomutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B0_9STRA)

HSP 1 Score: 241 bits (614), Expect = 9.190e-78
Identity = 110/155 (70.97%), Postives = 135/155 (87.10%), Query Frame = 1 
Query:   58 VMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            VM+ YD++FS+NGLVAYK GV I   +I+ H+GE+NLK+I+NWVL Y+S +DIP+KRGTFIEFRTGMLNISP+GRNCS +ERD FE+YD EHK+R  MV AM++EF +L LTFSIGGQISFDLFPTGWDKT+CL++L EG  ++DEIHFFGDKTF
Sbjct:   61 VMDCYDWNFSENGLVAYKDGVPIGRTSITDHLGEENLKRIVNWVLGYLSKVDIPIKRGTFIEFRTGMLNISPIGRNCSHAERDEFEKYDLEHKVRATMVKAMQDEFGDLGLTFSIGGQISFDLFPTGWDKTYCLRYLPEG--DFDEIHFFGDKTF 213
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BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A7S2N171_9STRA (Phosphomannomutase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N171_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.210e-76
Identity = 111/174 (63.79%), Postives = 145/174 (83.33%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L   V++ + Y+FSQNGLVAYK G L+  QTISK +GEDN+KKI+NWV+KY++++DIPVKRGTFIEFR+GM+NISPVGRNCS+ ER+ +E++D EH IR+ MV AM++EFA+LNLT+SIGGQISFD+FPTGWDKT+CLQF+ +   ++DE+HFFGDKTF
Sbjct:   57 VGIVGGSDLPKQEEQLGQGVVKLFPYNFSQNGLVAYKDGELMEVQTISKFLGEDNIKKIVNWVMKYLAEVDIPVKRGTFIEFRSGMMNISPVGRNCSREERNDYEKFDLEHNIRKNMVEAMKKEFADLNLTYSIGGQISFDVFPTGWDKTYCLQFIKK--EDFDEVHFFGDKTF 228
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BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A6U1NX74_CYCTE (Phosphomannomutase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1NX74_CYCTE)

HSP 1 Score: 236 bits (601), Expect = 9.230e-76
Identity = 110/174 (63.22%), Postives = 143/174 (82.18%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L + ++  + Y+FSQNGLVAYK G L+  QTI+K +GEDN+K+I+NWV+KY++DIDIPVKRGTFIEFR+GM NISP+GRNCS+ ER+ +E++D EH IR+ MV AM++EFA+LNLTFSIGGQISFD+FP+GWDKT+CL+FL     E+DE+HFFGDKTF
Sbjct:   46 VGIVGGSDLPKQEEQLGSGIVNLFPYNFSQNGLVAYKDGELLERQTIAKFLGEDNVKRIVNWVMKYLADIDIPVKRGTFIEFRSGMFNISPIGRNCSRPERNEYEKFDLEHGIRKTMVEAMKKEFADLNLTFSIGGQISFDVFPSGWDKTYCLKFLNP--DEFDEVHFFGDKTF 217
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BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A7S4NE94_9STRA (Phosphomannomutase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE94_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.190e-75
Identity = 108/174 (62.07%), Postives = 144/174 (82.76%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L   V++ + Y+FSQNGLVAYK G ++  QTISKH+GEDN+K+I+NW +KY++D+D+PVKRGTFIEFR+GM+NISPVGRNCS+ ER+ +E++D  + +R+ MVAAM++EFA+LNLTFSIGGQISFD+FP GWDKT+CLQF+ E   ++DE+HFFGDKTF
Sbjct:   65 VGIVGGSDLPKQEEQLGDGVVKMFPYNFSQNGLVAYKDGEILEIQTISKHLGEDNIKRIVNWTMKYLADVDVPVKRGTFIEFRSGMMNISPVGRNCSREERNDYEKFDLANNVRKNMVAAMQKEFADLNLTFSIGGQISFDVFPNGWDKTYCLQFIKE--EDFDEVHFFGDKTF 236
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A7S2QZN1_9STRA (Phosphomannomutase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZN1_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.090e-75
Identity = 109/174 (62.64%), Postives = 143/174 (82.18%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L   +++ + ++FSQNGLVAY+ G ++  QTISKH+GE NLKK++NWV+KY++D+D+P+KRGTFIEFRTGM NISP+GRNCS+ ER+ +E++D EH IR+ MV AM++EFA+LNLTFSIGGQISFD+FP GWDKT+ L+FL E  S+YDEIHFFGDKTF
Sbjct:   64 VGIVGGSDLPKQQEQLGNGIVDVFPFNFSQNGLVAYQDGKVLEIQTISKHLGEANLKKLVNWVMKYLADVDLPIKRGTFIEFRTGMFNISPIGRNCSREERNDYEKFDLEHNIRKNMVEAMKKEFADLNLTFSIGGQISFDVFPVGWDKTYSLKFLKE--SDYDEIHFFGDKTF 235
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BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A1Z5JWJ9_FISSO (Phosphomannomutase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWJ9_FISSO)

HSP 1 Score: 233 bits (595), Expect = 7.050e-75
Identity = 108/174 (62.07%), Postives = 140/174 (80.46%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L   ++ D+ ++FSQNGLVAYK G L   QT+SK +GEDN+K+I+NWV+KY++D+DIPVKRGTFIEFR+GM NISP+GRNCS+ ERD +E +D +H +R+ MV AM++EFA+L LT+SIGGQISFD+FP GWDKT+CL+FL E   +YDEIHFFGDKTF
Sbjct:   44 VGIVGGSDLPKQQEQLGNGIVNDFPWNFSQNGLVAYKNGELQEVQTLSKFLGEDNVKRIVNWVMKYLADLDIPVKRGTFIEFRSGMFNISPIGRNCSREERDEYEVFDLKHNVRKNMVEAMKKEFADLGLTYSIGGQISFDVFPNGWDKTYCLRFLKE--EDYDEIHFFGDKTF 215
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A7S3PZ64_9STRA (Phosphomannomutase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ64_9STRA)

HSP 1 Score: 234 bits (596), Expect = 9.100e-75
Identity = 109/174 (62.64%), Postives = 143/174 (82.18%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L   +++ + Y+FSQNGLVAYK G ++  QTISK +GE+N+KK++NWV+KY++D+DIP+KRGTFIEFR+GM NISP+GRNCS+ ER+ FE++D EH IR+ MVAAMR+EFA+L LT+SIGGQISFD+FP GWDKT+ L+FL EG  ++DEIHFFGDKTF
Sbjct:   59 VGIVGGSDLPKQEEQLGDGIVKTFPYNFSQNGLVAYKDGEMLEIQTISKFLGEENIKKLVNWVMKYLADVDIPIKRGTFIEFRSGMFNISPIGRNCSRVERNDFEKFDLEHNIRKDMVAAMRKEFADLGLTYSIGGQISFDVFPVGWDKTYSLKFLPEG--DFDEIHFFGDKTF 230
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Match: A0A7S2XTA7_9STRA (Phosphomannomutase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTA7_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.010e-74
Identity = 108/174 (62.07%), Postives = 139/174 (79.89%), Query Frame = 1 
Query:    1 VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKHVGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSERDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGNSEYDEIHFFGDKTF 522
            V +V  + LP     L   +   + Y+FSQNGLVAYK G L+  QTISKH+GEDN+K+++NWV+KY++D+D+P+KRGTFIEFR+GM NISP+GRNCS+ ER+ +E +D  + IR+ MVAAM+ EFA+LNLTFSIGGQISFD+FP GWDKT+CL FL  G  ++DEIHFFGDKTF
Sbjct:   45 VGIVGGSDLPKQEEQLGDGIANVFPYNFSQNGLVAYKSGELLEIQTISKHLGEDNVKRLVNWVMKYLADVDLPIKRGTFIEFRSGMFNISPIGRNCSREERNDYETFDLANNIRKNMVAAMQTEFADLNLTFSIGGQISFDVFPKGWDKTYCLNFLDAG--DFDEIHFFGDKTF 216
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11480.1306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A0RTZ6_SACJA1.080e-10084.48Phosphomannomutase n=2 Tax=Phaeophyceae TaxID=2870... [more]
A0A7S1Y4G5_9STRA3.200e-8066.09Phosphomannomutase n=2 Tax=Grammatophora oceanica ... [more]
A0A835Z1B0_9STRA9.190e-7870.97Phosphomannomutase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2N171_9STRA2.210e-7663.79Phosphomannomutase n=1 Tax=Helicotheca tamesis Tax... [more]
A0A6U1NX74_CYCTE9.230e-7663.22Phosphomannomutase n=1 Tax=Cyclophora tenuis TaxID... [more]
A0A7S4NE94_9STRA1.190e-7562.07Phosphomannomutase n=1 Tax=Odontella aurita TaxID=... [more]
A0A7S2QZN1_9STRA3.090e-7562.64Phosphomannomutase (Fragment) n=1 Tax=Eucampia ant... [more]
A0A1Z5JWJ9_FISSO7.050e-7562.07Phosphomannomutase n=2 Tax=Fistulifera solaris Tax... [more]
A0A7S3PZ64_9STRA9.100e-7562.64Phosphomannomutase n=2 Tax=Chaetoceros debilis Tax... [more]
A0A7S2XTA7_9STRA2.010e-7462.07Phosphomannomutase n=1 Tax=Attheya septentrionalis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11480contigH-canaliculatus_F_contig11480:503..4068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.4
Seed ortholog evalue4.5e-78
Seed eggNOG ortholog2880.D7FWW3
Preferred namePMM
KEGG rclassRC00408
KEGG koko:K07541,ko:K17497
KEGG ReactionR01818,R05919
KEGG Pathwayko00051,ko00520,ko00563,ko01100,ko01110,ko01130,map00051,map00520,map00563,map01100,map01110,map01130
KEGG ModuleM00114
GOsGO:0003674,GO:0003824,GO:0004615,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006013,GO:0006082,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006605,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006970,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009108,GO:0009110,GO:0009225,GO:0009226,GO:0009298,GO:0009628,GO:0009651,GO:0009987,GO:0010494,GO:0015031,GO:0015833,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019318,GO:0019438,GO:0019538,GO:0019673,GO:0019752,GO:0019852,GO:0019853,GO:0031012,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036211,GO:0036464,GO:0042364,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043413,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045047,GO:0045184,GO:0046364,GO:0046394,GO:0046483,GO:0046907,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0055086,GO:0062039,GO:0062040,GO:0070085,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.phosphomannomutase activity
EggNOG OGsCOG0561@1,KOG3189@2759
EC5.4.2.8
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal peptide
Exons5
Model size522
Cds size522
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11480.1306.1prot_H-canaliculatus_F_contig11480.1306.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11480 503..4068 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928832.0195062-CDS-H-canaliculatus_F_contig11480:502..6371622928832.0195062-CDS-H-canaliculatus_F_contig11480:502..637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 503..637 +
1696845582.369141-CDS-H-canaliculatus_F_contig11480:502..6371696845582.369141-CDS-H-canaliculatus_F_contig11480:502..637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 503..637 +
1622928832.0325668-CDS-H-canaliculatus_F_contig11480:1411..15031622928832.0325668-CDS-H-canaliculatus_F_contig11480:1411..1503Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 1412..1503 +
1696845582.3835037-CDS-H-canaliculatus_F_contig11480:1411..15031696845582.3835037-CDS-H-canaliculatus_F_contig11480:1411..1503Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 1412..1503 +
1622928832.0445137-CDS-H-canaliculatus_F_contig11480:2720..28201622928832.0445137-CDS-H-canaliculatus_F_contig11480:2720..2820Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 2721..2820 +
1696845582.3918076-CDS-H-canaliculatus_F_contig11480:2720..28201696845582.3918076-CDS-H-canaliculatus_F_contig11480:2720..2820Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 2721..2820 +
1622928834.6099036-CDS-H-canaliculatus_F_contig11480:3440..35481622928834.6099036-CDS-H-canaliculatus_F_contig11480:3440..3548Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 3441..3548 +
1696845582.4000025-CDS-H-canaliculatus_F_contig11480:3440..35481696845582.4000025-CDS-H-canaliculatus_F_contig11480:3440..3548Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 3441..3548 +
1622928834.714248-CDS-H-canaliculatus_F_contig11480:3981..40681622928834.714248-CDS-H-canaliculatus_F_contig11480:3981..4068Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 3982..4068 +
1696845582.4147346-CDS-H-canaliculatus_F_contig11480:3981..40681696845582.4147346-CDS-H-canaliculatus_F_contig11480:3981..4068Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11480 3982..4068 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11480.1306.1

>prot_H-canaliculatus_F_contig11480.1306.1 ID=prot_H-canaliculatus_F_contig11480.1306.1|Name=mRNA_H-canaliculatus_F_contig11480.1306.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=174bp
VAVVAAAPLPAPSLGLRTPVMEDYDYSFSQNGLVAYKGGVLIAEQTISKH
VGEDNLKKIINWVLKYMSDIDIPVKRGTFIEFRTGMLNISPVGRNCSQSE
RDAFEQYDHEHKIREKMVAAMREEFAELNLTFSIGGQISFDLFPTGWDKT
FCLQFLGEGNSEYDEIHFFGDKTF
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mRNA from alignment at H-canaliculatus_F_contig11480:503..4068+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11480.1306.1 ID=mRNA_H-canaliculatus_F_contig11480.1306.1|Name=mRNA_H-canaliculatus_F_contig11480.1306.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3566bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11480:503..4068+ (Hapterophycus canaliculatus Oshoro5f female)
GTCGCCGTCGTCGCCGCCGCTCCCCTCCCTGCACCCTCCCTCGGTTTGCG
GACGCCAGTTATGGAGGACTACGACTACAGCTTCTCGCAAAACGGACTCG
TGGCGTACAAGGGAGGGGTGCTGATCGCAGAACAGGTTCGGCGATGCATG
TTGCTCCAAGGGCTTCGTCGTGGACTTGATGCATGTGTCTGGTGTGCGGA
CCGGCGTCATCGCGCCCGTTCTCGCCGCCGTTAAAGGTTCTCCTTGTCCT
GTAACATCATCGTCCACATTTTTGTTCCGGTCGGCGCTGCGCCGGTCCTC
CAGTTTTTGCTCGTTGGCCCGTTAGCCCGTCTGCGTCCTGTTCCCCCTGC
GAGCCGGGGCTTGCCTCCACGAAACGTTGGCCTATCGGTACACAGCAGTG
TCGAGGTCGAAGTAGAGACGAGTGCCAAAACAGTCAGCAGTATTGTCAAC
GCCAGCGTTCCGTAGCCAAGAGGAAAACCCTGTGAACCGGTGGACGCGAA
CCCCCGACATCGGTGGCACAAACGCGTTGCTCGAGTCCGTCCGGATTGCC
CGCTCTCTCGAGATTCACGCGCGCGCAAGTGTCCGTGCTCGTCTCTCCGA
CGCGCTCGGAACATGTCCTTTTAAGAGAACGTCCCCCGGGTCCGCCCGGA
AGCTGATCCGATGCCACTCCGATCGGACGGGCGACCACTCGAAACAAGCC
GCCCGAAAGAAAAAGGGCCCTTGAGGCGTGTTTCGTGTTGCGCGCTTCTG
CATTTCTCTCGTTCTGGAGGAGTGTCGGTTTTGGGTTGACGGCGACTTCG
GGGGCGTTGATGCCGGCTTGGCGCGGCCACGTGCCGTGCCTTGTCTCGTC
GCGTGGGAGCTGAATCTCAAGCGTGGCTCGTTCGCCCCTCTCGCCGCCGT
CACCCGCAGACGATTTCGAAGCACGTCGGGGAGGACAACCTCAAGAAGAT
CATCAACTGGGTGCTGAAGTACATGTCGGATATCGACATCCCCGTGAAGA
GGTGAGAGAGGAAGCGCGCAGATCCTCGAGAGAGGAGGAGAGTTTTTTTG
TTTCTTCCCTCCCACGTGTCGGAAAGCTCGTCGGTCGCGAGAAGAATCCG
AAGAAGTATATCGTCTTGTCCGGAGGTTGTCGAGTTTTTTCCTTCTGTCC
CCAGTTGCGGAAGAAGAAGGACGGGAGCTCAGTAAGCACGGCACAGACTA
CAGGAGTTGCACGGTCAACCGGTGTTCGCTCGCGAGCGCGGCGCAAATTG
AAGAACGCCAAAAGGCGCTCGCCCGATCCCGCAAGGGCTCAGGGGAACAA
TCTTTCTACGACGGGCCTTGCGGGCTCGGCGGGTCACCCCTCGGATTTGA
CGGGAACAGGGAAAATTCAAAATACGAGGGGGCACATTTGCGGCCCATTT
CCGACAGAAAGCCGGCAGCGCTTCGCAACGGCCGTACGATACATCGTGTG
TGGGTCCGGGATCAAAAGCCGGTTCAACTTCTTCGATCTTATTGAACGCA
CCCATATGGAAGGCATGCATGGAGGCCGACGTGGCCGTTGTCCGAGGAGG
GGGGTGGGGGAAACGATGAGTTCCGCAACGCATCACCTCACGCAGAGGCC
ACCTGCGACGTTCGTCGTTGTGTACCCCCGCCGGCTGTCGTCCTCAGCTC
TCCCCCGAGTCCGGGCCATTTCGTTTTGCTCGTCAGACGTCCTGTTGTCG
AAAATCTGCGCCTGTCCGGAGGAGTTCGACTCAGCCTCCCCCTTAGCACG
CCGAAACACACACACATAATCGCCCGTCCCCTAGTATCGAGAGACCCGTG
ACAGTGTCTTGATCGTGTTCGCCTCCTCGCCCTCTTGTGCTTCCGATCAT
CTCTCGAACACGTGCGGGCACCCAGCGCGAAGAAAACGAATCGTTTCTTC
GCGTCGCATCACAGACAGGGAGTATTTAAAAGAAAACATTTCTCGAGAAA
CTACACTAACATCTATTGTTTCGCTTCCCATAGTTATTCAAGATCCATCA
CAACATTTGCGGTAAGTTACACAAAACTCTGTCCTGTTCATGCTTGTGTC
CCCATCAATGAAACCTCACTGTTTTGAACTCAACAGAAGCCTCGGGGTAC
GCCTCACACGACGAACCTCAGGAGGTGTTCTAACGGTGTTGTTTTGTTTT
CTTTAAAATAAAATCCCACCTAAACGATCGAGAGTTTACCCGACCGCGCC
GTCGTTCCGTTGTGACAGGGGAACCTTCATCGAGTTCCGGACGGGCATGC
TCAACATCTCCCCCGTCGGCCGAAACTGCAGCCAGTCGGAGCGAGACGCG
TTCGAGCAGTACGACCACGTAAGGAGGCTACGCGGTGTTTGTCCTTCGGT
CTCAAGCCGGTCTGTAGGATGGCGGATCTTGTTCTCCTGCTGCTGCCGCT
GCCGCTGAACATAGCCTCGTGTCGTACGTAGGTCTTCTCCTCGCTCGCCC
TTTTTAAAGAAAACATAACAACACCGTTAGAACACCTCCTGAGGTACGTC
GTGTGAGGCGTACCTCAAGGCTTCTGTTGAGTTCACAACAGTGAGGGTTC
ACTGATGGGGACAAAAGTATGAACAGGAGAAAGTTTGTGCGTAACTTACC
GCAAATGTTGTGATGGATGATGAACAACTATGGGAAGCCTTTGTCGGAGT
TCCCTCCGAATGCTGCCCCTGCATGGTCGCTTCTAACGGCCGCCATCCTT
GCCCCGCGAAACACTTGCCGACGACGACCTCGCGGATAAATTGGCAACAA
CCAAGCGTACTGTAGCGAATCCCACAAGCCTAGTTCATCGCACAAAAACG
TGTCACGGGCCGCTCGGCGCCCTGAACCCGACCGAAAGATCTACACAAAA
ATGACGCTGAGTGTTGTCCTCGTGACACGTTTAACCCGGTTTCTTCCTCG
AAATGCGTCCACTACTCCGCGGGGAATGAATTTCACAGGAGCACAAGATC
CGGGAGAAGATGGTGGCGGCCATGCGGGAGGAGTTTGCAGAGCTGAACCT
CACCTTCTCGATCGGGGGGCAAATCTCCTTCGACCTGTTCCCCACGGTGC
GTGCATCTTCCTCGATGCCGTCGTTGCTGATGCCGCTCTGGTGGGCTTTT
TTGTTCTTTTCTAGCTCTACGGAGTTGCCGCCGGCCAACGTTGCCGATTG
TGCCTCGTGTTTTCGAGCTGCCTGCCCGTCGAGCAAGGGGTCTCACCCGG
TCTCCATGCAGCAGCAGAGGGGGGATCGTTTCCCCACTTGTCCGTGGCGT
TCTTCTCGCTCGATTGTGTTTTTGATGAAAGATAGAAGAGGTACCTTTTT
TGGTCCATCTAACCCGGATTGATCGATTTCTTTTCTTCTGGTCCGAACGC
ACAACTCATTTCCGGGAAGCATTTTCTCCCCCCCAACGCCACCTGCTTTC
CCTCCTGCTGCTGCTGTGTCACTGACGAGAACCGCATGATTTCCGCCTCC
TCGTCGTCGCTCCAAAAAAAATCGAGAAGGGATGGGACAAGACGTTCTGC
TTGCAGTTCTTGGGTGAGGGCAACAGCGAGTACGACGAGATCCACTTCTT
CGGTGACAAGACCTTC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11480:503..4068+

>mRNA_H-canaliculatus_F_contig11480.1306.1 ID=mRNA_H-canaliculatus_F_contig11480.1306.1|Name=mRNA_H-canaliculatus_F_contig11480.1306.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1044bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11480:503..4068+ (Hapterophycus canaliculatus Oshoro5f female)
GTCGCCGTCGTCGCCGCCGCTCCCCTCCCTGCACCCTCCCTCGGTTTGCG
GACGCCAGTTATGGAGGACTACGACTACAGCTTCTCGCAAAACGGACTCG
TGGCGTACAAGGGAGGGGTGCTGATCGCAGAACAGGTCGCCGTCGTCGCC
GCCGCTCCCCTCCCTGCACCCTCCCTCGGTTTGCGGACGCCAGTTATGGA
GGACTACGACTACAGCTTCTCGCAAAACGGACTCGTGGCGTACAAGGGAG
GGGTGCTGATCGCAGAACAGACGATTTCGAAGCACGTCGGGGAGGACAAC
CTCAAGAAGATCATCAACTGGGTGCTGAAGTACATGTCGGATATCGACAT
CCCCGTGAAGAGACGATTTCGAAGCACGTCGGGGAGGACAACCTCAAGAA
GATCATCAACTGGGTGCTGAAGTACATGTCGGATATCGACATCCCCGTGA
AGAGGGGAACCTTCATCGAGTTCCGGACGGGCATGCTCAACATCTCCCCC
GTCGGCCGAAACTGCAGCCAGTCGGAGCGAGACGCGTTCGAGCAGTACGA
CCACGGGAACCTTCATCGAGTTCCGGACGGGCATGCTCAACATCTCCCCC
GTCGGCCGAAACTGCAGCCAGTCGGAGCGAGACGCGTTCGAGCAGTACGA
CCACGAGCACAAGATCCGGGAGAAGATGGTGGCGGCCATGCGGGAGGAGT
TTGCAGAGCTGAACCTCACCTTCTCGATCGGGGGGCAAATCTCCTTCGAC
CTGTTCCCCACGGAGCACAAGATCCGGGAGAAGATGGTGGCGGCCATGCG
GGAGGAGTTTGCAGAGCTGAACCTCACCTTCTCGATCGGGGGGCAAATCT
CCTTCGACCTGTTCCCCACGGGATGGGACAAGACGTTCTGCTTGCAGTTC
TTGGGTGAGGGCAACAGCGAGTACGACGAGATCCACTTCTTCGGTGACAA
GACCTTCGGATGGGACAAGACGTTCTGCTTGCAGTTCTTGGGTGAGGGCA
ACAGCGAGTACGACGAGATCCACTTCTTCGGTGACAAGACCTTC
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