mRNA_H-canaliculatus_F_contig1144.1272.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1144.1272.1
Unique NamemRNA_H-canaliculatus_F_contig1144.1272.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 3.170e-94
Identity = 185/419 (44.15%), Postives = 254/419 (60.62%), Query Frame = 1
Query:   10 KIGSVEVGAASFVMDLGEELPV-------FKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIV-AVQEDLGTVDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTAD-----------------------------------ELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNNVYTDILHGM-------------GDPPSQSDNAISYIKKRMDKLEG-EGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            K+GS  V + +F+ +LGE+LP         +P+LK L + RE + +V+ N+EEL  L  RC ++TA ++V + Q     +D+T +E+ + A   +V  CG  GK +R   AS +KE +A +   +  + +    A V+ ++ +T+D                                   +LAK+P  TP  +SWHVER +V+  VFEAL   G P LVGLVG SGSGKTTAASE+V++ EVR+AFS G+VW++VN+   D L  +             G  P+ SD+  +YIK++M +  G +G KCLVVADNV EKEV+ KLLETGM +LL+TRDE+LV  + G VV VD+MS  EAE VLR+A+ELPP   LP  A+DLIELC  VAMD+AFVGRW+TVRGR D  AWSDA  +V
Sbjct:   18 KMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGGRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKV 436          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 3.440e-94
Identity = 192/425 (45.18%), Postives = 246/425 (57.88%), Query Frame = 1
Query:    1 VAYKIGSVEVGAASFVMDLGEELPVFKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIVAVQEDLGTVDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGV-------------------------VSYFDAARVSTVKEQTADEL------------------AKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNN----------------VYTDILHGMGDPPSQSDNAISYIKKRMDKLEG-EGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            +A K+GS       FV DLGEELP+ +P+L+ LR  REK+  VK N E+L  L  RCT++TA  IV  +     +DV  LED V AVE+ V    + GK SR   A  +K  + +L +R+  +                         V++    R+   +E   +EL                  A VP GTP  +SWHVER +V   VF+AL   G P LVGLVG SG+GKTTAAS +V +  VRE FS GIVW+ VN                 V+ DI   +G  PS SD+ ++Y+K++++   G +G KCLVVADNV E +V+++LLETGM ILL+TRDE+LV  A G VV VD++S  EAE VLRRAAEL P A LP  A DLIELC  VAMD+AFVGRW+TVRGRQD  AWSDA  +V
Sbjct:   15 IASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKV 439          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 1.990e-91
Identity = 178/402 (44.28%), Postives = 244/402 (60.70%), Query Frame = 1
Query:    1 VAYKIGSVEVGAASFVMDLGEELPVFKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIVAVQEDLGTVDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTAD--------------------ELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNN----------------VYTDILHGMGDPPSQSDNAISYIKKRMDK-LEGEGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            +A +IGS    A S  +DLGEELPV KP+ K L++ R  +  VK NREELA L  RCT++TA  +V  +     VDV  L+D V A +     C R GK SR   A  +K  +A LN  V+ + +    A ++ ++ +  D                    +LA VP G P  +SWHVER H ++ V +AL       +V L G SGSGKTT A+E+V++TEVREAFS GIVW+ VN                 V+ +I   +G  PS S+++ +YIK+R+++  +G   KCLVVADNV E++V++KL+ETGM +LL+TRDE +V  + G  V+VD++S  +AE VL+RAAELP  + LP  A+DLI+LC  VAMDVAFVGRW+TVRGR D A+WSDA   +
Sbjct:   15 LALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTI 416          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 5.510e-84
Identity = 174/413 (42.13%), Postives = 232/413 (56.17%), Query Frame = 1
Query:   16 GSVEVGAASFVMDLGEELPVFKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIVAVQEDLGTVDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTAD-----------------------------------ELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNN----------------VYTDILHGMGDPPSQSDNAISYIKKRMDKLEG-EGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVI-VDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            G++     +F+ +  + LP+ +P+LK L++               A L  RCT++T  +IV  ++    +  T L + V AV   V  C R G  SR   A+ +KE +A L  R+  +      A ++TV  +  D                                    LA VP GTP  +SWHVER HV+ AV +AL   G P LVGLVG SGSGKTTAA+E+V++TEVREAFS GIVW+SVN+                V+ DI   +G  P+  D+  +Y ++RM    G +G KCLVVADNV E+ VI+KLLETGM +LL+TRDE LV  A G VV+ VD++S ++A  VLRRA+EL P   LP  A++L+ELC  VAMDVAFVGRW+TVRGR D  AWSDA  +V
Sbjct:    6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKV 418          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 3.370e-73
Identity = 139/245 (56.73%), Postives = 171/245 (69.80%), Query Frame = 1
Query:  412 QTADELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNN----------------VYTDILHGMGDPPSQSDNAISYIKKRMDK-LEGEGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            +T  +L KVP GTP  +SW+V+R HV+  VFE L   G P LVGLVG SGSGKTT ASE V++TEV+EAFS GI W+SVN+                VY DI   +G  P+ SD+  +YI++RM K   G+  KCLVVADNV EKEV++KLLETGM +LL+TR+  LV +A G VV VD++S  +A  VLRRAAELPP   +P  A+DLIELC  VAMD+AFVGRW+TVRGRQD  AWSDA  +V
Sbjct:   28 KTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKV 272          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 4.550e-71
Identity = 158/349 (45.27%), Postives = 203/349 (58.17%), Query Frame = 1
Query:  109 REKLTDVKVNREELAELIDRCTHVTAVLIVAVQEDL--GTVDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTADELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNN----------------VYTDILHGMGDPPSQSD-NAISYIKKRMDKLEG-EGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            RE +  V   R+ELA L  RCT++TA +I   +        +V+ LED V   E+ V    R  KR+          A  EL      ++       +         + A VP GTP  +SWHVER HV   V EAL     P LVGLVG SG+GKTTAA+E+V++  VRE+FS GIVW++VN                 V  DI   +G  P++S  NA +YIK+RM+   G +G KCL VADNV EKEV++ LL+TGM +LL+TR E+LV  A G  V +D++S  +AE VLR AAELPP   LP  A+DLI+LC  VAMD+AFVGRW+TVRGR D  AWSDA  +V
Sbjct:    2 RETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVE---RRKKRTMEQMVQNQAAARKELLANQEIIIDRLPKPPI---------KKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKV 337          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 4.000e-70
Identity = 163/402 (40.55%), Postives = 220/402 (54.73%), Query Frame = 1
Query:    1 VAYKIGSVEVGAASFVMDLGEELPVFKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIV-AVQEDLGTVDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTAD-----------------------------------ELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNNVYTDILHGMGDPPSQSDNAISYIKKRMDKLEG-EGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            +A K+GS  V + +FV DL E+LP                     N+EEL  L  RC  +T  +IV + Q     +DV+ +E+ + A   +V  CG  GK +R   AS +K+ +A +   +  + +    A V+ ++ +T+D                                   + AK+P  TP  +SWHVER  V+  VFE L   G P LVGLVG SGSGKTTAASE+V++ E R      ++    + VY +I    G  P+ SD+  +YIK+RM +  G EG KCL V DNV EKEV+ +LLE GM +LL+TRDE+LV    G VV V+++S  EAE VLR+AAELPP   LP  A+DLIELC  VAMD+AF GR +TVRGR D  AWS A  +V
Sbjct:   15 LALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNEDRLP---SLMLQLAHMVYEEIG---GRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKV 391          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 7.620e-62
Identity = 151/427 (35.36%), Postives = 215/427 (50.35%), Query Frame = 1
Query:    1 VAYKIGSVEVGAASFVMDLGEELPVFKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIVAVQEDLGT-VDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTAD------------------ELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVV--------QN----------TEVREAFSGGIVWMSVNN------------------VYTDILHGMGDPP--SQSDNAISYIKKRMDKLEGEGS-----KCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            V  K+GS       F  +LG E+PV   +LK L++ R +   V+ N E L  L +RCT+VTA +IV  ++   + ++V  LE  V A E  +  C R G   R   AS + + +  LN RV+ +      A ++++  +  D                   +A VP G P   SWHV R  V+ AV+E L C  TP +VGLVG+SGSGKTT A+ +V        QN            VRE F  G+VW+ V                    V+ D+ H  G  P  S +    ++I    D + G+GS     +CLVVAD+V E +++ +L  TGM +L T+RD  LV    G+VV VD++S  EAE +LR AAEL   + LPS A  +IE CD +A  + FVGRW+TV+G  D   W++A   +
Sbjct:   58 VFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFIS---DFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAI 481          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 3.110e-44
Identity = 122/407 (29.98%), Postives = 199/407 (48.89%), Query Frame = 1
Query:   46 VMDLGEELPVFKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIVAVQEDLGT-VDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTV-------------KEQTADELAKVPTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVV------------QNTE--------VREAFSGGIVWMSVNN------------------VYTDILHGMGDPPSQSDNAISYIKKRMDKLEGEGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVR-----GRQDNAAWSDATMQV 1095
            ++ +GE++P    +   + +A++ +     N+ +L +L +RC  +T  ++  ++      V+V+ LED V  +E +    G+    +R     ++ E + +L  R++  +    AA V  V             + Q   +LA VP G P  +SWH  R  V+  V++ L   G P++  L G+SG+GKTTAA+ +V            +N E        +R  FS G+VW+ V                    ++ ++L    D P   ++  SY+KK    +E E  KC VVAD+V E  V+ KL ETGM ILLT R+  +V       V VD++   EA+ VLR AA LPP   L   A+ ++E+C +VAMD+AFVG W++VR       + + AW+    ++
Sbjct:   23 ILKIGEDIPFVGGLCTAVLNAKDMVDKASDNQAKLEKLCERCCGITVQVVEKLKGPTPLMVNVSPLEDCVKELEEVAERYGKKSCCTRLTHFQKDDEDIRDLEKRISTAIDDLTAAGVVEVGNLMQQQVGEILARLQPRPKLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYVKKI---VEQESLKCRVVADDVWEPPVVEKLRETGMWILLTARNPSMVEP--NERVFVDRLEKMEAQNVLRGAARLPPGQSLCDVAMKVLEVCGYVAMDIAFVGSWSSVRTVDNCAPKSSRAWAGVVAEI 424          
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 5.070e-42
Identity = 120/426 (28.17%), Postives = 198/426 (46.48%), Query Frame = 1
Query:   55 LGEELPVFKPILKNLRSAREKLTDVKVNREELAELIDRCTHVTAVLIVAVQEDLGTVDVTVLEDGVGAVERMVVNCGRGGKRSRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTADELAKV-------------------------------------------------------PTGTPRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQNTEVREAFSGGIVWMSVNN------------------VYTDILHGMGDPPSQS-----DNAISYIKKRMDKLE-GEGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDKMSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVRGRQDNAAWSDATMQV 1095
            +G+E+   +P+   L   ++   +++ N + LAEL + C  +T  ++V        +DVT L + V  +E +V +  R G  S+  F + + E + +L  R+  +V   + A    V EQ     A V                                                       P G  +    HV R HV++ V E      +P +V LVG+SG+GKT+ ASE+  +  +RE F  GIVWM                      V+ D+ + +G  PS +       A +YIK RM++   G G KCLVVAD+V E EV+  L ++GM+ L+T+RD +L   +GG  V++D ++ +E  L+L++AA+L      P+ A  +++LC++VAM++ FVGR + +R + D   W  A  ++
Sbjct:    1 MGKEIGFLQPVCAALGRMKDSWDEIQRNEDRLAELYELCEVITCFVVVKCDGGRNNIDVTPLSECVDDLEALVADYSRRGLCSK--FCNPDSEVIEQLGKRIENLVHVMELAATVVVSEQVGGVNAAVEDLRRQLEINWARNECLLAKHETMLEECTKNIERGIKSVLQQLPAPQAERDQAPEPKGVWKPED-HVIRRHVVARVCEYFDSANSPWMVALVGRSGAGKTSTASEMALHYHLRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKLGISPSAAVAAAEGTAAAYIKTRMEQGNAGRGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEI 423          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1144.1272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZY7_ECTSI3.170e-9444.15NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE3.440e-9445.18NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZW8_ECTSI1.990e-9144.28NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KLK9_9PHAE5.510e-8442.13NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KYW3_9PHAE3.370e-7356.73NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5J759_9PHAE4.550e-7145.27NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE4.000e-7040.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFN6_ECTSI7.620e-6235.36NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G330_ECTSI3.110e-4429.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU40_9PHAE5.070e-4228.17NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1144contigH-canaliculatus_F_contig1144:23875..25017 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.2
Seed ortholog evalue1.9e-86
Seed eggNOG ortholog2880.D7FZX2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Hectar predicted targeting categoryother localisation
Exons2
Model size1095
Cds size1095
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928827.9361043-CDS-H-canaliculatus_F_contig1144:23874..243141622928827.9361043-CDS-H-canaliculatus_F_contig1144:23874..24314Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1144 23875..24314 -
1696845580.6107228-CDS-H-canaliculatus_F_contig1144:23874..243141696845580.6107228-CDS-H-canaliculatus_F_contig1144:23874..24314Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1144 23875..24314 -
1622928827.9611864-CDS-H-canaliculatus_F_contig1144:24362..250171622928827.9611864-CDS-H-canaliculatus_F_contig1144:24362..25017Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1144 24363..25017 -
1696845580.6215773-CDS-H-canaliculatus_F_contig1144:24362..250171696845580.6215773-CDS-H-canaliculatus_F_contig1144:24362..25017Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1144 24363..25017 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1144.1272.1prot_H-canaliculatus_F_contig1144.1272.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1144 23875..25017 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1144.1272.1

>prot_H-canaliculatus_F_contig1144.1272.1 ID=prot_H-canaliculatus_F_contig1144.1272.1|Name=mRNA_H-canaliculatus_F_contig1144.1272.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=365bp
VAYKIGSVEVGAASFVMDLGEELPVFKPILKNLRSAREKLTDVKVNREEL
AELIDRCTHVTAVLIVAVQEDLGTVDVTVLEDGVGAVERMVVNCGRGGKR
SRAFFASRNKEAMAELNDRVNGVVSYFDAARVSTVKEQTADELAKVPTGT
PRVRSWHVERPHVISAVFEALICHGTPSLVGLVGQSGSGKTTAASEVVQN
TEVREAFSGGIVWMSVNNVYTDILHGMGDPPSQSDNAISYIKKRMDKLEG
EGSKCLVVADNVCEKEVITKLLETGMRILLTTRDEQLVADAGGNVVIVDK
MSTDEAELVLRRAAELPPYACLPSGAIDLIELCDFVAMDVAFVGRWATVR
GRQDNAAWSDATMQV
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mRNA from alignment at H-canaliculatus_F_contig1144:23875..25017-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1144.1272.1 ID=mRNA_H-canaliculatus_F_contig1144.1272.1|Name=mRNA_H-canaliculatus_F_contig1144.1272.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1143bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1144:23875..25017- (Hapterophycus canaliculatus Oshoro5f female)
GTCGCTTACAAGATAGGTTCGGTCGAGGTGGGCGCGGCATCCTTCGTTAT GGACCTGGGTGAGGAGTTGCCGGTGTTCAAGCCAATACTGAAGAACTTGA GGAGTGCCCGCGAAAAGTTGACGGACGTCAAAGTCAATCGTGAAGAGCTG GCAGAGCTTATCGACAGGTGCACGCACGTCACGGCGGTTCTCATCGTAGC GGTTCAGGAAGACCTCGGCACGGTTGATGTGACTGTTCTCGAGGACGGTG TCGGCGCTGTGGAAAGGATGGTCGTGAATTGTGGTCGAGGGGGCAAGCGC TCGAGGGCATTTTTTGCTTCTCGCAACAAAGAAGCCATGGCTGAATTGAA CGACCGCGTGAACGGCGTGGTGTCCTACTTCGATGCGGCTAGGGTTTCCA CCGTGAAAGAGCAGACAGCCGACGAGCTAGCCAAGGTTCCTACGGGCACA CCGCGCGTCCGGAGCTGGCATGTCGAACGCCCTCATGTGATATCGGCGGT GTTCGAGGCTCTCATCTGCCATGGAACTCCAAGTCTGGTGGGACTCGTTG GCCAAAGCGGGTCGGGCAAAACCACGGCTGCGTCTGAAGTCGTACAGAAT ACTGAGGTACGGGAGGCGTTCTCCGGCGGTATTGTGTGGATGTCGGTGAA TAATGGTGCCAGGGAGTGTCTCTCGACATTAGTGCTTGGGTTAGCCCGCA AAGTGTACACGGATATTCTGCACGGAATGGGCGACCCCCCGTCCCAATCT GACAACGCGATCTCCTACATCAAGAAACGAATGGATAAACTTGAAGGCGA AGGATCGAAGTGTCTCGTGGTGGCCGACAACGTGTGTGAGAAAGAGGTTA TCACGAAGCTGCTTGAGACTGGCATGCGGATTCTCCTCACGACCCGCGAC GAACAGTTAGTGGCGGACGCAGGGGGAAACGTGGTGATCGTCGACAAAAT GTCTACAGATGAGGCGGAGTTGGTTTTGAGGAGAGCGGCGGAGCTTCCAC CTTACGCATGCTTGCCCAGCGGTGCCATCGATTTGATCGAGCTTTGTGAC TTCGTGGCGATGGATGTGGCATTCGTTGGGCGATGGGCCACCGTTCGAGG CAGGCAAGACAACGCGGCTTGGTCGGACGCGACTATGCAGGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1144:23875..25017-

>mRNA_H-canaliculatus_F_contig1144.1272.1 ID=mRNA_H-canaliculatus_F_contig1144.1272.1|Name=mRNA_H-canaliculatus_F_contig1144.1272.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2190bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1144:23875..25017- (Hapterophycus canaliculatus Oshoro5f female)
GTCGCTTACAAGATAGGTTCGGTCGAGGTGGGCGCGGCATCCTTCGTTAT
GGACCTGGGTGAGGAGTTGCCGGTGTTCAAGCCAATACTGAAGAACTTGA
GGAGTGCCCGCGAAAAGTTGACGGACGTCAAAGTCAATCGTGAAGAGCTG
GCAGAGCTTATCGACAGGTGCACGCACGTCACGGCGGTTCTCATCGTAGC
GGTTCAGGAAGACCTCGGCACGGTTGATGTGACTGTTCTCGAGGACGGTG
TCGGCGCTGTGGAAAGGATGGTCGTGAATTGTGGTCGAGGGGGCAAGCGC
TCGAGGGCATTTTTTGCTTCTCGCAACAAAGAAGCCATGGCTGAATTGAA
CGACCGCGTGAACGGCGTGGTGTCCTACTTCGATGCGGCTAGGGTTTCCA
CCGTGAAAGAGCAGACAGCCGACGAGCTAGCCAAGGTTCCTACGGGCACA
CCGCGCGTCCGGAGCTGGCATGTCGAACGCCCTCATGTGATATCGGCGGT
GTTCGAGGCTCTCATCTGCCATGGAACTCCAAGTCTGGTGGGACTCGTTG
GCCAAAGCGGGTCGGGCAAAACCACGGCTGCGTCTGAAGTCGTACAGAAT
ACTGAGGTACGGGAGGCGTTCTCCGGCGGTATTGTGTGGATGTCGGTGAA
TAATGGTCGCTTACAAGATAGGTTCGGTCGAGGTGGGCGCGGCATCCTTC
GTTATGGACCTGGGTGAGGAGTTGCCGGTGTTCAAGCCAATACTGAAGAA
CTTGAGGAGTGCCCGCGAAAAGTTGACGGACGTCAAAGTCAATCGTGAAG
AGCTGGCAGAGCTTATCGACAGGTGCACGCACGTCACGGCGGTTCTCATC
GTAGCGGTTCAGGAAGACCTCGGCACGGTTGATGTGACTGTTCTCGAGGA
CGGTGTCGGCGCTGTGGAAAGGATGGTCGTGAATTGTGGTCGAGGGGGCA
AGCGCTCGAGGGCATTTTTTGCTTCTCGCAACAAAGAAGCCATGGCTGAA
TTGAACGACCGCGTGAACGGCGTGGTGTCCTACTTCGATGCGGCTAGGGT
TTCCACCGTGAAAGAGCAGACAGCCGACGAGCTAGCCAAGGTTCCTACGG
GCACACCGCGCGTCCGGAGCTGGCATGTCGAACGCCCTCATGTGATATCG
GCGGTGTTCGAGGCTCTCATCTGCCATGGAACTCCAAGTCTGGTGGGACT
CGTTGGCCAAAGCGGGTCGGGCAAAACCACGGCTGCGTCTGAAGTCGTAC
AGAATACTGAGGTACGGGAGGCGTTCTCCGGCGGTATTGTGTGGATGTCG
GTGAATAATGTGTACACGGATATTCTGCACGGAATGGGCGACCCCCCGTC
CCAATCTGACAACGCGATCTCCTACATCAAGAAACGAATGGATAAACTTG
AAGGCGAAGGATCGAAGTGTCTCGTGGTGGCCGACAACGTGTGTGAGAAA
GAGGTTATCACGAAGCTGCTTGAGACTGGCATGCGGATTCTCCTCACGAC
CCGCGACGAACAGTTAGTGGCGGACGCAGGGGGAAACGTGGTGATCGTCG
ACAAAATGTCTACAGATGAGGCGGAGTTGGTTTTGAGGAGAGCGGCGGAG
CTTCCACCTTACGCATGCTTGCCCAGCGGTGCCATCGATTTGATCGAGCT
TTGTGACTTCGTGGCGATGGATGTGGCATTCGTTGGGCGATGGGCCACCG
TTCGAGGCAGGCAAGACAACGCGGCTTGGTCGGACGCGACTATGCAGGTG
TGTACACGGATATTCTGCACGGAATGGGCGACCCCCCGTCCCAATCTGAC
AACGCGATCTCCTACATCAAGAAACGAATGGATAAACTTGAAGGCGAAGG
ATCGAAGTGTCTCGTGGTGGCCGACAACGTGTGTGAGAAAGAGGTTATCA
CGAAGCTGCTTGAGACTGGCATGCGGATTCTCCTCACGACCCGCGACGAA
CAGTTAGTGGCGGACGCAGGGGGAAACGTGGTGATCGTCGACAAAATGTC
TACAGATGAGGCGGAGTTGGTTTTGAGGAGAGCGGCGGAGCTTCCACCTT
ACGCATGCTTGCCCAGCGGTGCCATCGATTTGATCGAGCTTTGTGACTTC
GTGGCGATGGATGTGGCATTCGTTGGGCGATGGGCCACCGTTCGAGGCAG
GCAAGACAACGCGGCTTGGTCGGACGCGACTATGCAGGTG
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