mRNA_H-canaliculatus_F_contig1145.1279.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: D8LJV8_ECTSI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV8_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.010e-44 Identity = 73/83 (87.95%), Postives = 82/83 (98.80%), Query Frame = 1 Query: 19 MASLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNERGNYG 267 MASLRREVLGGY+RLMRVR+ AF+DD+TM+EASKQQLR+EFNKNKAVTDPSKIAGL+KGINEVE+MLKYNIAQARLN+RGNYG Sbjct: 1 MASLRREVLGGYRRLMRVRVVAFEDDTTMLEASKQQLRIEFNKNKAVTDPSKIAGLIKGINEVEEMLKYNIAQARLNDRGNYG 83
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A6H5K8N1_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N1_9PHAE) HSP 1 Score: 129 bits (325), Expect = 2.870e-36 Identity = 72/112 (64.29%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 19 MASLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIA------------------------------GLVKGINEVEDMLKYNIAQARLNERGNY 264 MASLRREVLGGY+RLMRVR+ AFKDD+TM+EASKQQLR+EFNKNKAVTDPSKI GL+KGINEVEDMLKYNIAQARLN+RG+Y Sbjct: 1 MASLRREVLGGYRRLMRVRVVAFKDDTTMLEASKQQLRIEFNKNKAVTDPSKIGQQHSRARGSLDRLYRMESACQIADRFLHVPGLIKGINEVEDMLKYNIAQARLNDRGHY 112
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A4D9D3L3_9STRA (Complex1_LYR_dom domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3L3_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.030e-18 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 1 AAGRSTMASLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNERGNY 264 AA L+ VLGGY+RL+R+RL F+ D ++ ++ QLR EFNK++ V D ++ GLV GI EVE+M NI Q RLNE GNY Sbjct: 7 AAAAKASTGLKNSVLGGYRRLLRLRLRVFQGDQYAMDQARLQLRTEFNKHRHVQDHRELEGLVAGIREVEEMFSENIVQGRLNEAGNY 94
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A835YM21_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM21_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.000e-17 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 25 SLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARL 246 ++R V+ GY+ L+R RL FKDD I ASK +L+ EF KNK VTD +K+A L+KGI EV+ ML +N+ Q R+ Sbjct: 2 AMRSRVMAGYRSLLRTRLVVFKDDDRAIRASKMKLKEEFMKNKNVTDANKLASLLKGIEEVQQMLLHNVVQVRI 75
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A7S1U0R5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0R5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.810e-15 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 19 MASLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNERGNY 264 MA+ R + L G++RL+R R F+ D+ + AS+ +LR +F N+ TD +KIA +++GI+EVEDM+ N Q LNE+GNY Sbjct: 1 MAATRLQALHGFRRLLRARKVLFRGDANALAASQLELRSQFQTNRHETDAAKIAEMLRGIDEVEDMMLNNFVQGELNEQGNY 82
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A6G0WSM7_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSM7_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 6.550e-13 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 25 SLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNERGNY 264 S+R +VLGGY+RL+R F D + + + +R F +N+ V D S + GL+KGI+E E ML YNI Q + NE+G Y Sbjct: 5 SVRAQVLGGYRRLIRASRQTFGADKRAVVEAHKAVRAAFLENRDVKDVSALQGLIKGIDEAESMLLYNIVQGQANEQGTY 84
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A1V9YYX3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYX3_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 4.880e-12 Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 25 SLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNERGNY 264 SLR + L GY+ L+R AF+ D I+ +++ +R F +N+ TD IA +VKGI E E ML++NI Q + NE G+Y Sbjct: 2 SLRSQALWGYRSLIRASEQAFRGDVYAIKEARKAIRAAFVENRRETDTETIAAMVKGIEEAESMLRFNIVQGKKNEAGSY 81
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A3M6VHL4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHL4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.180e-11 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 25 SLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNE 252 S+RR+VLGGY+RL+R AF+DD+ ++ + LR F N VTD ++ LVKGI+E E ML ++I Q R E Sbjct: 2 SIRRQVLGGYRRLLRASRQAFRDDAYALQQAHLTLRQNFIDNCQVTDKKQLDELVKGIDEAEGMLLHHIVQGRAKE 77
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A8K1CDB7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDB7_PYTOL) HSP 1 Score: 65.1 bits (157), Expect = 2.180e-11 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 25 SLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNERGNYGGCPMW 282 SLR +VLGGY+RL+R F+ D+ I+ ++ LR F N+ V D + L+KGI E EDML+++I Q R + G P + Sbjct: 2 SLRSQVLGGYRRLLRASRETFRGDTYAIDQARLALRENFLVNREVQDEDTVHELIKGITEAEDMLRHHIVQGRQKATDDATGAPRY 87
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Match: A0A067C3I0_SAPPC (Complex1_LYR_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C3I0_SAPPC) HSP 1 Score: 64.7 bits (156), Expect = 2.750e-11 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 25 SLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPSKIAGLVKGINEVEDMLKYNIAQARLNERGNY 264 SLR + L GY+RL+R AF D I +++ +R F +N+A TD I +VKGI+E E ML +NI Q + NE G++ Sbjct: 2 SLRSQALWGYRRLVRASEKAFVGDVYAITEARKAIRANFAENRAETDAETIQAMVKGIDEAESMLLFNIVQGKKNESGSF 81 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1145.1279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1145.1279.1 >prot_H-canaliculatus_F_contig1145.1279.1 ID=prot_H-canaliculatus_F_contig1145.1279.1|Name=mRNA_H-canaliculatus_F_contig1145.1279.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=91bp MASLRREVLGGYKRLMRVRLAAFKDDSTMIEASKQQLRVEFNKNKAVTDPback to top mRNA from alignment at H-canaliculatus_F_contig1145:1514..2391- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1145.1279.1 ID=mRNA_H-canaliculatus_F_contig1145.1279.1|Name=mRNA_H-canaliculatus_F_contig1145.1279.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=878bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1145:1514..2391- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1145:1514..2391- >mRNA_H-canaliculatus_F_contig1145.1279.1 ID=mRNA_H-canaliculatus_F_contig1145.1279.1|Name=mRNA_H-canaliculatus_F_contig1145.1279.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=546bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1145:1514..2391- (Hapterophycus canaliculatus Oshoro5f female)back to top |