mRNA_H-canaliculatus_F_contig10943.871.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10943.871.1
Unique NamemRNA_H-canaliculatus_F_contig10943.871.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: D8LEE8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE8_ECTSI)

HSP 1 Score: 508 bits (1309), Expect = 1.130e-175
Identity = 253/273 (92.67%), Postives = 261/273 (95.60%), Query Frame = 1
Query:  190 ATGAGTKVHVEGMKVTPLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            ATGAG+KVH+EGMKVTPLKDFA + MPAEVMKYV LRGW +PTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAM+KIFK MK G K+EGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDII YCA  S RQTAMFSATWPKSIRDLAAEFL +PVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHK+R
Sbjct:  142 ATGAGSKVHIEGMKVTPLKDFASSGMPAEVMKYVTLRGWDKPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMSKIFKNMKAGKKSEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIIGYCAGPSKRQTAMFSATWPKSIRDLAAEFLADPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKSR 414          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A835YU16_9STRA (DEAD box RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU16_9STRA)

HSP 1 Score: 311 bits (798), Expect = 6.520e-98
Identity = 170/268 (63.43%), Postives = 193/268 (72.01%), Query Frame = 1
Query:  211 VHVEGMKVTPLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIF--KKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            + VEGM VTPL DF  A  PA+++ YV  + ++ PT IQ++CWPVL AGRD++GIAETGSGKTL F LP + ++   K    G     P MLVLAPTRELA+QSAEVIA AG   G+   CVYGGVPK +QK AL   R       VVATPGRLKDL+ EGA DLS V  +VLDEADRMLDLGFEQDVRDII   A A  RQTAMFSATWP+ IR LAAEFLR PV+VTVG DDLTAN RV QHVEV+ ERERD +LL LL   H  R
Sbjct:  190 ITVEGMDVTPLADFDGAGFPAKLLAYVLAQKFERPTPIQSYCWPVLGAGRDIVGIAETGSGKTLAFGLPGLTRVLAQKGGSGGXXGARPEMLVLAPTRELAIQSAEVIAAAGAAAGVACACVYGGVPKGEQKRALRSAR------AVVATPGRLKDLMSEGAVDLSGVVYMVLDEADRMLDLGFEQDVRDIIG--ATARARQTAMFSATWPREIRALAAEFLREPVRVTVGDDDLTANARVAQHVEVIGERERDARLLELLEKVHGAR 449          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: H3G5S8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S8_PHYRM)

HSP 1 Score: 278 bits (710), Expect = 2.070e-87
Identity = 148/257 (57.59%), Postives = 187/257 (72.76%), Query Frame = 1
Query:  238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            P+  F D +  A+ MK  + +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P M  I  + +   K+ GP MLV+APTRELA+QS+ VI+EAG  CG+KS+C+YGGVPK  QK AL  G     V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R II   +    RQ AMFSATWP+SI+ LA EFL NPVKVT+G+D+L A+  V Q VEV+++R RD +   LL   H +R
Sbjct:    3 PVLSFDDVTFEAKFMK--STKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGMIHIAAQPEVSLKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIRSIIG--STHPERQIAMFSATWPQSIQKLAHEFLNNPVKVTIGSDELAASVNVTQIVEVIDDRARDARAHALLQKYHSSR 250          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A7S3XUU1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU1_HETAK)

HSP 1 Score: 278 bits (710), Expect = 1.380e-85
Identity = 151/262 (57.63%), Postives = 183/262 (69.85%), Query Frame = 1
Query:  238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGS----KNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYC----AEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCH 999
            P + F +A  P EV+      G+  PT IQA CWP+L+AGRD+IG+AETGSGKTL FSLPA+A+I +++  G     +  GP MLV+ PTRELA Q A VI  AG   G++SVCVYGGVPK +QK  L   +GG    VVVATPGRL+DL+ E A DL +V  LVLDEADRMLDLGFEQD+R II  C    A A GR+TAMFSATWP+ +R+LAAEFL  PV+VT+G   L AN RV Q VEV+ ERER  +L +LL   H
Sbjct:  144 PHQTFGEAGFPPEVLG--GCEGFTAPTPIQAQCWPILSAGRDLIGVAETGSGKTLAFSLPALARIHRELGGGKALSRQRPGPLMLVICPTRELAQQCAAVIETAGAGAGLRSVCVYGGVPKHEQKRKLQNAQGG--AHVVVATPGRLRDLMSENAVDLGRVAHLVLDEADRMLDLGFEQDMRAIIGACPAPGAAAGGRRTAMFSATWPREVRELAAEFLDRPVRVTIGGSKLAANARVSQCVEVMGERERGARLQQLLERYH 401          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: UPI000C784A6A (DEAD-box ATP-dependent RNA helicase 5-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C784A6A)

HSP 1 Score: 276 bits (705), Expect = 2.550e-85
Identity = 147/261 (56.32%), Postives = 189/261 (72.41%), Query Frame = 1
Query:  229 KVTPLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTG-SKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            K  P+  F +      +MK  +   +  PT IQA CWPVL +GRD+IGIAETGSGKTL F++PA+A I ++M T   K +GP ML++APTRELA+QS EV+ EA     I+S+CVYGGVPK  Q+  L  G     V+VVVATPGRL DL+ EG CDLS+V+ LVLDEADRMLD GFE+D+R II    ++  RQTA+FSATWP S+R+LA EFL+NP+KVT+G+DDL A  R++Q VEV+E+R R+ KL +LL   HK+R
Sbjct:  109 KFKPILTFPELGFSKSIMKICSK--FDRPTPIQAQCWPVLGSGRDIIGIAETGSGKTLAFTIPALAHIKERMSTEPGKKKGPMMLIIAPTRELAMQSQEVLEEASNIVKIRSICVYGGVPKHSQRHGLKSG-----VEVVVATPGRLIDLMEEGCCDLSEVSYLVLDEADRMLDQGFERDIRKIIEKTHKS--RQTALFSATWPDSVRELAHEFLKNPIKVTIGSDDLAAGSRIKQIVEVIEDRAREQKLDKLLKEYHKSR 360          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A5D6YE84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE84_9STRA)

HSP 1 Score: 276 bits (707), Expect = 3.670e-85
Identity = 148/257 (57.59%), Postives = 185/257 (71.98%), Query Frame = 1
Query:  238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            P++ FAD +  A+ +K     G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P +  I  +     K  GP MLV+APTRELA+QS+EVI +AG  CG++S C+YGGVPK +QK  L  G     V VVVATPGRLKDL+ E ACDLSKVT +VLDEADRMLD GFE+D+R II   A    RQ AMFSATWP+SI+ LA EFL +PVKVT+G+DDL A+  V Q VEVV++R RD ++  LL   H +R
Sbjct:  156 PIRSFADVTFDAKFLK--TTAGFSKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPALSPKFSGPRMLVVAPTRELAMQSSEVITQAGKQCGLRSTCIYGGVPKHEQKKILRNG-----VHVVVATPGRLKDLLEERACDLSKVTFVVLDEADRMLDEGFEKDIRRIIG--ATHPERQIAMFSATWPQSIQKLAHEFLVDPVKVTIGSDDLAASQNVTQLVEVVDDRGRDARVHTLLQKYHSSR 403          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: D0MT79_PHYIT (DEAD/DEAH box RNA helicase, putative n=19 Tax=Phytophthora TaxID=4783 RepID=D0MT79_PHYIT)

HSP 1 Score: 275 bits (703), Expect = 1.210e-84
Identity = 147/257 (57.20%), Postives = 187/257 (72.76%), Query Frame = 1
Query:  238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            P+  F D +  ++ MK    +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P +  I  + +   K+ GP MLV+APTRELA+QS+ VI+EAG  CG+KS+C+YGGVPK  QK AL  G     V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R II   +    RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A++ V Q VEVVE+R RD +   LL   H +R
Sbjct:  148 PVLSFDDVTFESKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPEVSHKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLNDPVKVTIGSDELAASHNVTQIVEVVEDRARDSRAHALLQKYHASR 395          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A484DY05_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY05_BRELC)

HSP 1 Score: 275 bits (702), Expect = 1.300e-84
Identity = 146/257 (56.81%), Postives = 185/257 (71.98%), Query Frame = 1
Query:  238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            P+  F D S   + MK    +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL F++P +  I  +     K+ GP MLV+APTRELA+QS+ VI+EAG  CG+KS+C+YGGVPK  QK AL  G     V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R IIS+      RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A+  V Q VEV+++R RD +   LL   H +R
Sbjct:  137 PVLSFKDISFEPKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFAIPGLIHIAAQSGVSPKHPGPLMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEEHSCNLSKVTFMVLDEADRMLDEGFEKDIRGIISHTHPE--RQIAMFSATWPQSIQKLAYEFLNDPVKVTIGSDELAASQNVTQIVEVIDDRARDARAHALLQKYHSSR 384          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: M4BN34_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN34_HYAAE)

HSP 1 Score: 272 bits (695), Expect = 1.580e-83
Identity = 146/257 (56.81%), Postives = 185/257 (71.98%), Query Frame = 1
Query:  238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            P+  F D +  ++ M     +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL F+LP +  I  +    SK  GP MLV+APTRELA+QS+ VI+EAG  CG+KSVC+YGGVPK  QK AL  G     V VVVATPGRLKDLV E  C+LSKVT +VLDEADRMLD GFE+D+R II   +    RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A++ V Q VEV+++R RD ++  LL   H +R
Sbjct:  140 PVLSFQDVTFDSKFMN--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFALPGLIHIAAQPAVSSKFPGPRMLVVAPTRELAMQSSAVISEAGRKCGLKSVCIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEERCCNLSKVTFVVLDEADRMLDEGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLTDPVKVTIGSDELAASHNVTQLVEVIDDRARDARVHALLQKYHSSR 387          
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: G4ZE15_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZE15_PHYSP)

HSP 1 Score: 272 bits (695), Expect = 1.890e-83
Identity = 146/257 (56.81%), Postives = 186/257 (72.37%), Query Frame = 1
Query:  238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008
            P+  F D +  A+ MK    +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P +  I  +     K+ GP MLV+APTRELA+QS+ VI+EAG  CG+KS+C+YGGVPK+ QK AL  G     V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R II   +    RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A+  V Q VEV+++R RD +   LL   H +R
Sbjct:  148 PVLSFDDVTFEAKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPAVSPKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKQAQKKALRDG-----VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDDGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLNDPVKVTIGSDELAASGNVTQIVEVIDDRARDARAHALLQKYHSSR 395          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE8_ECTSI1.130e-17592.67DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YU16_9STRA6.520e-9863.43DEAD box RNA helicase n=1 Tax=Tribonema minus TaxI... [more]
H3G5S8_PHYRM2.070e-8757.59Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S3XUU1_HETAK1.380e-8557.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI000C784A6A2.550e-8556.32DEAD-box ATP-dependent RNA helicase 5-like n=1 Tax... [more]
A0A5D6YE84_9STRA3.670e-8557.59Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D0MT79_PHYIT1.210e-8457.20DEAD/DEAH box RNA helicase, putative n=19 Tax=Phyt... [more]
A0A484DY05_BRELC1.300e-8456.81Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
M4BN34_HYAAE1.580e-8356.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
G4ZE15_PHYSP1.890e-8356.81Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10943contigH-canaliculatus_F_contig10943:643..4274 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score511.1
Seed ortholog evalue3.8e-142
Seed eggNOG ortholog2880.D8LEE8
Preferred nameDBP3
KEGG koko:K07466,ko:K14811
KEGG Pathwayko03030,ko03420,ko03430,ko03440,ko03460,map03030,map03420,map03430,map03440,map03460
KEGG ModuleM00288
GOsGO:0000027,GO:0000166,GO:0000460,GO:0000463,GO:0000464,GO:0000466,GO:0000469,GO:0000470,GO:0000478,GO:0000479,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03000,ko03009,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-00_002030.1
Exons5
Model size1010
Cds size1008
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10943.871.1prot_H-canaliculatus_F_contig10943.871.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10943 643..4274 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928765.7256882-CDS-H-canaliculatus_F_contig10943:642..8521622928765.7256882-CDS-H-canaliculatus_F_contig10943:642..852Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 643..852 +
1696845555.1747057-CDS-H-canaliculatus_F_contig10943:642..8521696845555.1747057-CDS-H-canaliculatus_F_contig10943:642..852Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 643..852 +
1622928765.7409968-CDS-H-canaliculatus_F_contig10943:1317..15541622928765.7409968-CDS-H-canaliculatus_F_contig10943:1317..1554Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 1318..1554 +
1696845555.1860251-CDS-H-canaliculatus_F_contig10943:1317..15541696845555.1860251-CDS-H-canaliculatus_F_contig10943:1317..1554Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 1318..1554 +
1622928765.7524793-CDS-H-canaliculatus_F_contig10943:2147..24051622928765.7524793-CDS-H-canaliculatus_F_contig10943:2147..2405Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 2148..2405 +
1696845555.194436-CDS-H-canaliculatus_F_contig10943:2147..24051696845555.194436-CDS-H-canaliculatus_F_contig10943:2147..2405Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 2148..2405 +
1622928765.7635279-CDS-H-canaliculatus_F_contig10943:3369..35491622928765.7635279-CDS-H-canaliculatus_F_contig10943:3369..3549Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 3370..3549 +
1696845555.2025893-CDS-H-canaliculatus_F_contig10943:3369..35491696845555.2025893-CDS-H-canaliculatus_F_contig10943:3369..3549Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 3370..3549 +
1622928765.7746408-CDS-H-canaliculatus_F_contig10943:4151..42741622928765.7746408-CDS-H-canaliculatus_F_contig10943:4151..4274Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 4152..4274 +
1696845555.2122946-CDS-H-canaliculatus_F_contig10943:4151..42741696845555.2122946-CDS-H-canaliculatus_F_contig10943:4151..4274Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10943 4152..4274 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10943.871.1

>prot_H-canaliculatus_F_contig10943.871.1 ID=prot_H-canaliculatus_F_contig10943.871.1|Name=mRNA_H-canaliculatus_F_contig10943.871.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=336bp
AKKSKKSKETEAATAEPDESAGGKKKKKKKKNKDKSSSSASSSGDGGDAV
ANASAAAAAAGGAATGAGTKVHVEGMKVTPLKDFADASMPAEVMKYVNLR
GWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKT
GSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQK
IALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDL
GFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGA
DDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR
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mRNA from alignment at H-canaliculatus_F_contig10943:643..4274+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10943.871.1 ID=mRNA_H-canaliculatus_F_contig10943.871.1|Name=mRNA_H-canaliculatus_F_contig10943.871.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3632bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10943:643..4274+ (Hapterophycus canaliculatus Oshoro5f female)
GCGAAGAAATCCAAGAAGAGCAAGGAGACGGAGGCGGCCACGGCCGAACC AGACGAATCCGCCGGCGGTAAGAAGAAGAAGAAGAAGAAAAAGAACAAGG ACAAGTCGTCGTCGTCGGCTTCCTCTTCCGGGGACGGGGGAGATGCCGTC GCCAACGCCAGCGCGGCGGCGGCGGCGGCGGGTGGGGCGGCCACCGGAGC GGGCACCAAGGTAAGGGTGGGGAAAGACGACATTGGGTTTAGCGCATGCT GCGGGCACGCAGGGTTTCCGAGCCCTCCAACATCGTGGGTTGTGTTGTGT TGTGGAGCACTGATCCGGGCGTGCAAAAGCTTTTTGTCCGCATGTTGCGA GATGTTTTGATCAGCGCGTATCGCTGCGGGTCGTCATGGGAGAACGCAGG AGAGCTGTGTAAAGCCTGCATACGACGAAGGTGTCTATCAAGCAACAGAG CAAATGCCCGCACTTAGCTCGTCCCCCGTGTCTCCCATCTCCGTGCCTCT GGCCAACGCACACAAACACACACGTGCCCGAAACATGTTGTCCGAGCCTT CCACATGAATGAACCCTCATTGTTTGGAACTCAACGGAAGCCTCGAGCTA CGCCTCGCACAACGTGCTTTACCTCAGGAGCTGTTCTTACGGTGTCGCTG TGTTGCTCTTATCCTTCGAATCAAGGTGCACGTGGAGGGGATGAAGGTGA CCCCGCTGAAAGACTTCGCGGACGCCAGCATGCCGGCGGAGGTGATGAAG TACGTCAACCTCAGGGGCTGGAAGGAGCCGACGCTCATCCAGGCGCACTG CTGGCCGGTGCTGAACGCCGGGAGGGACGTGATCGGTATCGCCGAGACCG GTTCGGGAAAGACGCTCGGCTTCAGCCTGCCCGCGATGGCGAAGATCTTC AAGAAGATGAAGGTGACGCGAGCGCTGTTTTATTTTGGACGGGACAGCGT GTTGGGGGCGTGGTGTGCGGGGCGGCGGTGAGATGGGAAGCTGTGGATGG TATCGGTGAGGCGGCAGCGAGATTTGAGAGCGCTTTGGGTGACCACCTAC GTGCACGAACACGGGCAACTCTTCCCTCAGAGTTGCCGCCCGAGAGGTGC GAACAGCCCCGCGGTTGCGAGGTTCCAGCCCCGGCCAGGCATAAGCACTC TACACCGTGAGGATAAGCTCGAGCAGACGAATCAGCTGCGAACCTAGCGC TCGACTTTCTCATCGCAACAATTCGGAGCTTGGAAGCGCGAGCGGTCTGG GGCTGGATGGTATGCGGCGGTGGAGATGCCGGGGCGAAAATGGCGTGCCT TCCGTCCTTGTCACGAGCGCGTCTCTCCGCCCGCCTTGTGTTCAAGCCCT CTCTCGTCGTGGAACACGCCTGCGACGCGCAGGCGGCATCCCTCACCCTC ACCCGCCCCTCCGGCGACGTTCTTCCAGGGCACGACCCCCGCCCCTTACC AACGATCGATGCCACACAACTGACCTCACCTTCCCGCCCAACGATAACGC CGCAGACGGGCAGCAAGAACGAAGGGCCGTACATGCTTGTCCTGGCCCCG ACCCGAGAGCTGGCCCTGCAGAGTGCCGAGGTCATCGCGGAGGCGGGGGG CCACTGCGGCATCAAGAGCGTCTGCGTCTACGGAGGCGTGCCGAAGCGGG ACCAGAAGATCGCGCTGGGGGGCGGGAGGGGTGGCGGCTGCGTCCAGGTG GTGGTGGCGACGCCGGGGCGGCTGAAGGATCTCGTGGGGGAGGGGGCTTG CGACCTGTCCAAGGTACCCAGGGCTAGGCCTTTCTATTCCAAAGCTTGCG CCGGCCTGCTGGTGTGTTTGCTGGGTTTCTCGATGGCGTTGGTAGTACTG AGCTGGCGTCGGCGCCATGCGCTATCGATGTTGAGCACCGCCCGAACCTT GTGGCTTTTGTGTTGGCCCACGGGACGATGATGCTCTTGCTTTGGTCCTC CATACGCTCAACGCTTACCGTAGCAGCAGCAGCAGCAGAAGCAGCAGCAG CAGCCGTGGCGCGCTGTCACTGCGGTGTCACGACGCAAGTATTCGTTCGC GGAGGAGAGATCTAGGCCATCATCCACTCACGAAGAAGATCGACCACGTG CTTTTGGAGGCGGGCGTGTGCGGCAAGGATGATGCCCGGAGTCGCTTGAG TTTTGAGAGCGGTAGCGTTGGGGGGGGGGGGGCATCGCGGGGGGGGGTCC GTTCTGTTTGTTCGCCACCTTGTCTACCTCGAGAATGCTTGTCGCGGGGG TTTCCGGAGTCTCCGAGAAGAAATCGGGCCATCGTGTTGTGCGTCCATTT CGGTTTTGCAGAGCTGCGATCGACAGGTTTCGCCGCAGGGGATTGGGGCG GGGCTCCGTAGCTCAATGGGACCTTGTCGTCCTGTTGTTTGGAGCCACAG CTGTGGCCACTACCAGTCGACGTGACAGCAGCTACGAGCGACTCTGTACG TTTTTCTCGTCTCCTTCTTGACACTCAATCTTCCGCTGCGTCTTGTCGGT GACGGGATTGGTGTCCGTGTTTGTGTGGGGGCGGATTCGTCCGGGTTACA CGTTATCCCGCGGAGAATCGACGGCGCTTCTCGATGTGCGGGTGTGCGGA TGATTGTCGCCAACGCTGCTGCTGCCGCCTCCGCCACCGCTGTGCGTGTG ATTGTTGCGTCTGAAGCAACGACCAGACCAGACCAACAACAGCACAACAC CAACACCAACAACACCAACAAAAACAGGTCACGTCCTTGGTCCTCGACGA GGCGGACCGCATGCTCGACCTGGGGTTCGAGCAAGACGTCCGGGACATCA TCAGCTACTGCGCGGAGGCGTCCGGCCGACAGACGGCCATGTTCTCGGCA ACCTGGCCCAAGTCCATCCGGGACCTTGCAGCAGAGTTTCTCAGGAACCC CGTAAAGGTGAGAAAGGCAGATACCTGGGGACGGTGACGGGGGGGGGCGG GCGCGTTGTTTTACCACTTGTCGATGGTCGAGATTGAGATCGGCATACCT CTGTAGCGTTTCTATCTCGATTATGGCACAGCCGGGCCCCTACTGCGGTT TGCTCCTCGTTCAAGGCGTCATTTGTCGATGGTTCGCGGATCCCCGGGCG AGAGGAGAGGGGAGAGGAGGGGGGCAATTATGGAGGCTCCGAAGGGTGAT CGACGTTGGTACGCTTGCTCGCCGTCAAGCTATCCACCGTCTTGTCTTGC AGCCTCTGCTAGAGCGTTTACGAGCGTCCCTCGCTCCTGAGAAGTGCAGC CGTGTGATCCCCCGCGGCTGCGGCCTGCGGCGTGGCACGTTGAGACCGGT TACATTTTCATGCGTGTTACAACGTCATGTTGGTGTACGTCTCCCTCTTT CTCTCATCGCTCATGGTTCATTGTGTGATTTTGTCCTTCCCTTAAAGTGT GGTATCTGCTTCGTGTTCCTGCTGCTGTTCCCTTGTTTTCTGTTCGTCTC GTCTCGTGTCCCCCTGTCGTGACCATCTTCACGTTTGCTTCTCCTCCTCT TCCCATCAGGTGACCGTTGGCGCCGACGACCTAACCGCAAACTACCGCGT AGAGCAGCACGTGGAGGTTGTCGAAGAACGAGAACGAGATGGGAAGCTCC TCCGGCTACTAGCCACGTGCCACAAGACCAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10943:643..4274+

>mRNA_H-canaliculatus_F_contig10943.871.1 ID=mRNA_H-canaliculatus_F_contig10943.871.1|Name=mRNA_H-canaliculatus_F_contig10943.871.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2016bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10943:643..4274+ (Hapterophycus canaliculatus Oshoro5f female)
GCGAAGAAATCCAAGAAGAGCAAGGAGACGGAGGCGGCCACGGCCGAACC
AGACGAATCCGCCGGCGGTAAGAAGAAGAAGAAGAAGAAAAAGAACAAGG
ACAAGTCGTCGTCGTCGGCTTCCTCTTCCGGGGACGGGGGAGATGCCGTC
GCCAACGCCAGCGCGGCGGCGGCGGCGGCGGGTGGGGCGGCCACCGGAGC
GGGCACCAAGGCGAAGAAATCCAAGAAGAGCAAGGAGACGGAGGCGGCCA
CGGCCGAACCAGACGAATCCGCCGGCGGTAAGAAGAAGAAGAAGAAGAAA
AAGAACAAGGACAAGTCGTCGTCGTCGGCTTCCTCTTCCGGGGACGGGGG
AGATGCCGTCGCCAACGCCAGCGCGGCGGCGGCGGCGGCGGGTGGGGCGG
CCACCGGAGCGGGCACCAAGGTGCACGTGGAGGGGATGAAGGTGACCCCG
CTGAAAGACTTCGCGGACGCCAGCATGCCGGCGGAGGTGATGAAGTACGT
CAACCTCAGGGGCTGGAAGGAGCCGACGCTCATCCAGGCGCACTGCTGGC
CGGTGCTGAACGCCGGGAGGGACGTGATCGGTATCGCCGAGACCGGTTCG
GGAAAGACGCTCGGCTTCAGCCTGCCCGCGATGGCGAAGATCTTCAAGAA
GATGAAGGTGCACGTGGAGGGGATGAAGGTGACCCCGCTGAAAGACTTCG
CGGACGCCAGCATGCCGGCGGAGGTGATGAAGTACGTCAACCTCAGGGGC
TGGAAGGAGCCGACGCTCATCCAGGCGCACTGCTGGCCGGTGCTGAACGC
CGGGAGGGACGTGATCGGTATCGCCGAGACCGGTTCGGGAAAGACGCTCG
GCTTCAGCCTGCCCGCGATGGCGAAGATCTTCAAGAAGATGAAGACGGGC
AGCAAGAACGAAGGGCCGTACATGCTTGTCCTGGCCCCGACCCGAGAGCT
GGCCCTGCAGAGTGCCGAGGTCATCGCGGAGGCGGGGGGCCACTGCGGCA
TCAAGAGCGTCTGCGTCTACGGAGGCGTGCCGAAGCGGGACCAGAAGATC
GCGCTGGGGGGCGGGAGGGGTGGCGGCTGCGTCCAGGTGGTGGTGGCGAC
GCCGGGGCGGCTGAAGGATCTCGTGGGGGAGGGGGCTTGCGACCTGTCCA
AGACGGGCAGCAAGAACGAAGGGCCGTACATGCTTGTCCTGGCCCCGACC
CGAGAGCTGGCCCTGCAGAGTGCCGAGGTCATCGCGGAGGCGGGGGGCCA
CTGCGGCATCAAGAGCGTCTGCGTCTACGGAGGCGTGCCGAAGCGGGACC
AGAAGATCGCGCTGGGGGGCGGGAGGGGTGGCGGCTGCGTCCAGGTGGTG
GTGGCGACGCCGGGGCGGCTGAAGGATCTCGTGGGGGAGGGGGCTTGCGA
CCTGTCCAAGGTCACGTCCTTGGTCCTCGACGAGGCGGACCGCATGCTCG
ACCTGGGGTTCGAGCAAGACGTCCGGGACATCATCAGCTACTGCGCGGAG
GCGTCCGGCCGACAGACGGCCATGTTCTCGGCAACCTGGCCCAAGTCCAT
CCGGGACCTTGCAGCAGAGTTTCTCAGGAACCCCGTAAAGGTCACGTCCT
TGGTCCTCGACGAGGCGGACCGCATGCTCGACCTGGGGTTCGAGCAAGAC
GTCCGGGACATCATCAGCTACTGCGCGGAGGCGTCCGGCCGACAGACGGC
CATGTTCTCGGCAACCTGGCCCAAGTCCATCCGGGACCTTGCAGCAGAGT
TTCTCAGGAACCCCGTAAAGGTGACCGTTGGCGCCGACGACCTAACCGCA
AACTACCGCGTAGAGCAGCACGTGGAGGTTGTCGAAGAACGAGAACGAGA
TGGGAAGCTCCTCCGGCTACTAGCCACGTGCCACAAGACCAGGGTGACCG
TTGGCGCCGACGACCTAACCGCAAACTACCGCGTAGAGCAGCACGTGGAG
GTTGTCGAAGAACGAGAACGAGATGGGAAGCTCCTCCGGCTACTAGCCAC
GTGCCACAAGACCAGG
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