|
|
Homology
BLAST of mRNA_H-canaliculatus_F_contig1145.1281.1 vs. uniprot
Match: A0A6H5JGU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU1_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 7.230e-121 Identity = 323/743 (43.47%), Postives = 383/743 (51.55%), Query Frame = 3
Query: 1101 PRASPEPAPIPGGMSVKDRARTWQTNASXXXXXXXXXXXXXXXXXXXXXTSSLXXXXXXXXXXXXXXTIEEIEAMEKAEAEPSRAGEKTGAKGTDEICHTASSPPNDSNLSV--NRQAGKSYSRQVSRVSGTGRTAARAVTPRAVAAVAPTTVDATAAAGEALPAPQTRGRSP----RNAEQGRSSAPRKI-RRSISVDDADHRPRQARSSRRQRPIATGNGGVPSSRAVNGGR-----AGVARPANNMAGRPQQHXXXXXXXXXXXXXXXXXXXXXXXXXRTPYTAQGTPSAATXXXXXXXXXXXXXHLRIHDGP-----ASTRALGGSRNFDITS--SPPGASKATPKMRRHNSAPDMGVMDDQEDDLASPRRQAMEGSPPQACWGGGLPPTCGPAAARAAVAAAE-------------------ARA-VGESTAGSSRYPANDRESFARTLNEDELDEVWKGLGEGVSQRGAGSEVAF--EAVDNAPASPSGTGVSGAFPTLTANVLERHDQLADGSGSGGGSSGTRQ--GANVMPMPKKLGERTVEDMENGTRRSSKRSKGSGGRSEP-----QHETTLLGAIVSYGILVLWVAHLVFNVLLLWNIVDDDYIWGLCFLPGVLGILLSFNSCRKSHRHCKPA-VDEAGGRQPRPSR-RTAPHVCALPAHMLLLASVVVCLGMHASAMLFCKRDMILVFEEETLQPLCDESSLMVPIILDGVLLTVASLKASSLCWAWVLS 3179
P S PAP PG SV++RAR WQ +++ S TIEEIEAMEKA+ A A +E C T P S+L N+Q ++YSRQVSRVSGTGRTA RA TPR Q RGRSP E RS + R++ RRS+SVDD DHRP Q Q P T + G P+ RA +G +P N+ R QQ R YTA GTPSA XXXXX AS GGSRNFDI + SP AR VG ++ GS R+P++DRESFARTLN++ELDEVW GLGEGVSQRG GSEV + D P SP+GTGVSGAFP LTANVLERHDQLAD ANV+P+PK+L ER+ EDMENGT SSK+S G+G ++P Q E TLLGAI SYG+LVLWVAHLVFNVLLLW +V D+ +W LCF+PGVLGILLS N CRKSHRHCKP D+A +Q + R+APH C+LP H LLL +VVVCLG+HASA LFC++DM+LVFEEETL PLCD+SSL +P+ILDG++L+VASLKASSLCWAWVL+
Sbjct: 3 PPPSSTPAPYPGTSSVRERARAWQESSARDASPP-----------------SGSVSPPVMKEKEVPPTIEEIEAMEKADWVEVAAA---AAADQEEPCRT----PGGSSLPQLDNKQTPRTYSRQVSRVSGTGRTA-RASTPRTAXXXXXXXXXXXXXXXXXTSGTQRRGRSPPKPHHQQEISRSQSQRRLHRRSVSVDDPDHRPTQRLPRGHQHPRTTRSRGAPAGRAPAASNXXXXXSGGRQPQNSR--RVQQ-----LDNPARTTSRPSQINGGRGGGRVLYTAHGTPSATPMNSNRTKQXXXXXXXXXXXXXXXXXXASPSTRGGSRNFDIATPFSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARGGVGSTSGGSGRFPSHDRESFARTLNDEELDEVWNGLGEGVSQRGCGSEVGVGVDLADTTPPSPNGTGVSGAFPKLTANVLERHDQLADDXXXXXXXXXXXXXXAANVVPIPKQLMERSAEDMENGT--SSKKSSGNGSGNQPASGVQQQEKTLLGAIASYGVLVLWVAHLVFNVLLLWRVVADEQVWALCFVPGVLGILLSVNRCRKSHRHCKPLNTDDAQTQQRQQGLGRSAPHACSLPVHTLLLLAVVVCLGLHASAFLFCEKDMLLVFEEETLDPLCDDSSLTLPLILDGIVLSVASLKASSLCWAWVLN 711
BLAST of mRNA_H-canaliculatus_F_contig1145.1281.1 vs. uniprot
Match: D8LJV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV6_ECTSI) HSP 1 Score: 381 bits (978), Expect = 3.840e-116 Identity = 207/308 (67.21%), Postives = 239/308 (77.60%), Query Frame = 3
Query: 2295 GSSRYPANDRESFARTLNEDELDEVWKGLGEGVSQRGAGSEVA--FEAVDNAPASPSGTGVSGAFPTLTANVLERHDQLADGSGSGGGSSGTRQGA----NVMPMPKKLGERTVEDMENGTRRSSKRSKGSGGRSEP-----QHETTLLGAIVSYGILVLWVAHLVFNVLLLWNIVDDDYIWGLCFLPGVLGILLSFNSCRKSHRHCKP--AVDEAGGRQPRPSRRTAPHVCALPAHMLLLASVVVCLGMHASAMLFCKRDMILVFEEETLQPLCDESSLMVPIILDGVLLTVASLKASSLCWAWVLS 3179
GS R+P++DRESFARTLN +ELDEVWKGLGEGVSQRG GSEV F+ D P SP+GTGVSGAFP LTANVLERHDQLAD NV+P+PKKL ER+ EDMENGT SSK+S G+G ++P Q E TLLGAIVSYG+LVLWV HLVFNVLLLW +V D+ +W LCFLPGVLGILLS NSCRKSHR CKP A D R+ R R+APH CALPAH LLL +VVVCLG+HASA+LFC++DM+LVFEEETL PLCD+SSL +P+ILD ++L+VASLKASSLCWAWVL+
Sbjct: 79 GSGRFPSHDRESFARTLNNEELDEVWKGLGEGVSQRGCGSEVGVGFDLADTTPPSPNGTGVSGAFPKLTANVLERHDQLADDXXXXXXXXXXXXXXXXXXNVVPIPKKLMERSAEDMENGT--SSKKSSGNGNGNQPASGVQQQEKTLLGAIVSYGVLVLWVGHLVFNVLLLWRVVADEQVWALCFLPGVLGILLSVNSCRKSHRRCKPLNADDAQTQRRQRGRERSAPHACALPAHTLLLLAVVVCLGLHASALLFCEKDMLLVFEEETLDPLCDDSSLALPLILDAIVLSVASLKASSLCWAWVLN 384
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-01_009830.1 |
| Exons | 4 |
| Model size | 4746 |
| Cds size | 2091 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928829.2438104-UTR-H-canaliculatus_F_contig1145:15192..15713 | 1622928829.2438104-UTR-H-canaliculatus_F_contig1145:15192..15713 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1145 15193..15713 + |
| 1696845581.1023197-UTR-H-canaliculatus_F_contig1145:15192..15713 | 1696845581.1023197-UTR-H-canaliculatus_F_contig1145:15192..15713 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1145 15193..15713 + |
| 1622928829.2597816-UTR-H-canaliculatus_F_contig1145:15769..16339 | 1622928829.2597816-UTR-H-canaliculatus_F_contig1145:15769..16339 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1145 15770..16339 + |
| 1696845581.1120317-UTR-H-canaliculatus_F_contig1145:15769..16339 | 1696845581.1120317-UTR-H-canaliculatus_F_contig1145:15769..16339 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1145 15770..16339 + |
| 1622928829.3207245-UTR-H-canaliculatus_F_contig1145:19824..21388 | 1622928829.3207245-UTR-H-canaliculatus_F_contig1145:19824..21388 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1145 19825..21388 + |
| 1696845581.1497698-UTR-H-canaliculatus_F_contig1145:19824..21388 | 1696845581.1497698-UTR-H-canaliculatus_F_contig1145:19824..21388 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1145 19825..21388 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928829.2773197-CDS-H-canaliculatus_F_contig1145:16339..18024 | 1622928829.2773197-CDS-H-canaliculatus_F_contig1145:16339..18024 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1145 16340..18024 + |
| 1696845581.122448-CDS-H-canaliculatus_F_contig1145:16339..18024 | 1696845581.122448-CDS-H-canaliculatus_F_contig1145:16339..18024 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1145 16340..18024 + |
| 1622928829.291179-CDS-H-canaliculatus_F_contig1145:18769..19025 | 1622928829.291179-CDS-H-canaliculatus_F_contig1145:18769..19025 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1145 18770..19025 + |
| 1696845581.132122-CDS-H-canaliculatus_F_contig1145:18769..19025 | 1696845581.132122-CDS-H-canaliculatus_F_contig1145:18769..19025 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1145 18770..19025 + |
| 1622928829.3051353-CDS-H-canaliculatus_F_contig1145:19674..19824 | 1622928829.3051353-CDS-H-canaliculatus_F_contig1145:19674..19824 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1145 19675..19824 + |
| 1696845581.140941-CDS-H-canaliculatus_F_contig1145:19674..19824 | 1696845581.140941-CDS-H-canaliculatus_F_contig1145:19674..19824 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1145 19675..19824 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1145.1281.1 >prot_H-canaliculatus_F_contig1145.1281.1 ID=prot_H-canaliculatus_F_contig1145.1281.1|Name=mRNA_H-canaliculatus_F_contig1145.1281.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=697bp
MSSPRASPEPAPIPGGMSVKDRARTWQTNASPSPSPSPSPSPSPSPSPSP
SPTSSLPRPTPVETETTPPPTIEEIEAMEKAEAEPSRAGEKTGAKGTDEI
CHTASSPPNDSNLSVNRQAGKSYSRQVSRVSGTGRTAARAVTPRAVAAVA
PTTVDATAAAGEALPAPQTRGRSPRNAEQGRSSAPRKIRRSISVDDADHR
PRQARSSRRQRPIATGNGGVPSSRAVNGGRAGVARPANNMAGRPQQHQHQ
QQQRRRVQQQNKPRPQAATGRGRTPYTAQGTPSAATANNRQQQQQQQQQH
LRIHDGPASTRALGGSRNFDITSSPPGASKATPKMRRHNSAPDMGVMDDQ
EDDLASPRRQAMEGSPPQACWGGGLPPTCGPAAARAAVAAAEARAVGEST
AGSSRYPANDRESFARTLNEDELDEVWKGLGEGVSQRGAGSEVAFEAVDN
APASPSGTGVSGAFPTLTANVLERHDQLADGSGSGGGSSGTRQGANVMPM
PKKLGERTVEDMENGTRRSSKRSKGSGGRSEPQHETTLLGAIVSYGILVL
WVAHLVFNVLLLWNIVDDDYIWGLCFLPGVLGILLSFNSCRKSHRHCKPA
VDEAGGRQPRPSRRTAPHVCALPAHMLLLASVVVCLGMHASAMLFCKRDM
ILVFEEETLQPLCDESSLMVPIILDGVLLTVASLKASSLCWAWVLS* back to topmRNA from alignment at H-canaliculatus_F_contig1145:15193..21388+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1145.1281.1 ID=mRNA_H-canaliculatus_F_contig1145.1281.1|Name=mRNA_H-canaliculatus_F_contig1145.1281.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6196bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1145:15193..21388+ (Hapterophycus canaliculatus Oshoro5f female)
GCATGGCAGTCTCGTCGCGGTTGTTGTGATGCTCCGCATGTCCGAGCATG
TGAGAGTCTAGACGGAAATTCGTAGGAATAATAACATCGGACATGAACAT
GTTTTGTGGATATGTAGATGTGTAGTCAATCAGGGTAAAGAATGAAACAC
TGGACTGCCGGAGACAAAGAGCAGTCAATTGCTTCCCTTTTCACAGATAT
TTTGATCGATCACTGAAGGCCCTGCACGTTAAACGAGGCACGCTCGCAAG
CTCAATCTCCCCTTGGCCGCTGAACCGCCTGCAACCTACTTCGCTCCGCT
ACATTCCAGTGGACGGGTTGATCCCAAATTGTTATGGTCGGGCTGGGGGC
TGGGGCAAAAAAGTCTCAGTGCTCTGTCTGTGTCAGCCCGGGGCTTCTTC
AGGGAATATTCCTTCACATGTTCAACGTCGATGCATCGAAGGTGTTCGCT
CTCTGTCCTGGTGTACGAAGGAGGCGCGTGTCCCAGGCATCGTTTTGGCC
TTTCCCTGCCCAGGTTGTCAGGCATCAACCTTTGCGCCAGCTGTCAAAAT
GTGACAGCTTATCACGCTAGCAGCGAGCGGCCAACCGTCGAGGTGCTGAT
GAAATATGAAATGTTTTTTGTTTTTTGTTTTTGCGCTCGCTGTTTGCGTG
TTCTTGTAGGAACGCAGAACCTTTCTTCTTTCGACCGTTGGCCTCTTCGT
CGCGTCTCCGAGATAACAACGGGGAAATACGAGCCTGTAGTTGGGCACGC
TGAAGCGACTCTGCAACCCGGTTGAGATTGGATTGCCCCGAGGCTCCTCT
CTCTAGAGAAACAGTACACTTGCACTCGTTCCCCTTGAGTGAGGTGTGAT
CACAGAAGGCAAGTTGCGGTGTCTCCAAAATAATAATTCGAATTGGGTCA
CCTGTCTCCAGAGCAAATCTCTCTCCAGCTACCTCTCTCTCGGGAGATAT
TTCCGGGGTCCTCCGGCTGACGGCAAAATTTTAATTGTTTTCCTGTCCCC
CGATTCATTTCCTACCCCCACAATTTAGGACCCCACCCATCTCCTTCCGG
TGCAGCTCGGAGTGTGAGCGAGTCCGCGCAGCCTCATCCGCCTCTTCGAC
TTCGCGCGTAAGGGTGAAGGACGGCTGGGACTTACCGCGTGGAAGCAATG
TCCTCACCACGCGCATCTCCGGAACCTGCTCCTATTCCCGGCGGGATGAG
CGTCAAGGATCGAGCGCGGACATGGCAAACCAACGCTTCGCCTTCGCCTT
CGCCTTCGCCTTCGCCTTCACCTTCACCTTCGCCTTCGCCTTCGCCTTCG
CCCACGTCTTCGCTGCCCCGTCCTACGCCGGTGGAGACGGAGACGACGCC
ACCACCCACCATCGAAGAAATCGAGGCCATGGAGAAGGCGGAGGCGGAGC
CATCAAGAGCTGGTGAAAAGACGGGGGCAAAAGGAACGGACGAGATATGT
CACACCGCGAGCTCCCCCCCGAACGATTCGAACTTATCCGTGAACAGGCA
GGCGGGCAAGTCCTATAGCCGGCAGGTGAGCCGGGTCTCGGGCACGGGAA
GGACGGCGGCGCGCGCCGTCACGCCTAGAGCCGTAGCCGCTGTCGCTCCC
ACCACTGTCGATGCCACTGCTGCTGCAGGCGAGGCTCTGCCTGCCCCGCA
GACCAGAGGGCGCTCTCCTCGAAACGCGGAGCAAGGACGGTCCAGTGCTC
CCCGTAAAATCCGTCGCTCGATCTCGGTGGACGACGCGGACCACCGTCCC
AGGCAGGCACGCTCTTCGCGTAGGCAGCGCCCGATCGCGACAGGCAACGG
TGGAGTTCCTTCCTCCAGGGCGGTCAATGGTGGCAGGGCCGGTGTTGCCC
GACCCGCTAACAACATGGCCGGGAGGCCACAGCAGCACCAGCACCAACAG
CAGCAGCGGCGACGAGTTCAACAGCAGAACAAACCGAGACCCCAGGCAGC
CACAGGACGAGGGCGTACCCCGTACACGGCTCAAGGGACCCCGTCTGCAG
CAACCGCGAACAACAGGCAGCAGCAACAGCAGCAGCAGCAGCAGCACCTC
CGAATCCACGACGGGCCCGCCTCAACGCGCGCTCTTGGAGGATCGCGCAA
CTTCGATATTACATCGTCACCGCCGGGGGCAAGCAAGGCGACTCCGAAGA
TGCGGCGACACAACTCCGCGCCGGACATGGGCGTCATGGACGACCAGGAG
GACGACCTCGCATCACCGCGGCGCCAAGCAATGGAAGGGTCGCCTCCGCA
GGCCTGCTGGGGGGGTGGTCTGCCTCCGACCTGCGGGCCGGCGGCGGCCC
GGGCGGCGGTGGCGGCGGCGGAAGCAAGGGCAGTCGGAGAGTCCACCGCG
GGGAGCAGCCGTTACCCTGCCAACGACCGGGAGAGCTTCGCGCGAACGCT
GAACGAGGACGAGCTGGACGAGGTATGGAAGGGGCTCGGGGAAGGGGTGA
GCCAGCGGGGTGCCGGGTCGGAGGTGGCTTTCGAGGCGGTGGACAACGCC
CCAGCGAGCCCGAGCGGGACCGGAGTCAGCGGCGCGTTCCCCACTCTCAC
CGCGAACGTGCTAGAGAGGCACGACCAGCTCGCAGATGGCAGCGGCAGCG
GCGGCGGCTCGTCGGGAACGCGTCAAGGGGCGAACGTGATGCCCATGCCG
AAGAAGCTGGGCGAGCGGACGGTGGAGGACATGGAGAACGGGACCAGGCG
CTCCTCCAAGAGGAGCAAGGGCAGCGGCGGCCGCTCGGAGCCCCAGCACG
AGACCACGCTGCTCGGCGCGATCGTGTCTTACGGGATCTTGGTCCTGTGG
GTTGCGCATCTCGTGTTCAACGTACTGCTTTTGTAAGTCAGTCGTCTTCG
CATCCAGGGTGTGAAAAATGTTCTTCATTCGTTTTTCGCTCTTTGTAACA
TGCTCAAGGCCCGGCCTGTCCCCGACAAGTCGTCCTAATTCTTACATCGT
ACTTCGACAGCCTGTTTCGTTCGCCTTGTCTTCTCGTACCTTCGGTGAAC
TTTTCTTTTCTGGAGGATTTATCACCGCCCCGAGGATTTTTCCCCAGGCG
TTGCTCGTGTTTTTTGAGAATTTCCGTGTTGGAACACAAGGAAGAGCTAC
TCAAGTATACCAAGATCTTCAATGGACAAGGCAACAAGGAGATGACTAGC
TTTGGCCTTGCCGACCACAGCTCCATGGCTAATCCGCTCCATATTCATAT
TAAGGCGAATCGCGGCTTCTTCAAGAGCAATCAACTGCACTCGTATGTGC
GACATGTATATGGTATTTTGTATCTTCGAGTTCGCGCAAGTTGTGGAAGG
GGCGACAGGTGGTTTCAATCATCCAACAGCCTACTCTCGTGTAGGTGGAA
ATCTGTTTATGAGGAGAACAACTCTGCTTGCACCAAAATTTAAAGTCAAA
TCTCTTGCTTTTGCTGAACCGGGAAGATGAAGGTCACATGAAGCCCCATT
TTGATATGCCAACCGACCGCGGAGATTGTCAAATCTGACTGTCTCCCGTC
TCCCGTGGGTTGCCAACCCCTCACCCGTCACGCCCTCGTGTTGCTGCCGC
CGTTTTTTCACCTACTCCTTCTTCCAGGTGGAATATTGTCGACGATGACT
ACATCTGGGGGCTGTGTTTCCTTCCAGGTGTGCTCGGCATTCTCCTGTCA
TTCAACAGCTGCCGTAAAAGCCACCGCCACTGTAAACCGGCCGTGGACGA
GGCAGGGGGACGGCAGCCACGGCCGTCGCGGCGGACCGCGCCTCACGTGT
GCGCCCTCCCGGCCCACATGTTGTTGCTCGCTTCTGTCGTCGTATGCCTC
GGGATGCATGCGTCTGCCATGCTCTTCTGCAAGGTCAGTCCAGCCACTAT
ATTTCCGTTTGTGTATCCCTGCTGTGTGTGTATGTGTGTGTGTGTGTGTG
TGTTTCATGAGATGCTCGCCGGCCTGACCGATCTTGAGAGACAGCCTGTC
TCGACGCAAGTGCACGTCGTCGTCCGTGGCCCGTCTCCGCGGTTCTTGCG
AAATTTCAAGAAGGGTCACGAGCAGCTCGGCTCAATGCGTCGGACGGGTG
CGGGGGGGGGATGGAGGTCCCATCTCTTGCTCTCTTCGATACCTTTTTCT
TCTGGCTGGGGGAGCTGCGGCTGGGTTCGGCCCGGGTTGTTTCGCGGCCG
CAGGGTACCTGCTTACCGAGAACAAACGGAGAAGCTGTTACTCTTTGATG
TTCCGTTCCACGCACCCTCAGATCAACGCTTGGGAAGTATGCCTCGTTAT
CGATGTTGCATCGATCCGCCCAGCAACAGAGAATACCATCCTGCGGTGGT
AAATCGGCCTTCCGTGATATCAGTCACTTGTTGCAACTTTTTCTTGTCAA
CTTACGTTTCATATTTCAGCAATCGTCCTGCAGCAACCACATGTTTCGTT
CCTGCTGCCCCCTTGTCGTGACATGCAGTCCCTGCCCCACCATGTCGTCC
GCTGTCTTTCGTCCGTACTTTACCCCCAACAGAGGGACATGATTCTGGTG
TTCGAGGAGGAGACGCTCCAGCCTCTGTGCGACGAGAGCTCGCTGATGGT
CCCCATAATCTTGGACGGCGTGCTTCTAACGGTGGCCAGCCTTAAAGCGT
CGAGCTTGTGCTGGGCGTGGGTCTTGAGTTGAAGCCCATGATGGAGTCGC
TGCATGTCCCTCTATCCTTCTCAACCGTGGCTTTGTTTCCCTCTGCGACC
TCTTAGTTTCTTCTAGAAATGTGCGTGAGCCTATCGTTTCGAACCATTGC
AAGCTTTTGAACGAAGAGCGTCACATGACTCGATCGATGTCACTGATGGC
GTGGATTGGGATGTAGTGAAAAAGAAACGTCGTAGGGAGGTAAGCAACTT
TTTGCTGCTGTTTCGGTTACGGCTTCCGTCGGCCCCTCTTGCCTGTTGGA
CGTGTGTGCGCGCGCGTCTTATGTGTGTGTTGTGCGTGATGGTCTGTCGT
CGGCGCTTCCGTGACGATGGGGGCGGGCGCGATCTGAAGCAGTGCTGTTG
GTCGCGCCCAGGGGGGTATGTCGAAACCACTGATCTGCTTGTGTGGCACG
TACTTTGCGTACGGATGTAGGATGTATATGTTTCGTCAACATCCATCAGA
GGCCTGGTGGGCGTTTTCTGCCTTCTGTAGGGTACGGTGCTGTGTGTATG
GTTTCTGTCCTGTAGTTTGTACCATCGTGGGGCTCACCTTGAAAGGTTTT
TAACCTACACCGTGGATGCCCTGCACGCGGAGCAGGAAATGAACACTTTC
AGGTTTGCCTTTCTTTGCGCGCGGAGATGCACCGCACCTTAAAGGCGGTA
GCAGCCTTTTATCTATGTCGTTATTATTCTTATCATTGGTTTGATGGGTT
TTCACCATTTTAGACGGGTTTAATTTTTTTTCCTGGTCACGTCCAGGAAA
GGTATGGCCGGAACCAGGGCGTGTCATCGGTGAGGCGTGTCATGAGAGCT
GACCCCTGTTTCTTTTTTTGAAAAGGATGGAGTGAGTGTGGGGGAGGTGC
GTACGAGAGCAATCATACCTTCATGATTTACAGCAGTTGTACATCGGTGT
AGAGGGGGTGGCATGACAATCTGCCATGCTTTCGGGCGTAGGATTCACCC
ATCTCGCAACCTAGGCGCGTCGAATGTTGCGTTGTACGGCAATGGTCGCC
TTGACGGGATTAGTCGCCTGTGTGCCGTAGGATGTTGCGTCAGTTCGAAC
GTGTTATCCTCGCACGGTTGCCATTTGAAGTGGGCTATAGCGAGAGAAGC
AAAAAAAAAGAAAGGGTTCGGCGCACGCGGGGCGGAGAAGGGCGGAGGCT
TGTAAAGGGAGATGCGGAGCTGATCACATACATGCTTGTAACGGGACAGG
GGTATACAGACAAGTGCGTAAAACGTGCCGCTTTTTGGGTGCAACATTTC
TTGTCGGTGGGGCTGGGCTGATTGATCTAGTCCTCGTTCCTTTTGCCACA
CTAGTGTTTACAAGGAGGGTAAGCTATGGGCGACAGGAGATGGGTACGGG
ATACATGGAAGACCAGAGAGATAGTTTTGGTCAAATAGGTGTAGAGGTGT
GAATAAAACGACGGAAATATCAACTCCATTCCATCACTCGCTTCTGCTGT
CGGTACCTGGGCCGAAAACTTTCGCCACCCACGTCTTACGAACTCTGTTG
AGGGGTGAATTATTCGTCACGTGGATGTTTTTTCAGTGGATCATTT back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1145:15193..21388+ >mRNA_H-canaliculatus_F_contig1145.1281.1 ID=mRNA_H-canaliculatus_F_contig1145.1281.1|Name=mRNA_H-canaliculatus_F_contig1145.1281.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4182bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1145:15193..21388+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCCTCACCACGCGCATCTCCGGAACCTGCTCCTATTCCCGGCGGGAT
GAGCGTCAAGGATCGAGCGCGGACATGGCAAACCAACGCTTCGCCTTCGC
CTTCGCCTTCGCCTTCGCCTTCACCTTCACCTTCGCCTTCGCCTTCGCCT
TCGCCCACGTCTTCGCTGCCCCGTCCTACGCCGGTGGAGACGGAGACGAC
GCCACCACCCACCATCGAAGAAATCGAGGCCATGGAGAAGGCGGAGGCGG
AGCCATCAAGAGCTGGTGAAAAGACGGGGGCAAAAGGAACGGACGAGATA
TGTCACACCGCGAGCTCCCCCCCGAACGATTCGAACTTATCCGTGAACAG
GCAGGCGGGCAAGTCCTATAGCCGGCAGGTGAGCCGGGTCTCGGGCACGG
GAAGGACGGCGGCGCGCGCCGTCACGCCTAGAGCCGTAGCCGCTGTCGCT
CCCACCACTGTCGATGCCACTGCTGCTGCAGGCGAGGCTCTGCCTGCCCC
GCAGACCAGAGGGCGCTCTCCTCGAAACGCGGAGCAAGGACGGTCCAGTG
CTCCCCGTAAAATCCGTCGCTCGATCTCGGTGGACGACGCGGACCACCGT
CCCAGGCAGGCACGCTCTTCGCGTAGGCAGCGCCCGATCGCGACAGGCAA
CGGTGGAGTTCCTTCCTCCAGGGCGGTCAATGGTGGCAGGGCCGGTGTTG
CCCGACCCGCTAACAACATGGCCGGGAGGCCACAGCAGCACCAGCACCAA
CAGCAGCAGCGGCGACGAGTTCAACAGCAGAACAAACCGAGACCCCAGGC
AGCCACAGGACGAGGGCGTACCCCGTACACGGCTCAAGGGACCCCGTCTG
CAGCAACCGCGAACAACAGGCAGCAGCAACAGCAGCAGCAGCAGCAGCAC
CTCCGAATCCACGACGGGCCCGCCTCAACGCGCGCTCTTGGAGGATCGCG
CAACTTCGATATTACATCGTCACCGCCGGGGGCAAGCAAGGCGACTCCGA
AGATGCGGCGACACAACTCCGCGCCGGACATGGGCGTCATGGACGACCAG
GAGGACGACCTCGCATCACCGCGGCGCCAAGCAATGGAAGGGTCGCCTCC
GCAGGCCTGCTGGGGGGGTGGTCTGCCTCCGACCTGCGGGCCGGCGGCGG
CCCGGGCGGCGGTGGCGGCGGCGGAAGCAAGGGCAGTCGGAGAGTCCACC
GCGGGGAGCAGCCGTTACCCTGCCAACGACCGGGAGAGCTTCGCGCGAAC
GCTGAACGAGGACGAGCTGGACGAGGTATGGAAGGGGCTCGGGGAAGGGG
TGAGCCAGCGGGGTGCCGGGTCGGAGGTGGCTTTCGAGGCGGTGGACAAC
GCCCCAGCGAGCCCGAGCGGGACCGGAGTCAGCGGCGCGTTCCCCACTCT
CACCGCGAACGTGCTAGAGAGGCACGACCAGCTCGCAGATGGCAGCGGCA
GCGGCGGCGGCTCGTCGGGAACGCGTCAAGGGGCGAACGTGATGCCCATG
CCGAAGAAGCTGGGCGAGCGGACGGTGGAGGACATGGAGAACGGGACCAG
GCGCTCCTCCAAGAGGAGCAAGGGCAGCGGCGGCCGCTCGGAGCCCCAGC
ACGAGACCACGCTGCTCGGCGCGATCGTGTCTTACGGGATCTTGGTCCTG
TGGGTTGCGCATCTCGTGTTCAACGTACTGCTTTTATGTCCTCACCACGC
GCATCTCCGGAACCTGCTCCTATTCCCGGCGGGATGAGCGTCAAGGATCG
AGCGCGGACATGGCAAACCAACGCTTCGCCTTCGCCTTCGCCTTCGCCTT
CGCCTTCACCTTCACCTTCGCCTTCGCCTTCGCCTTCGCCCACGTCTTCG
CTGCCCCGTCCTACGCCGGTGGAGACGGAGACGACGCCACCACCCACCAT
CGAAGAAATCGAGGCCATGGAGAAGGCGGAGGCGGAGCCATCAAGAGCTG
GTGAAAAGACGGGGGCAAAAGGAACGGACGAGATATGTCACACCGCGAGC
TCCCCCCCGAACGATTCGAACTTATCCGTGAACAGGCAGGCGGGCAAGTC
CTATAGCCGGCAGGTGAGCCGGGTCTCGGGCACGGGAAGGACGGCGGCGC
GCGCCGTCACGCCTAGAGCCGTAGCCGCTGTCGCTCCCACCACTGTCGAT
GCCACTGCTGCTGCAGGCGAGGCTCTGCCTGCCCCGCAGACCAGAGGGCG
CTCTCCTCGAAACGCGGAGCAAGGACGGTCCAGTGCTCCCCGTAAAATCC
GTCGCTCGATCTCGGTGGACGACGCGGACCACCGTCCCAGGCAGGCACGC
TCTTCGCGTAGGCAGCGCCCGATCGCGACAGGCAACGGTGGAGTTCCTTC
CTCCAGGGCGGTCAATGGTGGCAGGGCCGGTGTTGCCCGACCCGCTAACA
ACATGGCCGGGAGGCCACAGCAGCACCAGCACCAACAGCAGCAGCGGCGA
CGAGTTCAACAGCAGAACAAACCGAGACCCCAGGCAGCCACAGGACGAGG
GCGTACCCCGTACACGGCTCAAGGGACCCCGTCTGCAGCAACCGCGAACA
ACAGGCAGCAGCAACAGCAGCAGCAGCAGCAGCACCTCCGAATCCACGAC
GGGCCCGCCTCAACGCGCGCTCTTGGAGGATCGCGCAACTTCGATATTAC
ATCGTCACCGCCGGGGGCAAGCAAGGCGACTCCGAAGATGCGGCGACACA
ACTCCGCGCCGGACATGGGCGTCATGGACGACCAGGAGGACGACCTCGCA
TCACCGCGGCGCCAAGCAATGGAAGGGTCGCCTCCGCAGGCCTGCTGGGG
GGGTGGTCTGCCTCCGACCTGCGGGCCGGCGGCGGCCCGGGCGGCGGTGG
CGGCGGCGGAAGCAAGGGCAGTCGGAGAGTCCACCGCGGGGAGCAGCCGT
TACCCTGCCAACGACCGGGAGAGCTTCGCGCGAACGCTGAACGAGGACGA
GCTGGACGAGGTATGGAAGGGGCTCGGGGAAGGGGTGAGCCAGCGGGGTG
CCGGGTCGGAGGTGGCTTTCGAGGCGGTGGACAACGCCCCAGCGAGCCCG
AGCGGGACCGGAGTCAGCGGCGCGTTCCCCACTCTCACCGCGAACGTGCT
AGAGAGGCACGACCAGCTCGCAGATGGCAGCGGCAGCGGCGGCGGCTCGT
CGGGAACGCGTCAAGGGGCGAACGTGATGCCCATGCCGAAGAAGCTGGGC
GAGCGGACGGTGGAGGACATGGAGAACGGGACCAGGCGCTCCTCCAAGAG
GAGCAAGGGCAGCGGCGGCCGCTCGGAGCCCCAGCACGAGACCACGCTGC
TCGGCGCGATCGTGTCTTACGGGATCTTGGTCCTGTGGGTTGCGCATCTC
GTGTTCAACGTACTGCTTTTGTGGAATATTGTCGACGATGACTACATCTG
GGGGCTGTGTTTCCTTCCAGGTGTGCTCGGCATTCTCCTGTCATTCAACA
GCTGCCGTAAAAGCCACCGCCACTGTAAACCGGCCGTGGACGAGGCAGGG
GGACGGCAGCCACGGCCGTCGCGGCGGACCGCGCCTCACGTGTGCGCCCT
CCCGGCCCACATGTTGTTGCTCGCTTCTGTCGTCGTATGCCTCGGGATGC
ATGCGTCTGCCATGCTCTTCTGCAAGGTGGAATATTGTCGACGATGACTA
CATCTGGGGGCTGTGTTTCCTTCCAGGTGTGCTCGGCATTCTCCTGTCAT
TCAACAGCTGCCGTAAAAGCCACCGCCACTGTAAACCGGCCGTGGACGAG
GCAGGGGGACGGCAGCCACGGCCGTCGCGGCGGACCGCGCCTCACGTGTG
CGCCCTCCCGGCCCACATGTTGTTGCTCGCTTCTGTCGTCGTATGCCTCG
GGATGCATGCGTCTGCCATGCTCTTCTGCAAGAGGGACATGATTCTGGTG
TTCGAGGAGGAGACGCTCCAGCCTCTGTGCGACGAGAGCTCGCTGATGGT
CCCCATAATCTTGGACGGCGTGCTTCTAACGGTGGCCAGCCTTAAAGCGT
CGAGCTTGTGCTGGGCGTGGGTCTTGAGTTGAAGGGACATGATTCTGGTG
TTCGAGGAGGAGACGCTCCAGCCTCTGTGCGACGAGAGCTCGCTGATGGT
CCCCATAATCTTGGACGGCGTGCTTCTAACGGTGGCCAGCCTTAAAGCGT
CGAGCTTGTGCTGGGCGTGGGTCTTGAGTTGA back to top
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