mRNA_H-canaliculatus_F_contig10943.871.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: D8LEE8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE8_ECTSI) HSP 1 Score: 508 bits (1309), Expect = 1.130e-175 Identity = 253/273 (92.67%), Postives = 261/273 (95.60%), Query Frame = 1 Query: 190 ATGAGTKVHVEGMKVTPLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 ATGAG+KVH+EGMKVTPLKDFA + MPAEVMKYV LRGW +PTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAM+KIFK MK G K+EGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDII YCA S RQTAMFSATWPKSIRDLAAEFL +PVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHK+R Sbjct: 142 ATGAGSKVHIEGMKVTPLKDFASSGMPAEVMKYVTLRGWDKPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMSKIFKNMKAGKKSEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIIGYCAGPSKRQTAMFSATWPKSIRDLAAEFLADPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKSR 414
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A835YU16_9STRA (DEAD box RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU16_9STRA) HSP 1 Score: 311 bits (798), Expect = 6.520e-98 Identity = 170/268 (63.43%), Postives = 193/268 (72.01%), Query Frame = 1 Query: 211 VHVEGMKVTPLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIF--KKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 + VEGM VTPL DF A PA+++ YV + ++ PT IQ++CWPVL AGRD++GIAETGSGKTL F LP + ++ K G P MLVLAPTRELA+QSAEVIA AG G+ CVYGGVPK +QK AL R VVATPGRLKDL+ EGA DLS V +VLDEADRMLDLGFEQDVRDII A A RQTAMFSATWP+ IR LAAEFLR PV+VTVG DDLTAN RV QHVEV+ ERERD +LL LL H R Sbjct: 190 ITVEGMDVTPLADFDGAGFPAKLLAYVLAQKFERPTPIQSYCWPVLGAGRDIVGIAETGSGKTLAFGLPGLTRVLAQKGGSGGXXGARPEMLVLAPTRELAIQSAEVIAAAGAAAGVACACVYGGVPKGEQKRALRSAR------AVVATPGRLKDLMSEGAVDLSGVVYMVLDEADRMLDLGFEQDVRDIIG--ATARARQTAMFSATWPREIRALAAEFLREPVRVTVGDDDLTANARVAQHVEVIGERERDARLLELLEKVHGAR 449
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: H3G5S8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S8_PHYRM) HSP 1 Score: 278 bits (710), Expect = 2.070e-87 Identity = 148/257 (57.59%), Postives = 187/257 (72.76%), Query Frame = 1 Query: 238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 P+ F D + A+ MK + +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P M I + + K+ GP MLV+APTRELA+QS+ VI+EAG CG+KS+C+YGGVPK QK AL G V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R II + RQ AMFSATWP+SI+ LA EFL NPVKVT+G+D+L A+ V Q VEV+++R RD + LL H +R Sbjct: 3 PVLSFDDVTFEAKFMK--STKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGMIHIAAQPEVSLKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIRSIIG--STHPERQIAMFSATWPQSIQKLAHEFLNNPVKVTIGSDELAASVNVTQIVEVIDDRARDARAHALLQKYHSSR 250
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A7S3XUU1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU1_HETAK) HSP 1 Score: 278 bits (710), Expect = 1.380e-85 Identity = 151/262 (57.63%), Postives = 183/262 (69.85%), Query Frame = 1 Query: 238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGS----KNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYC----AEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCH 999 P + F +A P EV+ G+ PT IQA CWP+L+AGRD+IG+AETGSGKTL FSLPA+A+I +++ G + GP MLV+ PTRELA Q A VI AG G++SVCVYGGVPK +QK L +GG VVVATPGRL+DL+ E A DL +V LVLDEADRMLDLGFEQD+R II C A A GR+TAMFSATWP+ +R+LAAEFL PV+VT+G L AN RV Q VEV+ ERER +L +LL H Sbjct: 144 PHQTFGEAGFPPEVLG--GCEGFTAPTPIQAQCWPILSAGRDLIGVAETGSGKTLAFSLPALARIHRELGGGKALSRQRPGPLMLVICPTRELAQQCAAVIETAGAGAGLRSVCVYGGVPKHEQKRKLQNAQGG--AHVVVATPGRLRDLMSENAVDLGRVAHLVLDEADRMLDLGFEQDMRAIIGACPAPGAAAGGRRTAMFSATWPREVRELAAEFLDRPVRVTIGGSKLAANARVSQCVEVMGERERGARLQQLLERYH 401
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: UPI000C784A6A (DEAD-box ATP-dependent RNA helicase 5-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C784A6A) HSP 1 Score: 276 bits (705), Expect = 2.550e-85 Identity = 147/261 (56.32%), Postives = 189/261 (72.41%), Query Frame = 1 Query: 229 KVTPLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTG-SKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 K P+ F + +MK + + PT IQA CWPVL +GRD+IGIAETGSGKTL F++PA+A I ++M T K +GP ML++APTRELA+QS EV+ EA I+S+CVYGGVPK Q+ L G V+VVVATPGRL DL+ EG CDLS+V+ LVLDEADRMLD GFE+D+R II ++ RQTA+FSATWP S+R+LA EFL+NP+KVT+G+DDL A R++Q VEV+E+R R+ KL +LL HK+R Sbjct: 109 KFKPILTFPELGFSKSIMKICSK--FDRPTPIQAQCWPVLGSGRDIIGIAETGSGKTLAFTIPALAHIKERMSTEPGKKKGPMMLIIAPTRELAMQSQEVLEEASNIVKIRSICVYGGVPKHSQRHGLKSG-----VEVVVATPGRLIDLMEEGCCDLSEVSYLVLDEADRMLDQGFERDIRKIIEKTHKS--RQTALFSATWPDSVRELAHEFLKNPIKVTIGSDDLAAGSRIKQIVEVIEDRAREQKLDKLLKEYHKSR 360
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A5D6YE84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE84_9STRA) HSP 1 Score: 276 bits (707), Expect = 3.670e-85 Identity = 148/257 (57.59%), Postives = 185/257 (71.98%), Query Frame = 1 Query: 238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 P++ FAD + A+ +K G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P + I + K GP MLV+APTRELA+QS+EVI +AG CG++S C+YGGVPK +QK L G V VVVATPGRLKDL+ E ACDLSKVT +VLDEADRMLD GFE+D+R II A RQ AMFSATWP+SI+ LA EFL +PVKVT+G+DDL A+ V Q VEVV++R RD ++ LL H +R Sbjct: 156 PIRSFADVTFDAKFLK--TTAGFSKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPALSPKFSGPRMLVVAPTRELAMQSSEVITQAGKQCGLRSTCIYGGVPKHEQKKILRNG-----VHVVVATPGRLKDLLEERACDLSKVTFVVLDEADRMLDEGFEKDIRRIIG--ATHPERQIAMFSATWPQSIQKLAHEFLVDPVKVTIGSDDLAASQNVTQLVEVVDDRGRDARVHTLLQKYHSSR 403
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: D0MT79_PHYIT (DEAD/DEAH box RNA helicase, putative n=19 Tax=Phytophthora TaxID=4783 RepID=D0MT79_PHYIT) HSP 1 Score: 275 bits (703), Expect = 1.210e-84 Identity = 147/257 (57.20%), Postives = 187/257 (72.76%), Query Frame = 1 Query: 238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 P+ F D + ++ MK +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P + I + + K+ GP MLV+APTRELA+QS+ VI+EAG CG+KS+C+YGGVPK QK AL G V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R II + RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A++ V Q VEVVE+R RD + LL H +R Sbjct: 148 PVLSFDDVTFESKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPEVSHKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLNDPVKVTIGSDELAASHNVTQIVEVVEDRARDSRAHALLQKYHASR 395
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: A0A484DY05_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY05_BRELC) HSP 1 Score: 275 bits (702), Expect = 1.300e-84 Identity = 146/257 (56.81%), Postives = 185/257 (71.98%), Query Frame = 1 Query: 238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 P+ F D S + MK +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL F++P + I + K+ GP MLV+APTRELA+QS+ VI+EAG CG+KS+C+YGGVPK QK AL G V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R IIS+ RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A+ V Q VEV+++R RD + LL H +R Sbjct: 137 PVLSFKDISFEPKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFAIPGLIHIAAQSGVSPKHPGPLMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEEHSCNLSKVTFMVLDEADRMLDEGFEKDIRGIISHTHPE--RQIAMFSATWPQSIQKLAYEFLNDPVKVTIGSDELAASQNVTQIVEVIDDRARDARAHALLQKYHSSR 384
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: M4BN34_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN34_HYAAE) HSP 1 Score: 272 bits (695), Expect = 1.580e-83 Identity = 146/257 (56.81%), Postives = 185/257 (71.98%), Query Frame = 1 Query: 238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 P+ F D + ++ M +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL F+LP + I + SK GP MLV+APTRELA+QS+ VI+EAG CG+KSVC+YGGVPK QK AL G V VVVATPGRLKDLV E C+LSKVT +VLDEADRMLD GFE+D+R II + RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A++ V Q VEV+++R RD ++ LL H +R Sbjct: 140 PVLSFQDVTFDSKFMN--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFALPGLIHIAAQPAVSSKFPGPRMLVVAPTRELAMQSSAVISEAGRKCGLKSVCIYGGVPKHTQKKALRDG-----VHVVVATPGRLKDLVEERCCNLSKVTFVVLDEADRMLDEGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLTDPVKVTIGSDELAASHNVTQLVEVIDDRARDARVHALLQKYHSSR 387
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Match: G4ZE15_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZE15_PHYSP) HSP 1 Score: 272 bits (695), Expect = 1.890e-83 Identity = 146/257 (56.81%), Postives = 186/257 (72.37%), Query Frame = 1 Query: 238 PLKDFADASMPAEVMKYVNLRGWKEPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMAKIFKKMKTGSKNEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPGRLKDLVGEGACDLSKVTSLVLDEADRMLDLGFEQDVRDIISYCAEASGRQTAMFSATWPKSIRDLAAEFLRNPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKTR 1008 P+ F D + A+ MK +G+ +PT IQ+ CWP+L +GRD+IGIAETGSGKTL FS+P + I + K+ GP MLV+APTRELA+QS+ VI+EAG CG+KS+C+YGGVPK+ QK AL G V VVVATPGRLKDLV E +C+LSKVT +VLDEADRMLD GFE+D+R II + RQ AMFSATWP+SI+ LA EFL +PVKVT+G+D+L A+ V Q VEV+++R RD + LL H +R Sbjct: 148 PVLSFDDVTFEAKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPAVSPKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKQAQKKALRDG-----VHVVVATPGRLKDLVEERSCNLSKVTFVVLDEADRMLDDGFEKDIRAIIG--STHPERQIAMFSATWPQSIQKLAHEFLNDPVKVTIGSDELAASGNVTQIVEVIDDRARDARAHALLQKYHSSR 395 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10943.871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10943.871.1 >prot_H-canaliculatus_F_contig10943.871.1 ID=prot_H-canaliculatus_F_contig10943.871.1|Name=mRNA_H-canaliculatus_F_contig10943.871.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=336bp AKKSKKSKETEAATAEPDESAGGKKKKKKKKNKDKSSSSASSSGDGGDAVback to top mRNA from alignment at H-canaliculatus_F_contig10943:643..4274+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10943.871.1 ID=mRNA_H-canaliculatus_F_contig10943.871.1|Name=mRNA_H-canaliculatus_F_contig10943.871.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3632bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10943:643..4274+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10943:643..4274+ >mRNA_H-canaliculatus_F_contig10943.871.1 ID=mRNA_H-canaliculatus_F_contig10943.871.1|Name=mRNA_H-canaliculatus_F_contig10943.871.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2016bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10943:643..4274+ (Hapterophycus canaliculatus Oshoro5f female)back to top |