mRNA_H-canaliculatus_F_contig11067.969.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: A0A6H5KP25_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP25_9PHAE) HSP 1 Score: 461 bits (1187), Expect = 1.670e-153 Identity = 237/294 (80.61%), Postives = 264/294 (89.80%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPDLDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGRGFTSLS---AGLLEEPSAPLGGXXXXXQDLAGPGLFGS 873 ++ISADMGNFIHVNNYVL+AEHTPDLD+VV AKL+AAAGLVHLDQ++YAKAARKFVDV+PELGSSFD VVAPED+AVYGGLCALATFSR+EM++RVL+NASFKNFLDLVPQVRELTNDFANSRYRSCLKYLA+LKGDLQLDLHLH+HLD LYKM+EDKCLMQYFSPY+SVRLGAMSEAFGMEV E+E KVAAL+IS+Q+SARIDSTNATLHAKH +QR IS RKMHEMG+ YQRELR MLVRMSCMEHDFVVRG R TS S G+LEEPS+ +AG GLFG+ Sbjct: 238 IEISADMGNFIHVNNYVLRAEHTPDLDSVVKAKLRAAAGLVHLDQRDYAKAARKFVDVAPELGSSFDRVVAPEDIAVYGGLCALATFSREEMRQRVLDNASFKNFLDLVPQVRELTNDFANSRYRSCLKYLADLKGDLQLDLHLHRHLDTLYKMVEDKCLMQYFSPYSSVRLGAMSEAFGMEVPELEKKVAALVISNQISARIDSTNATLHAKHIEQRGISFRKMHEMGELYQRELRLMLVRMSCMEHDFVVRGSRSMTSSSLSTTGVLEEPSS-----------MAGLGLFGA 520
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: UPI000B8D17D8 (COP9 signalosome complex subunit 1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D17D8) HSP 1 Score: 270 bits (689), Expect = 1.570e-82 Identity = 132/257 (51.36%), Postives = 189/257 (73.54%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGR 768 + +S +MG F HV++YV KAE TP+ LD++ AKL+ A+GL HL+ K+Y AARKF+DV+PELGSS++ V+AP+D+A YGGLCALA+F R E+K +V++N +F+NFL+LVP+VREL NDF +S Y SCL YL LK +L D+HLH H++ LY I +K L+QY P+ SV L M+ AF VS +E ++ ALI +Q+ ARIDS N L+A+HADQR + +++ + G E+ R++R+ML+R + + H+F VR R Sbjct: 56 ILVSIEMGQFTHVSSYVSKAEQTPEALDSITVAKLRCASGLAHLEAKKYKLAARKFLDVAPELGSSYNEVIAPQDIATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEVRELINDFYSSHYASCLDYLGNLKANLLFDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLRMMANAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDRDVRAMLLRANLLRHEFNVRSSR 312
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: CSN1_ARATH (COP9 signalosome complex subunit 1 n=39 Tax=Brassicaceae TaxID=3700 RepID=CSN1_ARATH) HSP 1 Score: 273 bits (697), Expect = 4.760e-82 Identity = 134/257 (52.14%), Postives = 192/257 (74.71%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGR 768 + +S +MG F HV +YV KAE P+ L+ +V AKL+ A+GL HL+ K+Y AARKF+DV+PELG+S++ V+AP+D+A YGGLCALA+F R E+K++V++N +F+NFL+LVP VREL NDF +SRY SCL+YLA LK +L LD+HLH H+D LY I K L+QY P+ SV L M++AF VS +E ++ ALI +Q+ ARIDS N L+A+HADQR + +K+ +MG E+ R++R+ML+R + ++H++ R R Sbjct: 183 ILVSIEMGQFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAMLLRANLLKHEYHARSAR 439
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: A9RVN7_PHYPA (Predicted protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVN7_PHYPA) HSP 1 Score: 272 bits (695), Expect = 6.110e-82 Identity = 135/257 (52.53%), Postives = 193/257 (75.10%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPDL-DAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGR 768 + +S ++G+F+HV+NYV KA+ TPD+ D VV AKLK AAGL HL+ K+Y AARKFVD + ELGS++ V+AP+D+A YGGLCALA+F R E+K +V++N +F+NFL+LVP+VREL +DF SRY SCL YL +LK +L LD+HL+ H++ LY+ I K L+QY +P+ SV L M+ AF V+ +E ++AALI +Q+ ARIDS N L+A+HADQR + +++ + G ++QRE R+ML+R + M DFV++G R Sbjct: 167 ILVSIELGHFVHVSNYVSKADQTPDVQDPVVLAKLKCAAGLAHLESKKYKLAARKFVDTNFELGSNYSDVIAPQDVATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEVRELIHDFYASRYASCLGYLQKLKPNLLLDIHLYDHVETLYEQIRHKALIQYTNPFISVDLNTMASAFKTSVTGLEKELAALITENQIQARIDSHNKILYARHADQRNTTFQRVLQTGSDFQRETRAMLLRANLMRQDFVMKGNR 423
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: A0A0V0ID26_SOLCH (Putative COP9 signalosome complex subunit 1-like n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0ID26_SOLCH) HSP 1 Score: 266 bits (681), Expect = 1.650e-81 Identity = 130/257 (50.58%), Postives = 186/257 (72.37%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGR 768 + +S +MG F HV +YV KAE + D LDA+ AKL+ AAGL HL+ K+Y AARKF++V PELG+++ V+AP+D A YGGLCALA+F R E+K +V++N +F+NFL+LVP++REL +DF S Y SCL+YL LK +L LD+HLH H++ LY I K L+QY P+ SV L M+ AF V+ +E ++ ALI +Q+ ARIDS N L+A+HADQR + +K+ + GKE+ R++RSML+R + ++HD++ R R Sbjct: 44 ILVSIEMGQFTHVTSYVSKAEQSQDALDAITVAKLRCAAGLAHLEAKKYKLAARKFLEVGPELGNNYTEVIAPQDAATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEIRELIHDFYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRSKALIQYTHPFVSVDLNMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQTGKEFDRDVRSMLLRANLLKHDYIARTSR 300
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: A0A1Y1IKT1_KLENI (PCI domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKT1_KLENI) HSP 1 Score: 268 bits (686), Expect = 1.430e-80 Identity = 134/258 (51.94%), Postives = 191/258 (74.03%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGRG 771 + +S ++G+F++V NYV KAE TPD D V+ KLK AAGL HL+ K+Y AARKFVDV+ ELG+ + V+AP+D+A+YG LCALA+F R ++K +V++N SF+NFL+LVP +REL NDF SRY SCL YL +LK DL LD+HL H+D LY+ I K L+QY +P+ SV L M+ +F V+ +E ++AALI+ +Q+ ARIDS N L+A+HADQR S +K ++G +YQR+ +++L+R + M+HDFVV+ +G Sbjct: 171 ILVSIELGHFVNVTNYVQKAEQTPDNTDPVIQGKLKCAAGLAHLENKKYKLAARKFVDVNFELGTQYKKVIAPQDVALYGALCALASFDRADLKSKVIDNISFRNFLELVPDIRELINDFYASRYASCLGYLQKLKPDLLLDVHLFDHVDTLYEQIRHKALIQYTTPFISVDLNRMAASFKTNVAGLEKELAALIMENQIQARIDSHNKILYARHADQRNTSFQKALQVGADYQRDTKALLLRANLMQHDFVVKPKKG 428
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: M1CNN0_SOLTU (Cop11 protein n=12 Tax=Solanaceae TaxID=4070 RepID=M1CNN0_SOLTU) HSP 1 Score: 267 bits (683), Expect = 5.440e-80 Identity = 130/257 (50.58%), Postives = 187/257 (72.76%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGR 768 + +S +MG F HV +YV KAE + D LDA+ AKL+ AAGL HL+ K+Y AARKF++V PELG+++ V+AP+D+A YGGLCALA+F R E+K +V++N +F+NFL+LVP++REL +DF S Y SCL+YL LK +L LD+HLH H++ LY I K L+QY P+ SV L M+ AF V+ +E ++ ALI +Q+ ARIDS N L+A+HADQR + +K+ + GKE+ R++RSML+R + ++HD++ R R Sbjct: 182 ILVSIEMGQFTHVTSYVSKAEQSQDALDAITVAKLRCAAGLAHLEAKKYKLAARKFLEVGPELGNNYTEVIAPQDVATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEIRELIHDFYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRSKALIQYTHPFVSVDLNMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQTGKEFDRDVRSMLLRANLLKHDYIARTSR 438
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: A0A0A0L4A8_CUCSA (PCI domain-containing protein n=12 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L4A8_CUCSA) HSP 1 Score: 267 bits (682), Expect = 1.010e-79 Identity = 132/256 (51.56%), Postives = 186/256 (72.66%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGG 765 + +S +MG F HV +YV KAE TP+ LDA+ +AKL+ AAGL HL+ K+Y AARKF++ PELG+ ++ V+AP+D+A YGGLCALATF R E+K +V++N +F+NFL+LVP VREL NDF +S Y SCL YL LK +L LD+HLH H++ LY I K L+QY P+ SV L M+ AF V+ +E ++ LI ++Q+ ARIDS N L+A+HADQR + +++ + G E+ RE+RSML+R + ++HD+ RGG Sbjct: 191 ILVSIEMGQFTHVTSYVSKAEQTPEALDAITSAKLRCAAGLAHLEAKKYKLAARKFLETGPELGNHYNEVIAPQDVATYGGLCALATFDRSELKSKVIDNVNFRNFLELVPVVRELINDFYSSHYASCLDYLGNLKPNLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLHMMANAFKTSVAGLEKELETLITNNQIQARIDSHNKILYARHADQRNATFQRVLQSGSEFDREVRSMLLRANLIKHDYNQRGG 446
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: A0A7J7DDA7_TRIWF (COP9 signalosome complex subunit 1 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DDA7_TRIWF) HSP 1 Score: 266 bits (681), Expect = 1.110e-79 Identity = 133/257 (51.75%), Postives = 188/257 (73.15%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDFVVRGGR 768 + +S +MG F HV +YV KAE TP+ LD V AAKL+ AAGL HL+ K+Y AARKF++V PELG+S++ V+A +D+A YGGLCALA+F R E+K +V++N SF+NFL+LVP+VREL NDF +S Y SCL YL LK +L LD+HLH H++ LY +I +K L+QY P+ SV L M+ AF VS +E ++ ALI +Q+ ARIDS N L+A+HADQR + +++ + G E+ R++RSML+R + ++HD+ + R Sbjct: 183 ILVSIEMGQFTHVTSYVSKAEQTPEALDPVTAAKLRCAAGLSHLEAKKYKLAARKFLEVGPELGTSYNDVIAAQDVATYGGLCALASFDRMELKSKVIDNISFRNFLELVPEVRELINDFYSSHYASCLDYLGNLKANLLLDIHLHDHVETLYDLIRNKALIQYTHPFVSVDLCMMANAFKTSVSRLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRSMLLRANLIKHDYNSKSSR 439
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Match: A0A453J7U5_AEGTS (PCI domain-containing protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A453J7U5_AEGTS) HSP 1 Score: 262 bits (670), Expect = 1.190e-79 Identity = 130/251 (51.79%), Postives = 187/251 (74.50%), Query Frame = 1 Query: 1 VQISADMGNFIHVNNYVLKAEHTPD-LDAVVAAKLKAAAGLVHLDQKEYAKAARKFVDVSPELGSSFDGVVAPEDMAVYGGLCALATFSRDEMKRRVLENASFKNFLDLVPQVRELTNDFANSRYRSCLKYLAELKGDLQLDLHLHKHLDVLYKMIEDKCLMQYFSPYTSVRLGAMSEAFGMEVSEVESKVAALIISDQVSARIDSTNATLHAKHADQRAISCRKMHEMGKEYQRELRSMLVRMSCMEHDF 750 + +S ++G F HV NYV KAE TPD LDAV+ AKL+AAAGL +L+ K+Y AARKF++ PELGS++ V+AP+D+AVYG LCALA+F R E+K +V++N +F+NFL+LVP+VREL NDF SRY SCL++L +LK +L LD+HL +HL LY I K ++QY P+ SV L M+ AF VS +E ++AALI +++ ARIDS N L+A+HADQR + ++ + G E++R++++ML+R + ++HDF Sbjct: 55 ILVSIELGQFAHVTNYVSKAEQTPDTLDAVIVAKLRAAAGLANLETKKYKLAARKFLETGPELGSNYSEVIAPQDVAVYGALCALASFDRSELKSKVIDNINFRNFLELVPEVRELVNDFYASRYGSCLEHLEKLKPNLLLDIHLREHLGTLYNDIRHKAIIQYTLPFISVDLNTMASAFKSSVSMLEKELAALITENKIQARIDSHNKILYARHADQRNATFQRALQTGNEFERDIKAMLLRANLIKHDF 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11067.969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11067.969.1 >prot_H-canaliculatus_F_contig11067.969.1 ID=prot_H-canaliculatus_F_contig11067.969.1|Name=mRNA_H-canaliculatus_F_contig11067.969.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=359bp MGNFIHVNNYVLKAEHTPDLDAVVAAKLKAAAGLVHLDQKEYAKAARKFVback to top mRNA from alignment at H-canaliculatus_F_contig11067:266..4378+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11067.969.1 ID=mRNA_H-canaliculatus_F_contig11067.969.1|Name=mRNA_H-canaliculatus_F_contig11067.969.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4113bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11067:266..4378+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11067:266..4378+ >mRNA_H-canaliculatus_F_contig11067.969.1 ID=mRNA_H-canaliculatus_F_contig11067.969.1|Name=mRNA_H-canaliculatus_F_contig11067.969.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2154bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11067:266..4378+ (Hapterophycus canaliculatus Oshoro5f female)back to top |