mRNA_H-canaliculatus_F_contig1106.968.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: A0A6H5LG67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG67_9PHAE) HSP 1 Score: 138 bits (347), Expect = 8.000e-34 Identity = 74/207 (35.75%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 932 DASKKICLGCKGQKFVDGTRFQADMCESCELHVSISSAAPDKDEDKKKSRPFICFFCRTPIGHSVQYYRMLDPAGGTNRNGAPK----------------------------------------VQYVHGNGRQCVGKALPDASNLSCVNCAGSPPDLELHDMMGKGVKSHFYCTTTCA*EKRANILVEVQDLIESKRVEGESKDTP 1432 DAS+K CL CK F GT F+ + C +C++HVS+S + K+K R F+CF+CRT IG VQY+R+ DP G N +G K + Y+HG+G CVGK +P+ + C C D+ LHDMMG +FYC+ CA KRA+I+ +VQ+ E KR+E + TP Sbjct: 4 DASRKTCLQCKETDFGPGTLFRGEKCNACDMHVSLS-------QPKRKGRAFVCFYCRTDIGEGVQYFRLPDPTGKVNLDGTQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIHYIHGDGSHCVGKDVPEDNTAPCAGCDSD--DVVLHDMMGLRKTEYFYCSP-CAYTKRADIITDVQEFSEIKRLERMNGGTP 200
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: A0A6H5JCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW5_9PHAE) HSP 1 Score: 114 bits (284), Expect = 6.820e-25 Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 2 Query: 1544 EANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRV 1774 E NAID+ SA+DLPT ACLAVGA VV+HK+PQFVLLGVCNNSDGVI IELD REEY PG+++VYL Y P+R+ Sbjct: 29 EVNAIDNASADDLPTVACLAVGAAVVIHKSPQFVLLGVCNNSDGVIDSIELDQREEYHVHSNPGHSVVYLRYTPVRL 105
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI) HSP 1 Score: 115 bits (288), Expect = 8.570e-24 Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 2 Query: 1529 SGMGIEANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRVTIYNQCAYEAG 1807 +G+ E ++DD NDLPT ACLA+GAPVVLHK+PQFVLLGVCNNSDG+I GIELD RE Y A GY++V L Y PLR+ +Y + A AG Sbjct: 108 AGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGY-ASSTAGYSVVTLRYAPLRIFVYIKSADAAG 199
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 118 bits (295), Expect = 9.140e-24 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 2 Query: 1529 SGMGIEANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRVTIYNQCAYEAG 1807 +G+ E N++DD DLPT A LAVGAPVV+HK PQFVLLGVCNNSDG+I GIELD RE++L PGY++V L Y PLRV +Y + A +AG Sbjct: 2053 TGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAG 2145
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 114 bits (286), Expect = 6.450e-23 Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 2 Query: 1463 NRASVAIFIHLHHDSSSG*LVV--SGMGIEANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRVTIYNQCAYEAG 1807 N S F+HL +G+ E N++DD + DLPT A LAVGAPVV+HK PQFVLLGVCNNSDG+I GIELD E++L PGY++V L Y PL+V +Y + A +AG Sbjct: 563 NAPSPIPFLHLFFPQKPATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAG 679
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 115 bits (288), Expect = 6.460e-23 Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 2 Query: 1529 SGMGIEANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRVTIYNQCAYEAG 1807 +G+ E ++DD NDLPT ACLA+GAPVVLHK+PQFVLLGVCNNSDG+I GIELD RE Y A GY++V L Y PLR+ +Y + A AG Sbjct: 1815 AGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGY-ASSTAGYSVVTLRYAPLRIFVYIKSADAAG 1906
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: A0A6H5L437_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L437_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.590e-19 Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 1505 SSSG*LVVSGMG-IEANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRVTIYNQCAYEAG 1807 +SSG VV+ E N +DD LP + CLAVG P+V++K+PQ VLLGVCNNSDG++ IEL RE+ + GY +V+L YPP+RV ++ + A +AG Sbjct: 2 NSSGMSVVADQKRSEVNPLDDAKTKGLPRQLCLAVGIPIVVYKSPQHVLLGVCNNSDGIVRAIELYQREQ-VQNHNDGYRVVHLKYPPVRVFVHIESADDAG 102
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.360e-16 Identity = 48/92 (52.17%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 1532 GMGIEANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRVTIYNQCAYEAG 1807 G+ E +++DD NDLPT ACLA+GAPVVLHK PQFV+LGVCNNSDG+I GIE+ REE V +Y Q AY+AG Sbjct: 1700 GLRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE--------------------VFVYIQTAYDAG 1771
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 1.170e-15 Identity = 42/88 (47.73%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 1544 EANAIDDTSANDLPTKACLAVGAPVVLHKTPQFVLLGVCNNSDGVIHGIELDDREEYLAQRRPGYALVYLHYPPLRVTIYNQCAYEAG 1807 E N++DDT DLP + CLAVG P+V+HK+PQ VLLGVC+N DG++ IELD RE+ + GY +V+L + P+RV ++ + ++G Sbjct: 1307 EVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQ-IQNHDGGYRVVHLKHLPVRVFVHIESMDDSG 1393 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1106.968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1106.968.1 >prot_H-canaliculatus_F_contig1106.968.1 ID=prot_H-canaliculatus_F_contig1106.968.1|Name=mRNA_H-canaliculatus_F_contig1106.968.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=324bp MGEDCPDGKYLNVFALFLFVRSRFVAAGMMDVGPDFVLPLLPEMVFLGNKback to top mRNA from alignment at H-canaliculatus_F_contig1106:27751..30443+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1106.968.1 ID=mRNA_H-canaliculatus_F_contig1106.968.1|Name=mRNA_H-canaliculatus_F_contig1106.968.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2693bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1106:27751..30443+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1106:27751..30443+ >mRNA_H-canaliculatus_F_contig1106.968.1 ID=mRNA_H-canaliculatus_F_contig1106.968.1|Name=mRNA_H-canaliculatus_F_contig1106.968.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1944bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1106:27751..30443+ (Hapterophycus canaliculatus Oshoro5f female)back to top |