mRNA_H-canaliculatus_F_contig109.833.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: D7FV16_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV16_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 6.330e-134 Identity = 268/329 (81.46%), Postives = 283/329 (86.02%), Query Frame = 1 Query: 1 MTEFKRTATELDKLEELLGSLVGDTSTPAPEKLVIFSSAKVRLEDELSKKVSKFEKRLSEIDPVSGAPRYGESMTAKVIALGTKHQMLLQRLGQVEAGVAAAVTRHESREAISEEEAQKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLAAEQEEARLAEDKRRREREAQELTRSVAVGAAGVEDGLRRIDDACGGNPAEKKAAVQALRQARLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF 987 MTEFKRTA +L LEELLGSL D+STPAPEKL FS+AK RLEDELSKKVSKFE+RL+E DPVSGAPRYGESMTAKV+ALG KHQ LL+RL Q+EA + AAV++HESREA+S EEA+KRE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + REREAQEL SVAVGAAGVEDGLRRIDDACGG PAEKKAAVQAL+Q ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF Sbjct: 1 MTEFKRTAEDLASLEELLGSLGSDSSTPAPEKLATFSTAKGRLEDELSKKVSKFERRLNETDPVSGAPRYGESMTAKVVALGAKHQALLERLPQLEAEITAAVSQHESREAVSAEEARKREVERQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTREREAQELASSVAVGAAGVEDGLRRIDDACGGKPAEKKAAVQALQQ-----ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF 324
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: A0A835YSV6_9STRA (PUB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV6_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.640e-52 Identity = 179/346 (51.73%), Postives = 221/346 (63.87%), Query Frame = 1 Query: 1 MTEFKRTATELDKLEELLGSLVGDTSTPAPEKLVIFSSAKVRLEDELSKKVSKFEKRLSEIDPVSGAPRYGESMTAKVIALGTKHQMLLQRLGQVEAGVAAAVTRHESREAISEEEAQKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLAAEQEEARLAEDKRR----------------REREAQELTRSVAVGAAGVEDGLRRIDDACGGN--PAEKKAAVQALRQARLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDER 984 MTEFKR E+D+L L +L D S AP+ + K +E EL K++KFEKRL+E DP+SG RYGE M AKV L ++ L L E +AAA+ H + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++LA E A + DK++ REREA + SV VGAAGVE GLR + DACGG A+ + AL Q IL+N+ S+PEDPRFRRI+ +NE F +GRFEG +Q+LLSSGF++ VEEG ++LVM EPDL+ DMDGWT WY + + ++RL E + R Sbjct: 1 MTEFKRVQAEVDELGARLAALEADCSDAAPDTAKVLQEIKATVEGELQGKMAKFEKRLTETDPISGQLRYGEGMRAKVAQLQQQYDALAAELRLAEGKLAAALAAHAN-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLARE---AAVLRDKKKADXXXXXXXXXXARLAREREAAAIMASVPVGAAGVEAGLRALRDACGGGGGSAQMRKTCGALLQ-----ILQNMRSSPEDPRFRRIRCENERFAADVGRFEGAVQVLLSSGFKVVVEEGASLLVMAEPDLATDMDGWTTWYDTLKDTIDRLNDETNAR 325
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: A0A6U3X4B2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X4B2_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.760e-17 Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = 1 Query: 550 EDKRRREREAQELTR----SVAVGAAGVEDGLRRIDDAC-----GGNPAEKKAAVQALRQARLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMEL 975 E++RR E EA+E R SV G GV + I +AC G E A+ AL I + S PE+P+FRRI+RD+ F +GR GG +I ++SGFR+ EG + EP++ DMDGW++W+ + E ++ ++ E+ Sbjct: 72 ENERRAEEEAREADRAFVASVPRGGDGVRAQIGLIREACRSNTDGSGEKEWNTAIGALH-----TIFTQIMSRPEEPKFRRIRRDHPKFLEDVGRHPGGKEIFIASGFRLDNIEGVSCFFSKEPNIEHDMDGWSDWFNELKETLQIIEEEM 217
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: A0A7S1YSV5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YSV5_TRICV) HSP 1 Score: 87.4 bits (215), Expect = 1.300e-15 Identity = 40/127 (31.50%), Postives = 75/127 (59.06%), Query Frame = 1 Query: 595 SVAVGAAGVEDGLRRIDDACGGNPAEKKAAVQALRQARLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMEL 975 S+ GA GV + L + D +P+ + A+ +L I +A++PE+ ++RRI+RD+ F +GR GG ++L+++GF+++ +G + EPD+ DMDGW+ W+ I + +E ++ E+ Sbjct: 276 SIKKGADGVREQLAAMRDGTSSDPSGHRKALDSLHM-----IFNQIAAHPEEMKYRRIRRDHPKFMEDIGRHPGGKELLIAAGFKLETLDGVSCFFSKEPDIENDMDGWSAWFDAIKQTLEIIEEEM 397
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: G4ZJA0_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA0_PHYSP) HSP 1 Score: 81.6 bits (200), Expect = 2.680e-14 Identity = 94/285 (32.98%), Postives = 139/285 (48.77%), Query Frame = 1 Query: 151 VSKFEKRLSEIDPVSGAPRYGESMTAKVIALGTKHQMLLQRLGQVEAGVAAAVTRHESREAISEEEAQK-----REXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLAAEQEEARLAEDKRRREREAQELTRSVAVGAAGVEDGLRRIDDACGGNPAEKKAAVQALRQARLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELD 978 + KF R S +DPV+ PR+G +M AKV Q LL+R +V+ + E + +EAQ+ RE XXXXX XXXXXXXXXXXXX RQL E+ E +L S+ G G+E + + D+ G + Q+L++ L A++ N+ S+PE+ FR I ++N +F LG++ GG Q LL+ GF+ Q +E Q V V+ EPDLSED+D W+ W+ + E ++ +L+ Sbjct: 2 IEKFRARCSMVDPVTNQPRFGPNMLAKV-------QDLLRRYDEVKLAM-------EEEAPLRLQEAQRAAELAREQEQERHLQGARXXXXXQQREELQRIEALAAAAXXXXXXXXXXXXXEELLRQLEEEERE---------------KLNASIPHGKEGLERAIAMLKDSTGSEALYR----QSLQK--LLAVVSNICSSPENTAFRHIPKENAHFHADLGQYAGGHQCLLALGFKELQQGDEAQLRAVFVLEEPDLSEDLDAWSNWFDELKEMQSFVEYKLN 251
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: A0A6A3IUC9_9STRA (PUB domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IUC9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 5.990e-14 Identity = 115/344 (33.43%), Postives = 173/344 (50.29%), Query Frame = 1 Query: 1 MTEFKRTATELDKLEELLGSLVGDTSTPAPEKLVI----FSSAKVRLEDELSKKVSKFEKRLSEIDPVSGAPRYGESMTAKVIALGTKHQMLLQRLGQVEAG----------VAAAVTRHESREAISEEEAQKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLAAEQEEARLAEDKRRREREAQELTRSVAVGAAGVEDGLRRIDDACGGNPAEKKAAVQALRQARLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEG-----QTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMEL 975 M+EF++ ++ LE L + S P VI FS + E+ + KF R S +DPV+ PR+G M AKV Q LL+R +V+ V A + + + EA ++E R XXXXXXXXXXX XXXXXXXXXXXXXXX XXXX +E A ++ E + L S+ G G+E + + + + A + Q+L++ L A++ N+ S+PE+ FR I +DN +F LG++ GG Q LL+ GF+ ++++G + V V+ EPDLSED+D W+ W+ + E ++ +L Sbjct: 13 MSEFRQATAHVEALEARLALV--QQSVPDNTAHVILEENFSFILSAIGGEMDDMMEKFRARCSMVDPVTNQPRFGPKMLAKV-------QDLLRRYDEVKVAMEEDAPLGLQVEAKINQLTAEEAAKKQEQAARXXXXXXXXXXXXLAREQEQERLLLEAREXXXXXXXXXXXXXXXLAAXXXXXXXQRGKERAEXXXXRQLEGEERERLNASIPHGKEGLEKAIAMLRN----STASEALFRQSLQK--LLAVVSNICSSPENAAFRHIPKDNAHFHADLGQYAGGPQCLLALGFK-ELQQGDEAHPRAVFVLEEPDLSEDLDAWSNWFDELKEMQSLVESKL 340
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: A0A833S132_PHYIN (PUB domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S132_PHYIN) HSP 1 Score: 77.0 bits (188), Expect = 6.890e-14 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 706 RLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMEL 975 +L A++RN+ +PE+ FR I +DN +F LG++ GG Q LL+ GF+ Q +E Q V V+ EPDLSED+D W+ W+ + E ++ +L Sbjct: 22 KLLAVVRNICQSPENAAFRHIPKDNAHFHADLGQYPGGHQCLLAMGFKELQQGDETQPRNVFVLEEPDLSEDLDAWSSWFDELKELQSLVESKL 115
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: A0A8K1FKC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC0_PYTOL) HSP 1 Score: 80.1 bits (196), Expect = 2.590e-13 Identity = 42/128 (32.81%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 595 SVAVGAAGVEDGLRRIDDACGGNPAEKKAAVQALRQARLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR-MQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMEL 975 SV VG G++D + ++ G +P ++ +Q L ++ NV + PE +R I +DN +F + +G+++GG + LL+ GF+ ++ E + V +M EPDLSED+D W+ W+ + + E L+ L Sbjct: 210 SVQVGVEGLQDAISTLETNLG-DPKTFRSVLQKLH-----VLIGNVCAAPEKTEYRHIPKDNAHFHQDIGQYQGGHECLLTMGFKELEPEPTKRVFIMEEPDLSEDLDRWSAWFDGLKDMKELLEQRL 331
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: D0NMT9_PHYIT (PUB domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NMT9_PHYIT) HSP 1 Score: 77.4 bits (189), Expect = 8.460e-13 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 706 RLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMEL 975 +L A++RN+ +PE+ FR I RDN +F LG++ GG Q LL+ GF+ Q +E Q V V+ EPDLSED+D W+ W+ + E ++ ++ Sbjct: 157 KLLAVVRNICQSPENAAFRHIPRDNAHFHADLGQYPGGHQCLLAMGFKELQQGDETQPRNVFVLEEPDLSEDLDAWSSWFDELKELQSLVESKI 250
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Match: A0A2D4CIG2_PYTIN (PUB domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIG2_PYTIN) HSP 1 Score: 78.2 bits (191), Expect = 1.150e-12 Identity = 39/94 (41.49%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 706 RLAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR-MQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDER 984 RL I+ N+ ++PE+ FR I +DN +F +G+++GG LLS GFR M+ E G+ V VM EP+L ED+D W++W+ + ++ +K LDE+ Sbjct: 234 RLFVIVSNICASPENAAFRSIPKDNAHFHEDIGQYDGGHDALLSLGFREMEPEAGKRVFVMEEPNLEEDLDKWSDWF----DGLKVMKEFLDEK 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig109.833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig109.833.1 >prot_H-canaliculatus_F_contig109.833.1 ID=prot_H-canaliculatus_F_contig109.833.1|Name=mRNA_H-canaliculatus_F_contig109.833.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=330bp MTEFKRTATELDKLEELLGSLVGDTSTPAPEKLVIFSSAKVRLEDELSKKback to top mRNA from alignment at H-canaliculatus_F_contig109:4513..14749- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig109.833.1 ID=mRNA_H-canaliculatus_F_contig109.833.1|Name=mRNA_H-canaliculatus_F_contig109.833.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10237bp|location=Sequence derived from alignment at H-canaliculatus_F_contig109:4513..14749- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig109:4513..14749- >mRNA_H-canaliculatus_F_contig109.833.1 ID=mRNA_H-canaliculatus_F_contig109.833.1|Name=mRNA_H-canaliculatus_F_contig109.833.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1980bp|location=Sequence derived from alignment at H-canaliculatus_F_contig109:4513..14749- (Hapterophycus canaliculatus Oshoro5f female)back to top |