mRNA_H-canaliculatus_F_contig11438.1267.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: D7FP08_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP08_ECTSI) HSP 1 Score: 318 bits (816), Expect = 7.170e-105 Identity = 164/206 (79.61%), Postives = 171/206 (83.01%), Query Frame = 1 Query: 142 RERVPVSEVADYLAHALTVNEVIYPVPPSPATIFLADSATA------AGGHGAXXXXXXXXXXXXXXXEQPGHTGGGVIVPALPSAPLLVNCASRTTVVHNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCYPRHK 741 R+RVPV EVA YL ALTVN+V+YP+PPSP+ IFLADSA A AGGHG +Q GH GGV VPALP APLLVNCASRTTVVHNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAA MVRVEECERMQLVTCCRRLTVTNSLECIFPVFVA+PPVL GDNRACQFAPYNSCYPRHK Sbjct: 11 RDRVPVCEVAQYLMGALTVNDVVYPIPPSPSAIFLADSAAATTATATAGGHGPDEAVPAVGGAAVGSEQQGGHACGGVTVPALPCAPLLVNCASRTTVVHNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHK 216
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A835Z1R1_9STRA (Tubulin binding cofactor C-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R1_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.550e-41 Identity = 118/263 (44.87%), Postives = 149/263 (56.65%), Query Frame = 1 Query: 22 RADFESLGFLLTGGASLETEREPGVGLADLCPLWNQGGRPRERVPVSEVADYLAHALTVNEVIYPVPPSPATIFLA---DSATAAGGHGAXXXXXXXXXXXXXXXEQPGHTGGG---------------------VIVPALPSAPLLVNCASRTTVVHNADASGPL-RDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCYPR 735 RAD +LGFL+ GG +L+ + L DLCPL G +EVAD+LA ALTVN+V+YP PP T A +S A XXXXXXXXXXXXXXX V PA PL+VN A+RTTV+H A A R LQV+ C ESYVY+L+ ++ATV+GC +CT+V+GAAA +VR+E+C R+ L+ CRR N EC ++ S P+ GDNRACQ APYN+ YPR Sbjct: 201 RADLSALGFLIAGGRALDDASQRD--LCDLCPLAGGGATRGPVGSAAEVADWLAAALTVNDVLYPAPPPLPTAAPALPLESLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVKXXXXXXXXTTEPVRVAAPARAGVPLVVNGAARTTVMHAAAAGARAERSLQVSHCHESYVYMLAPFQYATVLGCSECTIVVGAAAGVVRLEDCTRVTLIAACRRACAVNCCECALHLYAPSRPLFVGDNRACQVAPYNAAYPR 461
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A7S3XVC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVC9_HETAK) HSP 1 Score: 148 bits (373), Expect = 8.150e-40 Identity = 101/245 (41.22%), Postives = 133/245 (54.29%), Query Frame = 1 Query: 25 ADFESLGFLLTGGASLETEREPGVGLADLC-PLWNQGGRPRERVPVSEVADYLAHALTVNEVIYPVPPSPATIFLADSATAAG-GHGAXXXXXXXXXXXXXXXEQPGHTGGGVIVPALPSAPLLVNCASRTTVVHNADA-----------SGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYN 720 A+ + LGFL GA+ P L++L L++ G + EV ++L L++NEV+YP PP+P +S TAAG G G G I P APL+ N RTTV+H+ D S LR + VN C +SY+Y+L A + ATV+GC DCTVVIGA + MV V ECER+QLVTCCRRL + N L+ +FP A+PPVL GD+RAC+ AP N Sbjct: 2 AELDQLGFLF--GAARPGPGRPVPKLSELAGDLFSSGSSN-----IYEVREWLMGVLSLNEVLYPPPPAPT----GESFTAAGDGEGGVFEQPWQQEKAKAQALSKADEG---IYPE--PAPLVYNFVIRTTVMHDEDKKQDELGGEDSNSRQLRAVHVNHCHDSYIYLLGAFKSATVLGCTDCTVVIGAISGMVNVVECERIQLVTCCRRLVINNCLDSVFPTLAATPPVLHGDHRACRLAPPN 230
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A835YHX7_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX7_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.290e-36 Identity = 107/291 (36.77%), Postives = 139/291 (47.77%), Query Frame = 1 Query: 22 RADFESLGFLLTGGASLETEREPGV-GLADLCPLWN-QGGRPRERVPV-------------------SEVADYLAHALTVNEVIYPVPPSPATIFLADSATAA---------------GGHGAXXXXXXXXXXXXXXXEQPGHTGGGVIVPALPSA---------------PLLVNCASRTTVVHNADA-SGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSC-YPR 735 R D SLGFL+ GG +L+ +PG LADLC L + Q G EV +++A ALTVN+V+YPVPPSPA LAD+ A G H A PG GGG S PL++N A +TT+VH A A + R LQ+N C ESY+YVL+ +R AT++GC DCT+V+GA +RVE+C R+ LV RR+ N EC + + P+ GD RAC APYN+ YPR Sbjct: 256 RGDLSSLGFLIAGGHALD---DPGPWDLADLCALRHVQAGTAAAPXXXXXXXXXXXXXXXXXAAGSWGEVCEWVAAALTVNDVLYPVPPSPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFL----------SPGAPGGGAAAQRKGSISKPLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPR 533
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A7S0C5I7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5I7_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.940e-21 Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 421 HNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCY 729 ++ D G L DL V+ C + ++Y+L AT+ C DCT+V+GA A ++ V +CER+ + + RR+ V NSLE + F SPP+L GDNR+CQFAPYNS Y Sbjct: 53 NDVDLGGRLHDLTVSNCSDCHLYLLRPFEHATITACTDCTIVVGAVAGLLNVLDCERITITSAARRILVINSLEVLNCCFTPSPPLLVGDNRSCQFAPYNSYY 155
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A7S2M3W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M3W5_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.580e-20 Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 436 SGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCY 729 +G L DL+V C +++ Y+L A + C DCT+VIGA A +++V +CER + + RR+ V+NS + + +F SPP+L GDNR CQFAPYN+ Y Sbjct: 15 NGRLHDLRVADCSDTHFYLLQPFEHAIIAACTDCTIVIGAVAGVLQVVDCERTTITSAARRVIVSNSCDVVNYIFTPSPPLLVGDNRGCQFAPYNTYY 112
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A3L6F1J2_MAIZE (TBCC domain-containing protein 1 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6F1J2_MAIZE) HSP 1 Score: 97.1 bits (240), Expect = 7.250e-20 Identity = 47/112 (41.96%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 403 SRTTVV-HNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCYPR 735 S+T+VV H +D G ++V C +S +Y+L+ +++ATV GC D TVV+GA +V+VE CER+ ++ +R+ + N ECIF + V P++ GDN Q AP+N+CYP+ Sbjct: 109 SKTSVVKHASDVKG--NSIKVLNCHDSVIYILAPLKYATVYGCSDATVVLGAVGKVVKVEHCERVHIIAAAKRICIANCRECIFYIGVNHQPLVLGDNHKLQVAPFNTCYPQ 218
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A2Z6NN10_TRISU (TBCC domain-containing protein 1 n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NN10_TRISU) HSP 1 Score: 98.2 bits (243), Expect = 8.320e-20 Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 415 VVHNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCYPR 735 V H +D G ++V CQES +YVL+ +R+ATV GC D T+V+GA VRVE CER+ ++ +R+ + N EC+F + V P++ GDN Q APYN+CYP+ Sbjct: 306 VKHASDIKGS--SVKVLNCQESTIYVLAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLMIGDNHKLQVAPYNTCYPQ 410
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A6U6IXW2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IXW2_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 8.390e-20 Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 439 GPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCY 729 G L DL V+ C ++++Y+L AT+ C DCT+V+GA A ++ V +CER+ + + RR+ V+N + + VF SPP+L GDNRACQFAPYN+ Y Sbjct: 660 GRLHDLHVSECSDAHMYLLQPFEHATIAACTDCTIVVGAVAGLLHVVDCERVTITSAARRVLVSNCADVLHCVFTPSPPLLVGDNRACQFAPYNTYY 756
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Match: A0A446YQ64_TRITD (TBCC domain-containing protein 1 n=2 Tax=Triticinae TaxID=1648030 RepID=A0A446YQ64_TRITD) HSP 1 Score: 98.2 bits (243), Expect = 9.380e-20 Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 403 SRTTVV-HNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAAMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVASPPVLSGDNRACQFAPYNSCYPR 735 S+T+VV H +D G ++V C +S +Y+L+ +++ATV GC D TVV+GA +V+VE CER+Q+V +R+ + N ECIF + V P++ GDN Q AP+N+CYP+ Sbjct: 342 SKTSVVKHGSDIKG--HSIKVLNCHDSVIYILAPLKYATVYGCSDTTVVLGAIGKVVKVEHCERVQIVVASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTCYPQ 451 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11438.1267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11438.1267.1 >prot_H-canaliculatus_F_contig11438.1267.1 ID=prot_H-canaliculatus_F_contig11438.1267.1|Name=mRNA_H-canaliculatus_F_contig11438.1267.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=247bp SGRDDEPRADFESLGFLLTGGASLETEREPGVGLADLCPLWNQGGRPRERback to top mRNA from alignment at H-canaliculatus_F_contig11438:1130..3953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11438.1267.1 ID=mRNA_H-canaliculatus_F_contig11438.1267.1|Name=mRNA_H-canaliculatus_F_contig11438.1267.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2824bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11438:1130..3953- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11438:1130..3953- >mRNA_H-canaliculatus_F_contig11438.1267.1 ID=mRNA_H-canaliculatus_F_contig11438.1267.1|Name=mRNA_H-canaliculatus_F_contig11438.1267.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1482bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11438:1130..3953- (Hapterophycus canaliculatus Oshoro5f female)back to top |