mRNA_H-canaliculatus_F_contig10907.846.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10907.846.1
Unique NamemRNA_H-canaliculatus_F_contig10907.846.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A6H5KUD2_9PHAE (Aconitate hydratase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUD2_9PHAE)

HSP 1 Score: 770 bits (1989), Expect = 2.350e-273
Identity = 380/392 (96.94%), Postives = 385/392 (98.21%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEKQGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGA SDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATER+GIASAANSFKE+LRADEGAPYDE+IEIDLD LRPHVNGPFTPDLAHPVG EFSAAVK+NDWPDDLSA LIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEKQGEKNTIITSYNRNFAKRNDGNPQ   +V
Sbjct:   96 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADSDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERSGIASAANSFKEHLRADEGAPYDEVIEIDLDTLRPHVNGPFTPDLAHPVGAEFSAAVKENDWPDDLSAALIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEKQGEKNTIITSYNRNFAKRNDGNPQTHAFV 487          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A836CC46_9STRA (Aconitate hydratase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC46_9STRA)

HSP 1 Score: 671 bits (1731), Expect = 4.040e-234
Identity = 324/392 (82.65%), Postives = 355/392 (90.56%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEKQGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLP+TA PTTIHCDHLIAAE GA +D+ AA  TNKEVYDFL+SAGAKYG+GFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTG+LSGWTSPKD+ILKVAGILTVKGGTGAIVEYFGPG+DSISCTGM TI NMGAEIGATC+TFP+N+RM  YL AT R G+A+AA  F  NLRADEGAPYDE++EI+L +L+PH+NGPFTPDLAH  G E +AAV+ N WP ++SAGLIGSCTNSSYEDMARCADL +QA+ AGL+FK +MLVTPGSE VRATI RDGFT  F +AGATVLANACGPCIGQWNR+EKQGE NTI+TSYNRNFAKRNDGNPQ   +V
Sbjct:  105 QDATAQMAVLQFISSGLPQTAVPTTIHCDHLIAAEKGADADLKAATTTNKEVYDFLSSAGAKYGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGELSGWTSPKDVILKVAGILTVKGGTGAIVEYFGPGLDSISCTGMATIANMGAEIGATCTTFPFNARMATYLAATTRGGLAAAAEGFAANLRADEGAPYDELVEINLSELKPHLNGPFTPDLAHTAGAEMAAAVEKNGWPREVSAGLIGSCTNSSYEDMARCADLVQQAEMAGLRFKSEMLVTPGSEQVRATIERDGFTEIFTKAGATVLANACGPCIGQWNRAEKQGEANTIVTSYNRNFAKRNDGNPQTHAFV 496          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A7S3YLR6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLR6_HETAK)

HSP 1 Score: 649 bits (1673), Expect = 7.070e-227
Identity = 316/392 (80.61%), Postives = 348/392 (88.78%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEKQGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTA P+TIHCDHLIAAE+G+ +D+AAAK TN EVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAGM WELKCPKVIGV LTG+LSGWTSPKD+ILKVA ILTVKGGTGAIVEY+G GVDSISCTGMGTICNMGAEIGATCSTFPY + M  YL AT RAG+ASAA+SF+E+LRAD GAPYD++IEI+L  L+P +NGPFTPDLA+  G +  A  + N+WP ++SAGLIGSCTNSSYEDM RCADL EQA KAGLK KV  L+TPGSE VRATI RDG T+ FEEAG TVLANACGPCIGQWNR E+QGE+N+I+TSYNRNFAKR DGNP    +V
Sbjct:    2 QDATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAENGSNADLAAAKSTNAEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAGMAWELKCPKVIGVHLTGRLSGWTSPKDVILKVADILTVKGGTGAIVEYYGEGVDSISCTGMGTICNMGAEIGATCSTFPYTASMDAYLRATNRAGLASAADSFREHLRADAGAPYDQVIEINLSDLKPMLNGPFTPDLANIAGADIRANCEANNWPKEMSAGLIGSCTNSSYEDMTRCADLVEQALKAGLKSKVPFLITPGSEQVRATIERDGLTAKFEEAGGTVLANACGPCIGQWNRHERQGERNSILTSYNRNFAKRQDGNPDTHAFV 393          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A7S2V7X3_9STRA (Aconitate hydratase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7X3_9STRA)

HSP 1 Score: 650 bits (1678), Expect = 3.740e-226
Identity = 314/392 (80.10%), Postives = 347/392 (88.52%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEKQGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTA P+TIHCDHLIAAE G++ D+ AAKVTNKEVYDFLASAGAKYGIGFW+PGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAGM WELKCPKVIGV LTGKLS WTSPKD+ILKVA ILTVKGGTGAIVEYFG GV+S+SCTGMGTICNMGAEIGATCSTFPY  +M DYL+AT+R  +A+AA+ FK+NL+ADEGA YD++IE++LD L+P +NGPFTPD AH  G   SA+VK+N WP+++SAGLIGSCTNSSYEDM RCADL  QA  AGL  K   L+TPGSE VRATIARDG   TFE+AG TVLANACGPCIGQWNR EKQGE N+I+TSYNRNFAKRNDGNPQ   +V
Sbjct:  102 QDATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAEKGSSDDLHAAKVTNKEVYDFLASAGAKYGIGFWQPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAGMAWELKCPKVIGVNLTGKLSPWTSPKDVILKVADILTVKGGTGAIVEYFGEGVESLSCTGMGTICNMGAEIGATCSTFPYTQKMADYLKATKREKLAAAADGFKDNLKADEGAQYDQVIEVNLDSLKPMLNGPFTPDWAHEAGAGISASVKENSWPEEMSAGLIGSCTNSSYEDMTRCADLVAQAMAAGLTCKAPFLITPGSEQVRATIARDGLVETFEKAGGTVLANACGPCIGQWNRHEKQGEANSILTSYNRNFAKRNDGNPQTHAFV 493          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A662Y503_9STRA (Aconitase domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y503_9STRA)

HSP 1 Score: 634 bits (1636), Expect = 1.830e-224
Identity = 312/393 (79.39%), Postives = 340/393 (86.51%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEK-QGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTA PTTIHCDHLI AE G+  D+  A + N+EVYDFL+SAGAK+G+GFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGM WELK PKVIGV LTGKLSGWTSPKD+ILKVA ILTVKGGTGAIVEYFGPGV+SISCTGMGTICNMGAEIGATCSTFPY  RM DYL++T+R+GIASAA+SF  NLRADEGA YD+IIE++LD L+P +NGPFTPDL H  G +  AA + N WP +LSAGLIGSCTNSSYEDM RCADL +QA  AGLKFKV   VTPGSE VRATIARDG   TF EAG TVLANACGPCIGQWNR++   G+KN+I TSYNRNFAKR DGNP    +V
Sbjct:   80 QDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSNIDLNNANIVNREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMAWELKAPKVIGVNLTGKLSGWTSPKDVILKVADILTVKGGTGAIVEYFGPGVESISCTGMGTICNMGAEIGATCSTFPYTDRMSDYLKSTKRSGIASAADSFSSNLRADEGAHYDQIIELNLDTLKPMLNGPFTPDLGHVAGADMKAASEKNGWPTELSAGLIGSCTNSSYEDMTRCADLIKQASSAGLKFKVPYYVTPGSEQVRATIARDGILDTFTEAGGTVLANACGPCIGQWNRTDMPMGQKNSIFTSYNRNFAKRADGNPATHSFV 472          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A7S0P924_CAFRO (Aconitate hydratase, mitochondrial n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P924_CAFRO)

HSP 1 Score: 645 bits (1663), Expect = 6.970e-224
Identity = 322/393 (81.93%), Postives = 342/393 (87.02%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEKQ-GEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPK A P+TIHCDHLIAAE+GA +DM AAK  N+EVYDFLA+AGAK+GIGFW+PGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAG+ WELKCPKVIGV LTG LSGWTSPKDIILKVA ILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYN RM DYL AT R GIA AA+ F++NLRADEGA YD IIEIDLD L PHVNGPFTPDLAHPV      AV  N WP ++SAGLIGSCTNSSYED++RCADLT QA  AGLKFK   +VTPGSE VRATI RDG   TF EAGATVLANACGPCIGQWNR +K  GE NTI+TSYNRNFAKRNDGNP    +V
Sbjct:  102 QDATAQMAVLQFISSGLPKVAAPSTIHCDHLIAAENGADADMKAAKDLNREVYDFLATAGAKFGIGFWRPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAGLAWELKCPKVIGVHLTGSLSGWTSPKDIILKVADILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNERMGDYLRATGREGIAKAADGFRDNLRADEGAEYDRIIEIDLDTLVPHVNGPFTPDLAHPVDQLGERAVA-NGWPVEVSAGLIGSCTNSSYEDLSRCADLTRQALAAGLKFKTPFMVTPGSEQVRATITRDGLAKTFSEAGATVLANACGPCIGQWNRHDKDMGEANTIVTSYNRNFAKRNDGNPATHCFV 493          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: M4B1W8_HYAAE (Aconitate hydratase, mitochondrial n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4B1W8_HYAAE)

HSP 1 Score: 640 bits (1651), Expect = 2.450e-222
Identity = 313/393 (79.64%), Postives = 345/393 (87.79%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSE-KQGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTA PTTIHCDHLI AE G+  D++ AK+ NKEVYDFL+SAGAK+G+GFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAGM WELK PKVIGV LTGKLSGWTSPKD+ILKVA +LTVKGGTGAIVEYFGPGV+SISCTGMGTICNMGAEIGATCSTFPY  RM DYL +T+R+GIASAA SF+ NLRADEGA YD+I+EI+LD+L+P +NGPFTPDL H  G +   A + N WP +LSAGLIGSCTNSSYEDM RCADLT+QAK+AGLKFK+   VTPGSE VRATIARDG   TF E+GATVLANACGPCIGQWNR++   GEKN+I TSYNRNFAKR DGNP    +V
Sbjct:   82 QDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSDKDLSNAKIINKEVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAGMAWELKAPKVIGVNLTGKLSGWTSPKDVILKVAHMLTVKGGTGAIVEYFGPGVESISCTGMGTICNMGAEIGATCSTFPYTERMGDYLRSTKRSGIASAAESFQANLRADEGAHYDQILEINLDELKPMLNGPFTPDLGHVAGADMKVASEKNGWPTELSAGLIGSCTNSSYEDMTRCADLTKQAKEAGLKFKIPYYVTPGSEQVRATIARDGILDTFLESGATVLANACGPCIGQWNRTDVAMGEKNSIFTSYNRNFAKRADGNPATHSFV 474          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: K3W6K0_GLOUD (Aconitate hydratase, mitochondrial n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6K0_GLOUD)

HSP 1 Score: 639 bits (1647), Expect = 2.170e-221
Identity = 316/393 (80.41%), Postives = 342/393 (87.02%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSE-KQGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTA PTTIHCDHLI AE G+ +D+  A + NKEVYDFL+SAGAK+G+GFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGM WELK PKVIGVKLTGKLSGWTSPKD+ILKVA ILTVKGGTGAIVEYFGPGV+SISCTGMGTICNMGAEIGATCSTFPY  RM DYL+AT R+GIASAA+SFK NLRADEGA YD+IIEI+LD+L+P VNGPFTPDLA+  G +  AA + N WP +LSAGLIGSCTNSSYEDM RCA+L  QA+KAGLKFKV   VTPGSE VRATI RDG   TF +AG T LANACGPCIGQWNR +   G KN+I TSYNRNFAKRNDGNP    +V
Sbjct:  104 QDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSTTDLNNANIVNKEVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMAWELKAPKVIGVKLTGKLSGWTSPKDVILKVADILTVKGGTGAIVEYFGPGVESISCTGMGTICNMGAEIGATCSTFPYTDRMADYLKATTRSGIASAADSFKANLRADEGAQYDQIIEINLDELKPLVNGPFTPDLANEAGEQLKAASEKNGWPTELSAGLIGSCTNSSYEDMTRCAELINQAEKAGLKFKVPYYVTPGSEQVRATIERDGVLDTFLKAGGTALANACGPCIGQWNREDLNMGVKNSIFTSYNRNFAKRNDGNPATHAFV 496          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A2D4BXR5_PYTIN (Aconitate hydratase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXR5_PYTIN)

HSP 1 Score: 636 bits (1640), Expect = 1.910e-220
Identity = 314/393 (79.90%), Postives = 339/393 (86.26%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSEK-QGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTA PTTIHCDHLI AE G+  D+  A   NKEVYDFL+SAGAK+G+GFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGM WELK PKVIGVKLTGKLSGWTSPKD+ILKVA ILTVKGGTGAIVEYFG GV+SISCTGMGTICNMGAEIGATCSTFPY  RM DYL AT+R+GIASAAN F+ NLRADEGA YD+IIEI+LD+L+P VNGPFTPDLAH  G +   A + N WP  LSAGLIGSCTNSSYED++RCA+L EQA  AGLKF+V   VTPGSE VRATI RDG   TF +AG TVLANACGPCIGQWNR++   GEKN+I TSYNRNFAKRNDGNP    +V
Sbjct:   98 QDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSNKDLNNANTVNKEVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMAWELKAPKVIGVKLTGKLSGWTSPKDVILKVADILTVKGGTGAIVEYFGEGVESISCTGMGTICNMGAEIGATCSTFPYTERMADYLHATQRSGIASAANDFRHNLRADEGAKYDQIIEINLDELKPLVNGPFTPDLAHEAGADLHQASEKNGWPTKLSAGLIGSCTNSSYEDLSRCAELVEQAASAGLKFQVPYFVTPGSEQVRATIERDGILDTFLQAGGTVLANACGPCIGQWNRTDMPMGEKNSIFTSYNRNFAKRNDGNPATHAFV 490          
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Match: A0A067CD01_SAPPC (Aconitate hydratase, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CD01_SAPPC)

HSP 1 Score: 630 bits (1626), Expect = 5.360e-219
Identity = 311/393 (79.13%), Postives = 340/393 (86.51%), Query Frame = 1
Query:    1 QDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGILTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQDYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFTPDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQAKKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIGQWNRSE-KQGEKNTIITSYNRNFAKRNDGNPQVCRYV 1176
            QDATAQMAVLQFISSGLPKTA P+TIHCDHLI AE G+  D+  A + NKEVYDFL+SAGAK+GIGFW+PGSGIIHQIVLENYAFPGGLMIGTDSHT NAGGLGMCAIGVGGADAVDVMAGMPWELK PKVIGV LTGKLSGWTSPKD+ILKVA ILTVKGGTGAIVEYFGPGV+SISCTGMGTICNMGAEIGATCSTFP+  RM DYL AT R GIASAA SF  NLRAD+GA YD+IIEI+LD L+P +NGPFTPD A+  G   +AA  +N WP +LSAGLIGSCTNSSYED++RCADLT+QAK AGLKFKV   VTPGSE VRATI RDG   TF+EAG TVLANACGPCIGQWNR++   G KN+I+TSYNRNFAKR DGNP+   +V
Sbjct:   52 QDATAQMAVLQFISSGLPKTAVPSTIHCDHLITAEKGSVEDLNTANIVNKEVYDFLSSAGAKFGIGFWQPGSGIIHQIVLENYAFPGGLMIGTDSHTVNAGGLGMCAIGVGGADAVDVMAGMPWELKAPKVIGVHLTGKLSGWTSPKDVILKVADILTVKGGTGAIVEYFGPGVESISCTGMGTICNMGAEIGATCSTFPFTERMADYLVATNRPGIASAARSFAANLRADDGAQYDQIIEINLDHLKPLLNGPFTPDRANVAGAPMAAASAENGWPTELSAGLIGSCTNSSYEDLSRCADLTQQAKAAGLKFKVPYFVTPGSEQVRATIQRDGILDTFKEAGGTVLANACGPCIGQWNRTDVPMGVKNSIVTSYNRNFAKRADGNPETHAFV 444          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10907.846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUD2_9PHAE2.350e-27396.94Aconitate hydratase, mitochondrial n=2 Tax=Ectocar... [more]
A0A836CC46_9STRA4.040e-23482.65Aconitate hydratase, mitochondrial n=1 Tax=Tribone... [more]
A0A7S3YLR6_HETAK7.070e-22780.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V7X3_9STRA3.740e-22680.10Aconitate hydratase, mitochondrial n=1 Tax=Fibroca... [more]
A0A662Y503_9STRA1.830e-22479.39Aconitase domain-containing protein (Fragment) n=2... [more]
A0A7S0P924_CAFRO6.970e-22481.93Aconitate hydratase, mitochondrial n=3 Tax=Cafeter... [more]
M4B1W8_HYAAE2.450e-22279.64Aconitate hydratase, mitochondrial n=22 Tax=Perono... [more]
K3W6K0_GLOUD2.170e-22180.41Aconitate hydratase, mitochondrial n=2 Tax=Pythiac... [more]
A0A2D4BXR5_PYTIN1.910e-22079.90Aconitate hydratase, mitochondrial n=1 Tax=Pythium... [more]
A0A067CD01_SAPPC5.360e-21979.13Aconitate hydratase, mitochondrial n=4 Tax=Saprole... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10907contigH-canaliculatus_F_contig10907:158..4481 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score753.8
Seed ortholog evalue4.6e-215
Seed eggNOG ortholog2880.D7FQN5
Preferred nameACO2
KEGG rclassRC00497,RC00498,RC00618
KEGG koko:K01681
KEGG ReactionR01324,R01325,R01900
KEGG Pathwayko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230
KEGG ModuleM00009,M00010,M00012,M00173,M00740
GOsGO:0000002,GO:0001889,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006102,GO:0006520,GO:0006536,GO:0006807,GO:0006950,GO:0006996,GO:0007005,GO:0007275,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009064,GO:0009295,GO:0009605,GO:0009607,GO:0009987,GO:0015980,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0031012,GO:0031347,GO:0031349,GO:0031974,GO:0032501,GO:0032502,GO:0035821,GO:0035900,GO:0042645,GO:0043167,GO:0043169,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043648,GO:0044003,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044416,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0048037,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052251,GO:0052255,GO:0052509,GO:0052510,GO:0055114,GO:0061008,GO:0062039,GO:0062040,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0072350,GO:0075136,GO:0080134,GO:0097159,GO:1901363,GO:1901564,GO:1901605
EggNOG free text desc.homoaconitate hydratase activity
EggNOG OGsCOG1048@1,KOG0453@2759
EC4.2.1.3
COG Functional cat.C
BiGG ReactioniMM904.YLR304C,iND750.YLR304C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons8
Model size1465
Cds size1368
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10907.846.1prot_H-canaliculatus_F_contig10907.846.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10907 176..4402 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928759.5391717-UTR-H-canaliculatus_F_contig10907:157..1751622928759.5391717-UTR-H-canaliculatus_F_contig10907:157..175Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10907 158..175 +
1696845553.3039567-UTR-H-canaliculatus_F_contig10907:157..1751696845553.3039567-UTR-H-canaliculatus_F_contig10907:157..175Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10907 158..175 +
1622928759.6669993-UTR-H-canaliculatus_F_contig10907:4402..44811622928759.6669993-UTR-H-canaliculatus_F_contig10907:4402..4481Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10907 4403..4481 +
1696845553.3925068-UTR-H-canaliculatus_F_contig10907:4402..44811696845553.3925068-UTR-H-canaliculatus_F_contig10907:4402..4481Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10907 4403..4481 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928759.5517325-CDS-H-canaliculatus_F_contig10907:175..3101622928759.5517325-CDS-H-canaliculatus_F_contig10907:175..310Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 176..310 +
1696845553.3196645-CDS-H-canaliculatus_F_contig10907:175..3101696845553.3196645-CDS-H-canaliculatus_F_contig10907:175..310Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 176..310 +
1622928759.5620651-CDS-H-canaliculatus_F_contig10907:489..5671622928759.5620651-CDS-H-canaliculatus_F_contig10907:489..567Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 490..567 +
1696845553.3299048-CDS-H-canaliculatus_F_contig10907:489..5671696845553.3299048-CDS-H-canaliculatus_F_contig10907:489..567Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 490..567 +
1622928759.5720587-CDS-H-canaliculatus_F_contig10907:1025..11841622928759.5720587-CDS-H-canaliculatus_F_contig10907:1025..1184Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 1026..1184 +
1696845553.3388658-CDS-H-canaliculatus_F_contig10907:1025..11841696845553.3388658-CDS-H-canaliculatus_F_contig10907:1025..1184Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 1026..1184 +
1622928759.5851405-CDS-H-canaliculatus_F_contig10907:1896..21361622928759.5851405-CDS-H-canaliculatus_F_contig10907:1896..2136Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 1897..2136 +
1696845553.3497326-CDS-H-canaliculatus_F_contig10907:1896..21361696845553.3497326-CDS-H-canaliculatus_F_contig10907:1896..2136Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 1897..2136 +
1622928759.6047392-CDS-H-canaliculatus_F_contig10907:2585..27711622928759.6047392-CDS-H-canaliculatus_F_contig10907:2585..2771Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 2586..2771 +
1696845553.3586066-CDS-H-canaliculatus_F_contig10907:2585..27711696845553.3586066-CDS-H-canaliculatus_F_contig10907:2585..2771Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 2586..2771 +
1622928759.6203394-CDS-H-canaliculatus_F_contig10907:3289..33661622928759.6203394-CDS-H-canaliculatus_F_contig10907:3289..3366Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 3290..3366 +
1696845553.366729-CDS-H-canaliculatus_F_contig10907:3289..33661696845553.366729-CDS-H-canaliculatus_F_contig10907:3289..3366Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 3290..3366 +
1622928759.633543-CDS-H-canaliculatus_F_contig10907:3644..37261622928759.633543-CDS-H-canaliculatus_F_contig10907:3644..3726Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 3645..3726 +
1696845553.3750548-CDS-H-canaliculatus_F_contig10907:3644..37261696845553.3750548-CDS-H-canaliculatus_F_contig10907:3644..3726Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 3645..3726 +
1622928759.6530406-CDS-H-canaliculatus_F_contig10907:3991..44021622928759.6530406-CDS-H-canaliculatus_F_contig10907:3991..4402Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 3992..4402 +
1696845553.3835485-CDS-H-canaliculatus_F_contig10907:3991..44021696845553.3835485-CDS-H-canaliculatus_F_contig10907:3991..4402Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10907 3992..4402 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10907.846.1

>prot_H-canaliculatus_F_contig10907.846.1 ID=prot_H-canaliculatus_F_contig10907.846.1|Name=mRNA_H-canaliculatus_F_contig10907.846.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=456bp
MAVLQFISSGLPKTACPTTIHCDHLIAAESGAASDMAAAKVTNKEVYDFL
ASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMC
AIGVGGADAVDVMAGMPWELKCPKVIGVKLTGKLSGWTSPKDIILKVAGI
LTVKGGTGAIVEYFGPGVDSISCTGMGTICNMGAEIGATCSTFPYNSRMQ
DYLEATERAGIASAANSFKENLRADEGAPYDEIIEIDLDQLRPHVNGPFT
PDLAHPVGTEFSAAVKDNDWPDDLSAGLIGSCTNSSYEDMARCADLTEQA
KKAGLKFKVDMLVTPGSELVRATIARDGFTSTFEEAGATVLANACGPCIG
QWNRSEKQGEKNTIITSYNRNFAKRNDGNPQVCRYVGLDCASLWQKLNST
RRGRAQLLAVGVFAAGAGVAGAGAAIAIPPVHPGPTPHLERRRSGETPTT
LILDR*
back to top

mRNA from alignment at H-canaliculatus_F_contig10907:158..4481+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10907.846.1 ID=mRNA_H-canaliculatus_F_contig10907.846.1|Name=mRNA_H-canaliculatus_F_contig10907.846.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4324bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10907:158..4481+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGACGCTACCGCCCAGATGGCGGTCCTTCAATTCATCTCGTCGGGCTT GCCGAAGACGGCGTGCCCCACCACAATCCACTGCGACCACCTCATCGCCG CCGAGAGCGGGGCTGCTTCCGACATGGCCGCCGCCAAGGTCACCAACAAG GAGGTAGGTGACGACGCCACACACCAAACGGAGCCCCACGTCTCCATTTC CGACGGCAGTTGTCGGAAAGAGCCGCGAATCTTGGGGCCCTTCTTCGACC GAATATTGGCGATTTTATCGTGGCGCTCACATCCCCATCCTATCCCGCTG TTTGTGTTTACGATTTGCACTGACTACAACAGGTGTACGACTTCCTGGCC TCCGCCGGTGCGAAGTACGGCATTGGTTTCTGGAAGCCTGGATCAGGCAT CATCCACCAGGTTGGTAAATTGATCGTCGCGGAGCTGTACGAGTGGGACA GTTTATTTCATTGCCGTTTGCCCGATGGGGGTATTGATATTACCAGTGCG AGTTTGGCCCTTATGGATTTCTCTGCCTTCTACTCACCGCAAACCCGGGC GTCTGCTTCAACGGGCCCGAGTTTATTCGTGTACTGAGCTTTGCCGCTCG AAGATCGTCTACGGGAAACGGGAAATACGTCGACGAGCGATCAAGCAGCG TACTGTTTGACTGCGGGGTAGCCGTCGCTGTCTAGCGCTTGCTTCTCTAC ACTGTGCGGCATAACCACGACGTCCCCTCGGCGTTCGCTCCCGGCGGATA TCTTGGGACGCCAAAACTCCCCCTCCCGCAGGCAAACAAGTCATGAGCAC CCCCCCCACCCCGCGGCGTCACACACGCGCTCAACACTCTGCTGCTGACT CACGCCACCGTTCCGCAGATCGTTCTTGAGAACTACGCTTTCCCCGGAGG GCTCATGATCGGAACGGACTCGCACACCCCCAACGCGGGCGGTCTCGGCA TGTGCGCCATCGGCGTGGGCGGAGCGGACGCGGTGGACGTGATGGCCGGC ATGCCGTGGGAGCTCAAGTGCCCCAAGGTGCGCGCGCGTTCCCTGCGTGC ATGCTTGCGCTCAGGGCATGGGCACCGGTGCTGTCTGTGCATGCGTGTCG TTTTGTGTTTAGCCTATATCGACAAACTTGGAGAAGTGCTCGGTTGCCGG GATCGGGCTGGTTGGTTCGGTTTCTGCGAACGTTCTGGATGGTCTCCAGC GTGAGCTTCTTTTTGCCCGTGCTGGCTGTAGACGTCCGTACAAAAATGTG CCAGTCAATCCAGGCCAGAGACGTAGACTTGTCGTGGCCGCTTTGCGTGT GCCGCCCCAGGTTTTCGGCTTTCGTCCGTCTCTCGATCTCACAGCGATGT ATGTAGTGCGGTGTGACGTCTCTGAGGCAAGGTAGAGAGAGGTGTTGAAC TGAGGCTCTCCTCGAGCGCGGTCGGCCGGTCCGGCGCCGCCGTCGTACGG GTTCACCAAAACGCCTGCGAACAAACAAGGAGCTCTTTTTTACACTTGGC CATTCTCAGGGGCGAGCGAAACGGGTGTCTTGAGGCACTCGACGTTAGAT GTGGGCAAGCGTGTATTTTTGGTTAATGACGAAATTGTGCCGGTGTGCTT GGCGTAGAGCCACACTTAAGCCGAGACGACCGTGTTTTTCACGTGCTTGG GGTGCGAAGTAAACGATCTCTGCTTGATCCGACCCGTCTGATCCGATCCA ATTCTCCGGCCGAACGAACCGACCAACCAACAAATTCAGGTGATCGGCGT CAAGCTGACGGGCAAGCTCTCGGGCTGGACCTCCCCCAAGGACATCATCC TCAAGGTGGCTGGTATCCTCACCGTTAAGGGGGGTACGGGCGCCATCGTT GAGTACTTCGGTCCCGGGGTGGACTCCATCTCGTGCACCGGCATGGGCAC TATCTGCAACATGGGGGCGGAGATCGGGGCGACGTGCTCGACGTTCCCGT ACAACTCTCGCATGCAGGACTACCTCGAGGTAAGATCGGTGCTCTCGGGG GTTGGGTTGAGATGGCGGTGAAACAGGAGGTGGCAATGGTTGGGTGACGG CGATGGTGACCTTAAGTTTTTCGGGTGCACTCCTGTGTCCTTTTCGTGAT GCCGTCGTTTTTTTTCGAGACATCCCTTCGAACATTCATGCAAACCCCTG CTTTAAAACGAGCGTATATCACGACAGCCACGACCGCATTGCCTGTAGCG CCCTCAGGCATCACCTCAGGAGCCCACTCGTCAGCAGGCGATGTGCGCTC CGTAGAGGCGCTCCGAACCGCCGCACGGTATACTCCGCATATTGAAGGCT GTCGCTGTGATCGACGCTCCCTGCCTTTTGCACGTAGCCTCGGCGCCATG AACAAGCTCCTCAGATGCTTCAATCCGTATCCTGAAGACGCGAAACCCTC AACACTTTTGCGCTCCACCGAACTACAGGCAACGGAGCGCGCGGGTATCG CTTCCGCGGCCAACTCTTTCAAGGAGAACCTCCGGGCAGACGAGGGGGCC CCGTACGACGAGATCATCGAGATCGACCTCGACCAGCTGCGCCCCCACGT CAACGGACCCTTTACGCCCGACCTCGCACACCCCGTCGGAACTGAGTTCT CGGCTGCCGTCAAGGTGAGGAGGCGTTCCTCGATATCTTCAGTCGTGCAT CTTCGCGGTGGAATGTGGGAGAGGAAGAGAGGTGGCGGCTGTCGTCATCG TCGCCGTCGTGTTGGTGCTCTGGGTCACTACTATGATGCGGAAATGTCGA AAGCGGTCGTGACGGAAGGAAAGGCTGGAACGGCCTCGAATCTGACTGCG GTGGTAGACTAATGCAGGCACGTTGATGTAGTCTAGCGTGTCCTGAAGTA GCTACGTGCTCGAGTTTTGCGTCGTGAGCGCCTGACTCCACGTCATTGCT GGCGTTGCCACGTGGTTTGCCAAGTGCGTTTTCCTGCCAAGACCGCTCGC TTTTAGACTGATGACGGTCGTTGTGCAACTAGGAAGTGTACAGCTTTTAT CCCTGCTGGCCTCACCTGAACCTCGCTATTTGAAACAAGTTCCGACCCCC CCCGATAGGTCCTCTGTGGTGGAGTGTGTTGTTCCCTGCTGAAACTTACA CATTTCGTGTGGTGAAACTGATGCTTGTCCAGGACAACGACTGGCCGGAC GACCTGTCCGCGGGTCTCATCGGCTCCTGCACCAACTCTTCCTACGAGGA CATGGCGAGGTGCGTCATCACTATCGTCTCTTTCGCTATAGGAGCACAGC AGCACCGTTTTCGCCATACCTTAGGATGTTATCGTCGTTTCTCGAGCGTT TTTCCATCTCAGGTCCAAGATCCAGGCTGGCACACGTTCAACTAGGTCCG GCTTTCGTAGGCAGCCCTGATGATTGTTGTTTGTTGGTGGCCGGCACGGT CCAGGCCACGCGAAACCCCCCCACCGCAAAAGCAATACGGAACTAAGCGC TTGGACAATGGACGTTGGTTTCCCACATGGTACGCAGGTGCGCCGACCTG ACGGAGCAGGCAAAGAAGGCTGGACTCAAGTTCAAGGTCGACATGCTTGT GACGCCCGGCTCTGAGCTGGTGAGAACACCAAGCAGTTGATCAAAACCAG AGGTGTTCACAACTCGGCTGGGCACGAAAGCAAGGAATTCCGCTTTCCTG GCGCGTCTTTTTGTGGTTGCCGCTGCTGCTGCTACTTTTTTTAGATGACG CAAGGTCGGCGACACGTGCGTCCCGACTAAGGTCTGCGGTAAACAAGGCG AGTATGCAATGCTACAAGTGTTCTCGTTGCCAATATCGTCTGCACCGTTC TTGTCTAAACCCACGCCCACATCGACATCGACAGGTACGAGCGACAATCG CCCGCGACGGGTTTACGTCGACGTTCGAGGAGGCCGGCGCCACCGTGCTG GCCAATGCGTGCGGCCCGTGCATCGGCCAGTGGAACCGCTCGGAGAAGCA AGGGGAAAAGAACACGATCATCACCTCCTACAACCGAAACTTCGCCAAGC GTAACGACGGCAACCCCCAGGTTTGTCGGTATGTGGGCTTGGATTGTGCT TCCCTTTGGCAGAAACTCAACAGTACCCGACGCGGCCGGGCGCAACTTCT TGCCGTTGGTGTCTTCGCTGCTGGTGCTGGTGTTGCTGGTGCTGGTGCTG CTATTGCTATTCCGCCTGTGCATCCTGGTCCGACACCACACCTCGAACGA CGGCGGTCAGGTGAAACGCCCACAACTCTCATCCTTGACCGATGAACAAG GGCGACCCCCCCCTGCTGCTTTCCGTTTCCCATCTCTGTCGCGGTGAACC CTTTCACAATCGACCAACTTTTTG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10907:158..4481+

>mRNA_H-canaliculatus_F_contig10907.846.1 ID=mRNA_H-canaliculatus_F_contig10907.846.1|Name=mRNA_H-canaliculatus_F_contig10907.846.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2736bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10907:158..4481+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGGTCCTTCAATTCATCTCGTCGGGCTTGCCGAAGACGGCGTGCCC
CACCACAATCCACTGCGACCACCTCATCGCCGCCGAGAGCGGGGCTGCTT
CCGACATGGCCGCCGCCAAGGTCACCAACAAGGAGATGGCGGTCCTTCAA
TTCATCTCGTCGGGCTTGCCGAAGACGGCGTGCCCCACCACAATCCACTG
CGACCACCTCATCGCCGCCGAGAGCGGGGCTGCTTCCGACATGGCCGCCG
CCAAGGTCACCAACAAGGAGGTGTACGACTTCCTGGCCTCCGCCGGTGCG
AAGTACGGCATTGGTTTCTGGAAGCCTGGATCAGGCATCATCCACCAGGT
GTACGACTTCCTGGCCTCCGCCGGTGCGAAGTACGGCATTGGTTTCTGGA
AGCCTGGATCAGGCATCATCCACCAGATCGTTCTTGAGAACTACGCTTTC
CCCGGAGGGCTCATGATCGGAACGGACTCGCACACCCCCAACGCGGGCGG
TCTCGGCATGTGCGCCATCGGCGTGGGCGGAGCGGACGCGGTGGACGTGA
TGGCCGGCATGCCGTGGGAGCTCAAGTGCCCCAAGATCGTTCTTGAGAAC
TACGCTTTCCCCGGAGGGCTCATGATCGGAACGGACTCGCACACCCCCAA
CGCGGGCGGTCTCGGCATGTGCGCCATCGGCGTGGGCGGAGCGGACGCGG
TGGACGTGATGGCCGGCATGCCGTGGGAGCTCAAGTGCCCCAAGGTGATC
GGCGTCAAGCTGACGGGCAAGCTCTCGGGCTGGACCTCCCCCAAGGACAT
CATCCTCAAGGTGGCTGGTATCCTCACCGTTAAGGGGGGTACGGGCGCCA
TCGTTGAGTACTTCGGTCCCGGGGTGGACTCCATCTCGTGCACCGGCATG
GGCACTATCTGCAACATGGGGGCGGAGATCGGGGCGACGTGCTCGACGTT
CCCGTACAACTCTCGCATGCAGGACTACCTCGAGGTGATCGGCGTCAAGC
TGACGGGCAAGCTCTCGGGCTGGACCTCCCCCAAGGACATCATCCTCAAG
GTGGCTGGTATCCTCACCGTTAAGGGGGGTACGGGCGCCATCGTTGAGTA
CTTCGGTCCCGGGGTGGACTCCATCTCGTGCACCGGCATGGGCACTATCT
GCAACATGGGGGCGGAGATCGGGGCGACGTGCTCGACGTTCCCGTACAAC
TCTCGCATGCAGGACTACCTCGAGGCAACGGAGCGCGCGGGTATCGCTTC
CGCGGCCAACTCTTTCAAGGAGAACCTCCGGGCAGACGAGGGGGCCCCGT
ACGACGAGATCATCGAGATCGACCTCGACCAGCTGCGCCCCCACGTCAAC
GGACCCTTTACGCCCGACCTCGCACACCCCGTCGGAACTGAGTTCTCGGC
TGCCGTCAAGGCAACGGAGCGCGCGGGTATCGCTTCCGCGGCCAACTCTT
TCAAGGAGAACCTCCGGGCAGACGAGGGGGCCCCGTACGACGAGATCATC
GAGATCGACCTCGACCAGCTGCGCCCCCACGTCAACGGACCCTTTACGCC
CGACCTCGCACACCCCGTCGGAACTGAGTTCTCGGCTGCCGTCAAGGACA
ACGACTGGCCGGACGACCTGTCCGCGGGTCTCATCGGCTCCTGCACCAAC
TCTTCCTACGAGGACATGGCGAGGACAACGACTGGCCGGACGACCTGTCC
GCGGGTCTCATCGGCTCCTGCACCAACTCTTCCTACGAGGACATGGCGAG
GTGCGCCGACCTGACGGAGCAGGCAAAGAAGGCTGGACTCAAGTTCAAGG
TCGACATGCTTGTGACGCCCGGCTCTGAGCTGGTGCGCCGACCTGACGGA
GCAGGCAAAGAAGGCTGGACTCAAGTTCAAGGTCGACATGCTTGTGACGC
CCGGCTCTGAGCTGGTACGAGCGACAATCGCCCGCGACGGGTTTACGTCG
ACGTTCGAGGAGGCCGGCGCCACCGTGCTGGCCAATGCGTGCGGCCCGTG
CATCGGCCAGTGGAACCGCTCGGAGAAGCAAGGGGAAAAGAACACGATCA
TCACCTCCTACAACCGAAACTTCGCCAAGCGTAACGACGGCAACCCCCAG
GTTTGTCGGTATGTGGGCTTGGATTGTGCTTCCCTTTGGCAGAAACTCAA
CAGTACCCGACGCGGCCGGGCGCAACTTCTTGCCGTTGGTGTCTTCGCTG
CTGGTGCTGGTGTTGCTGGTGCTGGTGCTGCTATTGCTATTCCGCCTGTG
CATCCTGGTCCGACACCACACCTCGAACGACGGCGGTCAGGTGAAACGCC
CACAACTCTCATCCTTGACCGATGAGTACGAGCGACAATCGCCCGCGACG
GGTTTACGTCGACGTTCGAGGAGGCCGGCGCCACCGTGCTGGCCAATGCG
TGCGGCCCGTGCATCGGCCAGTGGAACCGCTCGGAGAAGCAAGGGGAAAA
GAACACGATCATCACCTCCTACAACCGAAACTTCGCCAAGCGTAACGACG
GCAACCCCCAGGTTTGTCGGTATGTGGGCTTGGATTGTGCTTCCCTTTGG
CAGAAACTCAACAGTACCCGACGCGGCCGGGCGCAACTTCTTGCCGTTGG
TGTCTTCGCTGCTGGTGCTGGTGTTGCTGGTGCTGGTGCTGCTATTGCTA
TTCCGCCTGTGCATCCTGGTCCGACACCACACCTCGAACGACGGCGGTCA
GGTGAAACGCCCACAACTCTCATCCTTGACCGATGA
back to top