mRNA_H-canaliculatus_F_contig1107.975.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 145 bits (365), Expect = 5.470e-34 Identity = 100/269 (37.17%), Postives = 125/269 (46.47%), Query Frame = 2 Query: 35 FRTVY-SATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFEDLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLNGRSALMWAAAGGHLAAAETLLAAGADVTIRNLVVSGTAAHQFDALDEASSRGHVSIIKAILRYGADVHACDYLGYGALHHA 838 F+ +Y ATPEQWA+WLR PLEHAAARGN LV+ L AGA+GG+GWRGCRGRT G DVNV S RSAL++A++ GH A + LI+A A VN D + LD G S LM A+ GGH + E LL AGAD+ +R+ +G A A+D A S+GHV +I+AI+ G +V A D G ALHHA Sbjct: 18 FKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRH---AGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHA 283
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE) HSP 1 Score: 130 bits (326), Expect = 6.420e-29 Identity = 96/265 (36.23%), Postives = 117/265 (44.15%), Query Frame = 2 Query: 47 YSATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFEDLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLNGRSALMWAAAGGHLAAAETLLAAGADVTIRNLVVSGTAAHQFDALDEASSRGHVSIIKAILRYGADVHACDYLGYGALHHAA 841 + ATPE+WA+WLR P EHAAARGN LV+ L AGADGG+GWRGCR RT PDVNV S +RSAL++A H A R L++A A + D V LD +G S LM A+ GH + E LL AGAD T R SG +H ALD A+++GHV ++KAIL G D A D G ALH+AA Sbjct: 23 FGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLASRNGHRSTVEVLLRAGADTT-RRATDSGDFSHMA-ALDVAAAQGHVRVVKAILGNGGDASAVDDHGCTALHYAA 285
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 122 bits (305), Expect = 2.210e-26 Identity = 64/113 (56.64%), Postives = 73/113 (64.60%), Query Frame = 2 Query: 47 YSATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFED 385 +SATP+QW +WLRVPLEHAAARGN LV+ L AGADG +GW+GCRGRT GAQPDVNV S +RS+LY AT+ GH A R LI A A VNFED Sbjct: 23 HSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFED 135
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 122 bits (305), Expect = 2.900e-26 Identity = 65/115 (56.52%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 47 YSATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFEDLV 391 YSATP+QW +WLR+PLEHAAARGN LV L GAGADG +GWRGCRGRT GAQ DVNV S +RSALY AT+ GH A R L+ A A V+FED V Sbjct: 23 YSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPV 137
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 116 bits (290), Expect = 2.600e-25 Identity = 93/278 (33.45%), Postives = 113/278 (40.65%), Query Frame = 2 Query: 26 SNSFRTV-YSATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFEDLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLNGRSALMWAAAGGHLAAAETLLAAGADVTIRNLVVSGTAAHQFDALDEASSRGHVSIIKAILRYGADVHACDYLGYGALHHAARYDQQ 856 S F+ V Y A+ EQWA+WLRVPLEHAA+RGN LV+ L AGAD G+GWRGCRGRT GA DVN + RSAL+ AT GH A + L+L A VNF D V + M A GHLA ETLL AGAD ++R + LD A+ + I++AIL G DV A D G ALH A + + Sbjct: 15 SEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCGLGKTTYV----------------------------TTFMLAVRRGHLAIVETLLEAGADCSLRQWA-------DYSPLDVAAEHRALPILEAILGRGVDVDAQDRAGCTALHTAVLFSDR 257
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: A0A6H5KKF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF4_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.110e-22 Identity = 93/263 (35.36%), Postives = 111/263 (42.21%), Query Frame = 2 Query: 53 ATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVN-----VSSRHPE-------RSALYMATLMGHVKAVRHLILARASVNFEDLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLNGRSALMWAAAGG---HLAAAETLLAAGADVTIRNLVVSGTAAHQFDALDEASSRGHVSIIKAILRYGADV 796 ATPEQWA+WLRVPLEHAAA+G+ LVD L GAGADG + ++GC GR AQPDVN +S H RS LY ATL GH R ILA A+VNF DL +D GRSAL+ A+ G H ETLLAAGAD++IRN + ALD AS GHV I A++R+G + Sbjct: 8 ATPEQWAEWLRVPLEHAAAQGSLVLVDKLLGAGADGSANYKGCAGRILRQAAAVGGSKGVVSSLLRARAQPDVNEFVDDLSVLHEGHQPFPNFRSPLYQATLNGHEATARLPILAGANVNFVDL-----------------WGGHSVIMSGADVRAHDSHDRTPLHLATMEGLDGIVSPLVFRGVDKDAVDKYGRSALIIASCVGDKAHSTVDETLLAAGADLSIRNNF-------RASALDSASLHGHVPTIHALVRHGVAI 246
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 110 bits (274), Expect = 2.490e-22 Identity = 72/113 (63.72%), Postives = 83/113 (73.45%), Query Frame = 2 Query: 47 YSATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFED 385 + ATPEQWADWLR PLEHAAARGN LV+ L AGADG +GWRGCRGRT XXXXXXXXXXXXXX G PDVNV S +RSAL++A + GH A R L++A A++ D Sbjct: 23 FCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVD 135
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 109 bits (272), Expect = 7.880e-22 Identity = 102/213 (47.89%), Postives = 115/213 (53.99%), Query Frame = 2 Query: 47 YSATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFEDLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLNGRSALMWAAAGGHLAAAETLLAAGADVTIR 685 Y ATPEQW +WLR PLEHAAARG LV+ L AGADGG+GW GCRGRT G PDVNV S RSAL+++ + GH A R LILA A N D XXXXXXXXXXXXXXXXXXXXXXXXXX LD +G S L A+ GHL+ +TLL AGADV++R Sbjct: 21 YGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMR 233
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.010e-20 Identity = 88/269 (32.71%), Postives = 111/269 (41.26%), Query Frame = 2 Query: 53 ATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFEDLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLNGRSALMWAAA---GGHLAAAETLLAAGADVTIRNLVVSGTAAHQFDALDEASSRGHVSIIKAILRYGADVHACDYLGYGALHHAARYD 850 ATPEQWA WLR PLEHAAA GN LVD L AG DG +GWRGCRGR+ G PDVNV + RSALY + L H A R LILA A VNF D + N S L+ + + GH+A + LLAAGAD IR+L AL A+ + ++KA+L +G DV+ + + LH AA+++ Sbjct: 23 ATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLA----------------NTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDL-------DSHSALVFAAQYERIDVMKALLEHGVDVNVGED-HWNPLHWAAQFN 267
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 103 bits (256), Expect = 4.810e-20 Identity = 59/115 (51.30%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 47 YSATPEQWADWLRVPLEHAAARGNAALVDVLRGAGADGGSGWRGCRGRTXXXXXXXXXXXXXXXXXXXXGAQPDVNVSSRHPERSALYMATLMGHVKAVRHLILARASVNFEDLV 391 YSATP+QW +WLRVPL+HAAARGN LV+ L AGADG +GW+ GAQPDVNV S +RSALY AT+ GH A R LI A A VNF+D V Sbjct: 23 YSATPQQWKEWLRVPLKHAAARGNLNLVNSLLEAGADGSAGWK--------------------------GAQPDVNVLSVSSKRSALYTATVCGHEDAARRLITAGADVNFDDPV 111 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1107.975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1107.975.1 >prot_H-canaliculatus_F_contig1107.975.1 ID=prot_H-canaliculatus_F_contig1107.975.1|Name=mRNA_H-canaliculatus_F_contig1107.975.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=279bp MATLMGHVKAVRHLILARASVNFEDLVEQRTVLHAASCGGHEQLVNESLIback to top mRNA from alignment at H-canaliculatus_F_contig1107:28024..29567- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1107.975.1 ID=mRNA_H-canaliculatus_F_contig1107.975.1|Name=mRNA_H-canaliculatus_F_contig1107.975.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1544bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1107:28024..29567- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1107:28024..29567- >mRNA_H-canaliculatus_F_contig1107.975.1 ID=mRNA_H-canaliculatus_F_contig1107.975.1|Name=mRNA_H-canaliculatus_F_contig1107.975.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1674bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1107:28024..29567- (Hapterophycus canaliculatus Oshoro5f female)back to top |