mRNA_H-canaliculatus_F_contig10986.901.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10986.901.1
Unique NamemRNA_H-canaliculatus_F_contig10986.901.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: A0A0A1I5X3_GEOCN (Cytochrome c oxidase subunit 3 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0A1I5X3_GEOCN)

HSP 1 Score: 462 bits (1188), Expect = 3.550e-163
Identity = 233/265 (87.92%), Postives = 256/265 (96.60%), Query Frame = 1
Query:   16 MLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            MLN+HRQNYQLHPFHLVDNSP P+FTSFTLFGLAMNSALTMHGY+GTSL VVLN++TLVYVMFL FRDIVSEGTYLGNHTVEVRNG+NLGF+LF+VSETLFFIG+F AFGHSA+APTVEIGA+ PPLG+EA+GPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLF+T+ALAV+FM+CQY+EY+TSSFT+ADGVFGSVFYMGTGFHGLHV VGI+MLSISY R+ NYHSTKTHHLGFHTSVLYYHFVDVV LFLF+LFY
Sbjct:    1 MLNMHRQNYQLHPFHLVDNSPWPMFTSFTLFGLAMNSALTMHGYMGTSLWVVLNMMTLVYVMFLWFRDIVSEGTYLGNHTVEVRNGMNLGFMLFMVSETLFFIGMFWAFGHSAMAPTVEIGAMWPPLGMEAMGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFMTMALAVMFMMCQYMEYMTSSFTMADGVFGSVFYMGTGFHGLHVTVGIMMLSISYWRMWNYHSTKTHHLGFHTSVLYYHFVDVVWLFLFMLFY 265          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: A0A023UMQ8_9ASCO (Cytochrome c oxidase subunit 3 n=4 Tax=Dipodascaceae TaxID=34353 RepID=A0A023UMQ8_9ASCO)

HSP 1 Score: 412 bits (1060), Expect = 1.480e-143
Identity = 203/269 (75.46%), Postives = 240/269 (89.22%), Query Frame = 1
Query:    4 KNNIMLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            KN  MLN+HRQ YQLHPFHLV+NSP PI TSF++FGLAMN+ALT HGYIG S  V+L++I + Y++FL FRDI+SEGTYLGNHT+ VRNG+NLGF+LF+VSE +FF+G+F AFGHSA+ PTVE+G + PPLG+EAIGPT+LPLLNT+LLLSSGATLTYSHHYLINGNR+HAL GLFIT+ LAV+FM+CQYIEY T+SFT++DGVFGSVFY+GTGFHG HVL+G+IMLSISY R+ NYHST  HHLGFHTSVLYYHFVDVV L LF+L Y
Sbjct:    5 KNVTMLNMHRQQYQLHPFHLVENSPWPILTSFSMFGLAMNTALTSHGYIGNSWWVMLSMINVTYMLFLWFRDIISEGTYLGNHTLAVRNGMNLGFMLFMVSECMFFLGMFWAFGHSALNPTVELGGVWPPLGMEAIGPTELPLLNTMLLLSSGATLTYSHHYLINGNRWHALFGLFITVLLAVMFMMCQYIEYTTASFTMSDGVFGSVFYLGTGFHGFHVLMGMIMLSISYWRMWNYHSTNNHHLGFHTSVLYYHFVDVVWLILFMLVY 273          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: K9L3C0_MAGMU (Cytochrome c oxidase subunit 3 n=2 Tax=Magnusiomyces magnusii TaxID=43963 RepID=K9L3C0_MAGMU)

HSP 1 Score: 400 bits (1028), Expect = 9.880e-139
Identity = 201/270 (74.44%), Postives = 234/270 (86.67%), Query Frame = 1
Query:    1 MKNNIMLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            M  N+MLNI+RQ YQ HPFHLV+NSP P F SF+LFGLAMN+ALTMHGYIG+S+ V+L I+ LVY M L FRD+++EGTYLG+HT+ VRNGINLGFILFIVSE LFF GIF +FGHSAI+PT+E+GA+ PP+GIEAI  TDLPLLNT+LLLSSGATLTYSHHYLINGNR  ALLGL  T+ LA  F +CQYIEY T++FTIADGVFGSVFYMGTGFHG+HV+VG IMLS++  RI +YHST THHLG+HTS LY+HFVDVV LFLF+LFY
Sbjct:    1 MNKNVMLNINRQAYQAHPFHLVENSPWPFFVSFSLFGLAMNTALTMHGYIGSSIWVILGIVCLVYSMALWFRDVIAEGTYLGHHTLAVRNGINLGFILFIVSEGLFFFGIFWSFGHSAISPTIELGAMWPPMGIEAIQATDLPLLNTILLLSSGATLTYSHHYLINGNRKQALLGLLFTLVLAASFTVCQYIEYRTATFTIADGVFGSVFYMGTGFHGIHVIVGGIMLSVALWRIYSYHSTNTHHLGYHTSALYWHFVDVVWLFLFVLFY 270          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: A0A023UPR3_9ASCO (Cytochrome c oxidase subunit 3 n=1 Tax=Magnusiomyces capitatus TaxID=1095183 RepID=A0A023UPR3_9ASCO)

HSP 1 Score: 389 bits (998), Expect = 4.040e-134
Identity = 188/270 (69.63%), Postives = 238/270 (88.15%), Query Frame = 1
Query:    4 KNNIMLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLING-NRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            K+NIMLNI+RQNYQLHPFHLV+NSP P F+SF+LFGLAMN+ALT HGY+ +S+ V+L I+ + Y MFL FRD+V+EGTYLGNHT+ VRNGINLGFILF+VSE LFFIG+F AFGHSAI+PTVE+GA+ PP+GIEA+GPTDLPLLNT+LLLSSGATLTYSHHYLING NR+  L GLF+T+ LAV FM+CQY+EY T+SFTIADG+FGSVFY+GTGFH +H+++G++ LS+S+ R+ +Y +T +HH+G+  +V+Y+HFVDVV L  F++FY
Sbjct:    4 KSNIMLNIYRQNYQLHPFHLVENSPWPFFSSFSLFGLAMNTALTSHGYMQSSIWVILGIVCVAYSMFLWFRDMVAEGTYLGNHTLAVRNGINLGFILFVVSEALFFIGMFWAFGHSAISPTVEMGAVWPPVGIEAMGPTDLPLLNTMLLLSSGATLTYSHHYLINGGNRFQVLFGLFLTMLLAVAFMLCQYMEYTTASFTIADGIFGSVFYLGTGFHAMHIMIGVMFLSMSFWRMYSYQTTSSHHIGYELAVIYWHFVDVVWLMTFVVFY 273          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: UPI001BEF6FF2 (cytochrome c oxidase subunit 3 n=1 Tax=Saprochaete fungicola TaxID=1734004 RepID=UPI001BEF6FF2)

HSP 1 Score: 349 bits (895), Expect = 1.420e-118
Identity = 181/265 (68.30%), Postives = 200/265 (75.47%), Query Frame = 1
Query:   16 MLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            M NI+RQ YQ HPFH V+NSP P FTSF+ FGLAMN+A T HGYI  S  VV   +T+ Y M   FRD+VSEGTY G+HT  VRNGIN GFI FIVSET FF GIF A+ HSAI+PTVE GA  PP GIEAI  TD P  NT+   SSGAT TYSHHY INGNRYHA +G  ITI LAV F ICQYIEY T+SFTIADGV+GSVFY GTGFHG HV+ G+IM S+S  RI NYHST  HH GFHTSV YYHFVDVV  F F++FY
Sbjct:    1 MTNINRQGYQAHPFHTVENSPWPFFTSFSTFGLAMNTATTAHGYISGSTWVVTGTVTVTYSMGTWFRDVVSEGTYTGHHTTAVRNGINTGFITFIVSETTFFAGIFWAYIHSAISPTVETGAAWPPTGIEAIQATDTPTTNTITTTSSGATXTYSHHYTINGNRYHATVGTTITITLAVTFTICQYIEYRTASFTIADGVYGSVFYTGTGFHGTHVITGVIMTSVSTWRIWNYHSTNAHHTGFHTSVTYYHFVDVVWTFTFVVFY 265          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: A0A023UP71_9ASCO (Cytochrome c oxidase subunit 3 n=1 Tax=Magnusiomyces tetraspermus TaxID=1232584 RepID=A0A023UP71_9ASCO)

HSP 1 Score: 336 bits (861), Expect = 2.490e-113
Identity = 167/270 (61.85%), Postives = 201/270 (74.44%), Query Frame = 1
Query:    1 MKNNIMLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            M  N+MLNI+RQ YQ HPFH V+NSP P F SF+ FG AMN++ TMHGYIG+S+ V+   + + Y M   FRD+V+EGTY G+HT  VRNGIN GFI F+VSE +FF GIF AFGHSAI+PTVE GA+ PP+GIEAI  TD P  NT+     GAT TYSHHY INGNR HA  G   T   A+ F +CQYIEY T++FTIADGVFGSVFYMGTGFHGLHV+VG IM +++  R+ NYHST +HH G+H S  Y+HFVDVV  F F++ Y
Sbjct:    1 MNKNVMLNINRQAYQAHPFHTVENSPWPFFVSFSTFGTAMNTSTTMHGYIGSSIWVITGTVCVAYSMGTWFRDVVAEGTYTGHHTTAVRNGINTGFITFVVSEVMFFSGIFWAFGHSAISPTVETGAVWPPMGIEAIQATDTPTTNTITTXXXGATTTYSHHYTINGNRKHATTGTVFTTVTAISFTVCQYIEYRTATFTIADGVFGSVFYMGTGFHGLHVIVGGIMTAVATWRVYNYHSTDSHHTGYHVSATYWHFVDVVWTFTFVVVY 270          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: UPI001BEE30AF (cytochrome c oxidase subunit 3 n=1 Tax=Saprochaete suaveolens TaxID=44074 RepID=UPI001BEE30AF)

HSP 1 Score: 326 bits (835), Expect = 1.870e-109
Identity = 166/265 (62.64%), Postives = 197/265 (74.34%), Query Frame = 1
Query:   16 MLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            MLNI+RQ YQ HP+H V+NSP P F SF+ FG AMN+A TMHGYIG+S+ V+  I+  VY M   FRD+++EGTY G+HT+ VRNGIN GF  FI+SE  FF+GIF +FGHSAI+PTVE GA+ PP+GIEAI  TD P  NT+          YSHHY INGNR  A  G   T  LA  F ICQYIEY T++FTI DGVFGSVFYMGTGFHG+HV+VG IMLSI+  RI +YHST THH G+HTS LY+HFVDVV  F F++FY
Sbjct:    1 MLNINRQAYQAHPYHTVENSPWPFFVSFSTFGTAMNTATTMHGYIGSSIWVITGIVCTVYSMSTWFRDVIAEGTYTGHHTLAVRNGINTGFTTFILSEATFFLGIFWSFGHSAISPTVETGAMWPPMGIEAIQATDTPTTNTITXXXXXXXXXYSHHYTINGNRKQATTGTVFTTILAGSFTICQYIEYRTATFTITDGVFGSVFYMGTGFHGIHVIVGGIMLSIALWRIYSYHSTNTHHTGYHTSALYWHFVDVVWTFTFVVFY 265          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: COX3_YARLI (Cytochrome c oxidase subunit 3 n=8 Tax=Yarrowia TaxID=4951 RepID=COX3_YARLI)

HSP 1 Score: 324 bits (830), Expect = 1.040e-108
Identity = 159/264 (60.23%), Postives = 205/264 (77.65%), Query Frame = 1
Query:   19 LNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            +N+  + +Q+HPFHLV  SP PI  SF++  + +     MHG++  +  VV + I  +  M L FRDI+SE TYLG+HT+ VR G+N+GFILF+VSE  FFI IF AF HSA+APT+E+G + PP+GIEAIGP++LPLLNT+LLL SGATLT+SHH L+ GNR++ LLGL +TIALAV FMICQY+EY  + FTI+DG+FGSVFY GTGFHGLH+++GIIML +S  RI  Y  T  HH+G+ TS+LYYHFVDVV LFL+I+FY
Sbjct:    1 MNLTLKKFQVHPFHLVAPSPWPILVSFSVMSIMLTLVFNMHGFMHNNYWVVFSAIVAIMTMALWFRDIISEATYLGDHTLAVRKGLNIGFILFVVSELFFFIAIFWAFFHSAMAPTIELGGVWPPVGIEAIGPSELPLLNTILLLCSGATLTWSHHALLGGNRFNTLLGLILTIALAVTFMICQYMEYSNAPFTISDGIFGSVFYFGTGFHGLHIIIGIIMLGVSLWRIYTYQLTNNHHVGYETSILYYHFVDVVWLFLYIVFY 264          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: A0A060RCV0_BLAAD (Cytochrome c oxidase subunit 3 n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060RCV0_BLAAD)

HSP 1 Score: 306 bits (784), Expect = 2.420e-101
Identity = 157/268 (58.58%), Postives = 202/268 (75.37%), Query Frame = 1
Query:   31 RQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLING--------NRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            R  YQ+ P+HLV+ SP PIFT+F++FGL  N AL MHGYIG      LNII L Y + L  RD+V+E TYLG HT+ VR GIN+GFILFIVSE LFF G+F A+GHSA+APTVE+GA+ PP+ IEAIGP +LPLLNT++LL+SGAT+T+SHH  I G        NR  AL+ L +TI LA+IF  CQYIEY  ++FTI+DGVFGSVFY+GTG H  H++ G + LS+++ R+  YH T+THH+G+ T++L +HF+DVV L LF+ FY
Sbjct:   23 RDKYQIFPYHLVEVSPWPIFTAFSIFGLTFNFALIMHGYIGIVNIFWLNIICLTYSICLWVRDVVTESTYLGWHTLAVRRGINIGFILFIVSEALFFAGVFWAYGHSALAPTVELGAVWPPVNIEAIGPLELPLLNTIILLASGATITHSHHTFIAGYTNNIKTSNRNAALISLGLTILLALIFSACQYIEYTNAAFTISDGVFGSVFYLGTGLHATHIITGTMFLSVAFWRMYAYHFTETHHVGYETTILMWHFLDVVWLILFVFFY 290          
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Match: R4ZXX0_9SACH (Cytochrome c oxidase subunit 3 n=1 Tax=Lachancea mirantina TaxID=1230905 RepID=R4ZXX0_9SACH)

HSP 1 Score: 301 bits (771), Expect = 9.840e-100
Identity = 153/265 (57.74%), Postives = 201/265 (75.85%), Query Frame = 1
Query:   16 MLNIHRQNYQLHPFHLVDNSP*PIFTSFTLFGLAMNSALTMHGYIGTSL*VVLNIITLVYVMFL*FRDIVSEGTYLGNHTVEVRNGINLGFILFIVSETLFFIGIF*AFGHSAIAPTVEIGAI*PPLGIEAIGPTDLPLLNTLLLLSSGATLTYSHHYLINGNRYHALLGLFITIALAVIFMICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*RI*NYHSTKTHHLGFHTSVLYYHFVDVV*LFLFILFY 810
            M ++ R  +Q  PFHLV  SP PI  SF+L  LA++ ALTMHG++ +   V L +    Y   L FRDI++E TYLG+HT+ VR GINLGF+LF+VSE L F G+F A+ HSA++PT E+G + PP+GI+A+ PT+LPLLNT++LL+SGAT+TYSHH LI GNR +AL GLFIT  L +IF+ CQYIEY  +SFTI DGV+GSVFY GTG H LH+++ I+MLSI+Y R+ NYH T  HHLG+ T++LY H +DV+ LFL+I+FY
Sbjct:    1 MTHLERSKHQQFPFHLVAPSPWPIVVSFSLLSLALSLALTMHGFVSSMNLVWLALTVTAYSATLWFRDIIAEATYLGDHTIAVRKGINLGFLLFVVSEVLIFGGLFWAYFHSAMSPTFELGGVWPPVGIDAVQPTELPLLNTIILLASGATITYSHHALIEGNRNNALSGLFITTWLIIIFVTCQYIEYTNASFTITDGVYGSVFYAGTGLHFLHMVMLIVMLSINYWRMRNYHLTSGHHLGYETTILYLHVLDVIWLFLYIVFY 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10986.901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A1I5X3_GEOCN3.550e-16387.92Cytochrome c oxidase subunit 3 n=1 Tax=Geotrichum ... [more]
A0A023UMQ8_9ASCO1.480e-14375.46Cytochrome c oxidase subunit 3 n=4 Tax=Dipodascace... [more]
K9L3C0_MAGMU9.880e-13974.44Cytochrome c oxidase subunit 3 n=2 Tax=Magnusiomyc... [more]
A0A023UPR3_9ASCO4.040e-13469.63Cytochrome c oxidase subunit 3 n=1 Tax=Magnusiomyc... [more]
UPI001BEF6FF21.420e-11868.30cytochrome c oxidase subunit 3 n=1 Tax=Saprochaete... [more]
A0A023UP71_9ASCO2.490e-11361.85Cytochrome c oxidase subunit 3 n=1 Tax=Magnusiomyc... [more]
UPI001BEE30AF1.870e-10962.64cytochrome c oxidase subunit 3 n=1 Tax=Saprochaete... [more]
COX3_YARLI1.040e-10860.23Cytochrome c oxidase subunit 3 n=8 Tax=Yarrowia Ta... [more]
A0A060RCV0_BLAAD2.420e-10158.58Cytochrome c oxidase subunit 3 n=1 Tax=Blastobotry... [more]
R4ZXX0_9SACH9.840e-10057.74Cytochrome c oxidase subunit 3 n=1 Tax=Lachancea m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10986contigH-canaliculatus_F_contig10986:507..1316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score62.4
Seed ortholog evalue6.6e-08
Seed eggNOG ortholog4572.TRIUR3_03852-P1
KEGG koko:K02262
KEGG TC3.D.4.11,3.D.4.7,3.D.4.8
KEGG Pathwayko00190,ko01100,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00154
EggNOG free text desc.Subunits I, II and III form the functional core of the enzyme complex
EggNOG OGs37QER@33090,3G8C5@35493,3M1P3@4447,COG1845@1,KOG4664@2759
COG Functional cat.C
Best tax levelLiliopsida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03029
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size810
Cds size141
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10986.901.1prot_H-canaliculatus_F_contig10986.901.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10986 1065..1205 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928770.7323203-UTR-H-canaliculatus_F_contig10986:506..10641622928770.7323203-UTR-H-canaliculatus_F_contig10986:506..1064Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10986 507..1064 +
1696845557.294411-UTR-H-canaliculatus_F_contig10986:506..10641696845557.294411-UTR-H-canaliculatus_F_contig10986:506..1064Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10986 507..1064 +
1622928770.7715378-UTR-H-canaliculatus_F_contig10986:1205..13161622928770.7715378-UTR-H-canaliculatus_F_contig10986:1205..1316Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10986 1206..1316 +
1696845557.3161201-UTR-H-canaliculatus_F_contig10986:1205..13161696845557.3161201-UTR-H-canaliculatus_F_contig10986:1205..1316Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10986 1206..1316 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928770.7521448-CDS-H-canaliculatus_F_contig10986:1064..12051622928770.7521448-CDS-H-canaliculatus_F_contig10986:1064..1205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10986 1065..1205 +
1696845557.3068337-CDS-H-canaliculatus_F_contig10986:1064..12051696845557.3068337-CDS-H-canaliculatus_F_contig10986:1064..1205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10986 1065..1205 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10986.901.1

>prot_H-canaliculatus_F_contig10986.901.1 ID=prot_H-canaliculatus_F_contig10986.901.1|Name=mRNA_H-canaliculatus_F_contig10986.901.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=47bp
MICQYIEYITSSFTIADGVFGSVFYMGTGFHGLHVLVGIIMLSISY*
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mRNA from alignment at H-canaliculatus_F_contig10986:507..1316+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10986.901.1 ID=mRNA_H-canaliculatus_F_contig10986.901.1|Name=mRNA_H-canaliculatus_F_contig10986.901.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=810bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10986:507..1316+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAAAATAATATTATGTTAAATATACATAGACAAAATTATCAATTACA TCCATTTCATTTAGTGGATAACTCACCATGACCAATATTTACATCATTTA CATTATTTGGTTTAGCTATGAATTCAGCATTAACAATGCATGGTTATATA GGTACTAGTTTATGAGTAGTATTAAATATAATAACATTAGTTTATGTAAT GTTTTTATGATTTAGAGATATTGTAAGTGAAGGTACTTATTTAGGTAATC ATACAGTTGAAGTAAGAAATGGTATAAATTTAGGATTTATATTATTTATA GTTTCTGAAACATTATTCTTTATTGGTATATTCTGAGCATTTGGACATTC AGCTATAGCTCCTACTGTAGAAATTGGTGCAATATGACCACCTTTAGGTA TAGAAGCAATAGGTCCAACAGATTTACCTTTATTAAATACTTTATTATTA TTATCATCTGGTGCTACTTTAACATATAGTCATCATTATTTAATTAATGG TAATAGATATCATGCATTATTAGGATTATTTATAACAATAGCATTAGCTG TAATATTTATGATATGTCAATATATAGAATATATAACATCATCATTTACA ATAGCTGATGGTGTATTTGGATCTGTATTCTATATGGGAACTGGGTTCCA TGGATTACACGTTCTAGTTGGTATTATAATGTTAAGTATCTCTTATTGAA GAATATGAAATTATCATTCAACTAAAACACATCATTTAGGATTCCATACA TCAGTATTATATTATCATTTTGTTGATGTTGTATGATTATTCTTATTCAT ATTATTCTAT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10986:507..1316+

>mRNA_H-canaliculatus_F_contig10986.901.1 ID=mRNA_H-canaliculatus_F_contig10986.901.1|Name=mRNA_H-canaliculatus_F_contig10986.901.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=282bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10986:507..1316+ (Hapterophycus canaliculatus Oshoro5f female)
ATGATATGTCAATATATAGAATATATAACATCATCATTTACAATAGCTGA
TGGTGTATTTGGATCTGTATTCTATATGGGAACTGGGTTCCATGGATTAC
ACGTTCTAGTTGGTATTATAATGTTAAGTATCTCTTATTGAATGATATGT
CAATATATAGAATATATAACATCATCATTTACAATAGCTGATGGTGTATT
TGGATCTGTATTCTATATGGGAACTGGGTTCCATGGATTACACGTTCTAG
TTGGTATTATAATGTTAAGTATCTCTTATTGA
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