mRNA_H-canaliculatus_F_contig10750.714.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 193 bits (491), Expect = 1.210e-52 Identity = 119/251 (47.41%), Postives = 137/251 (54.58%), Query Frame = 1 Query: 31 KITGGTFSGNTADFGGFLYNRGVGVVSCXXXXXXXXXXXXXXGVYIVENATLVWACGLSDNTALTGPGIYARDGSTAVIRGVTLQDNVANTGPVVLIVSSSNLRTYQVVFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTLXXXXXXXXXXXXXXXXXXXXR-TPVIRNTALGNSNYFN-------DDGVPKGDSLINTDVTCDGWEGREEAASGGGANDSDSHASPWSSSRPHPPCSEG 759 IT GTF+ N ADFGGFLY G G SC VY VE A L W C L +N+AL GP IYARD + V+RGV L DNV G VV IVSS NL TYQ VF DT GS D+SAVQ D+ SSYKAEDTSFVGFAGEA+V+SEG L T V+RN LG++NYF+ +P SLI+ +VTCDGW P+SS+ PPCSEG Sbjct: 517 NITQGTFTNNEADFGGFLYKEGPGNASCTGASVVGHRGVDGGAVYAVEGAKLEWGCDLVNNSALAGPAIYARDNAEVVLRGVELYDNVVARGSVVFIVSS-NLTTYQTVFTDTEGSSDLSAVQADEDSSYKAEDTSFVGFAGEAVVFSEGILYLDDCDFSGSAASVLVYSERNSTTVVRNAVLGDNNYFDVAEAASEAGDIPTAHSLISVNVTCDGWM-------------------PFSST---PPCSEG 744
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 192 bits (489), Expect = 2.160e-52 Identity = 110/216 (50.93%), Postives = 128/216 (59.26%), Query Frame = 1 Query: 34 ITGGTFSGNTADFGGFLYNRGVGVVSCXXXXXXXXXXXXXXGVYIVENATLVWACGLSDNTALTGPGIYARDGSTAVIRGVTLQDNVANTGPVVLIVSSSNLRTYQVVFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTLXXXXXXXXXXXXXXXXXXXX-RTPVIRNTALGNSNYFN-------DDGVPKGDSLINTDVTCDGW 657 IT GTF+ N ADFGGFLY G G SC VY VE A L W C L +N+AL GP IYARD + V+RGV L DNV G VV +VSS NL TYQ VF DT+GS D+SAVQ D+ SSYKAEDTSFVGFAG A+V+SEGTL T V+RN LG++NYF+ + +P SLIN +VTCDGW Sbjct: 168 ITQGTFTNNEADFGGFLYKEGPGNASCTGASVAGHRGVDGGAVYAVEGAKLEWGCDLVNNSALAGPAIYARDNAEVVLRGVELCDNVVARGSVVFVVSS-NLTTYQTVFTDTAGSPDLSAVQADEDSSYKAEDTSFVGFAGRAVVFSEGTLYLDECNFSGSTASVLVYSEGDSTTVVRNAVLGDNNYFDVAKAASTANEIPTAHSLINVNVTCDGW 382
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 189 bits (480), Expect = 3.640e-51 Identity = 104/216 (48.15%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 31 KITGGTFSGNTADFGGFLYNRGVGVVSCXXXXXXXXXXXXXXGVYIVENATLVWACGLSDNTALTGPGIYARDGSTAVIRGVTLQDNVANTGPVVLIVSSSNLRTYQVVFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTLXXXXXXXXXXXXXXXXXXXXRTPVIRNTALGNSNYFN-------DDGVPKGDSLINTDVTCDGW 657 +IT GTF+ N ADFGGFLY G G C VY VE A L W C L +N+AL GP IYARD + V+RG L DNV G VV +VSS NL TYQ VF DT GS D+SAVQ D+ SSYKAEDTSFVGFAGEA+V+ EG L +RN LG++NYF+ + +P + L+N DVTCDGW Sbjct: 605 QITQGTFTNNEADFGGFLYKEGSGNAYCTGASVVGHRGVDGGAVYAVEGAKLEWGCHLVNNSALAGPAIYARDNAEVVLRGAELNDNVVARGSVVFVVSS-NLTTYQTVFTDTGGSADLSAVQADEDSSYKAEDTSFVGFAGEAVVFCEGILYLDDCDFSGSTASVLVQSEENFTTVRNAVLGDNNYFDVAKAASTANEIPTAEPLMNVDVTCDGW 819
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 134 bits (336), Expect = 6.420e-32 Identity = 95/218 (43.58%), Postives = 118/218 (54.13%), Query Frame = 1 Query: 22 ANTKITGGTFSGNTADFGGFLYNRGVGVVSCXXXXXXXXXXXXXXGVYIVENATLVWACGLSDNTALTGPGIYARDGSTAVIRGVTLQDNVANTGPVVLIVSSSNLRTYQVVFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTLXXXXXXXXXXXXXXXXXXXXR-TPVIRNTALGNSNYFN--DDG-----VPKGDSLINTDVTCD 651 A+ +ITGGTF N ADF +CXXXXXXXXX +Y V+ A L W C L +N+AL GP IYARD + + GV + DN G + +V+S+ L T QVV +DTS + D+SAVQ D+ S+Y AEDTSFVGFAGE +VY EG L VIRN LG Y N DD +P D IN ++TCD Sbjct: 609 ADIEITGGTFISNKADFXXXXXXXXXXNAACXXXXXXXXXGVDGGAIYAVDGANLEWECHLRENSALIGPAIYARDYAVVALSGVEVADNFVTRGSAIFVVNSA-LITSQVVVSDTSENPDLSAVQTDRLSTYIAEDTSFVGFAGEVVVYGEGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGVKTYENIADDASDMLQLPSADRFINLNLTCD 825
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 125 bits (315), Expect = 3.990e-29 Identity = 78/210 (37.14%), Postives = 103/210 (49.05%), Query Frame = 1 Query: 43 GTFSGNTADFGGFLYNRGVGVVSCXXXXXXXXXXXXXXGVYIVENATLVWACGLSDNTALTGPGIYARDGSTAVIRGVTLQDNVANTGPVVLIVSSSNLRTYQVVFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTLXXXXXXXXXXXXXXXXXXXXR-TPVIRNTALGNSNY--FNDDG-----VPKGDSLINTDVTC 648 G F N G G +C +Y ++ A L WAC + +N+AL GP IYARD + +RGV + DN G + +V+S+ + T QVV NDTS + D+SAVQ D S+Y A+DT FVGFAGE +VYSEG L VIRN LG +NY +D +P DS IN ++TC Sbjct: 395 GNFISNXXXXXXXXXXXGEGNATCSGATVLQHEGIDGGAIYAIDGANLEWACHIRENSALIGPAIYARDNAVVALRGVEVSDNFVTRGSAIFLVNSTFI-TSQVVVNDTSENSDLSAVQTDALSTYTAQDTCFVGFAGEVVVYSEGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGANNYETIAEDASEMLQLPSADSFINLNLTC 603
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 124 bits (310), Expect = 1.840e-28 Identity = 74/168 (44.05%), Postives = 93/168 (55.36%), Query Frame = 1 Query: 169 VENATLVWACGLSDNTALTGPGIYARDGSTAVIRGVTLQDNVANTGPVVLIVSSSNLRTYQVVFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTLXXXXXXXXXXXXXXXXXXXXR-TPVIRNTALGNSNY--FNDDG-----VPKGDSLINTDVTC 648 V+ A L W C L +N+AL GP IYARD + + GV + DN G + +V+S L TYQVV NDTS + D+SAVQ D+ S+Y AEDTSFVGFAGE +VYSEG L VIRN LG NY ++ +P DS IN ++TC Sbjct: 473 VDGANLEWECHLRENSALIGPAIYARDNAVVTLSGVEVSDNFVTRGSAIFVVNSE-LITYQVVVNDTSENPDLSAVQTDRLSTYTAEDTSFVGFAGEVVVYSEGGLYLDECDFSGSSSAVLVYAEKEDATVIRNAMLGEMNYKTIAEEASEMLQLPSADSFINLNLTC 639
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: D7G120_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G120_ECTSI) HSP 1 Score: 119 bits (297), Expect = 8.090e-27 Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 160 VYIVENATLVWACGLSDNTALTGPGIYARDGSTAVIRGVTLQDNVANTGPVVLIVSSSNLRTYQVVFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTL 486 +Y ++ A L W C L +N+AL GP IYARD + + GV + DN G + +V+S L TYQVV NDTS + D+SAVQ D+ S+Y AEDTSFVGFAGE +VYSEG L Sbjct: 446 IYAIDGANLEWECNLRENSALIGPAIYARDNAVVALSGVEVSDNFVTRGSAIFVVNSE-LITYQVVVNDTSENPDLSAVQTDRLSTYTAEDTSFVGFAGEVVVYSEGGL 553
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 4.910e-18 Identity = 61/143 (42.66%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 355 VFNDTSGSGDVSAVQVDQQSSYKAEDTSFVGFAGEAIVYSEGTLXXXXXXXXXXXXXXXXXXXXRTP-VIRNTALGNSNYFN-------DDGVPKGDSLINTDVTCDGWEGREEAASGGGANDSDSHASPWSSSRPHPPCSEG 759 VF DT GS D+SAVQ D+ SSYKAE+TSFVGFAG+A+V+SEGTL + V+RN LG+ NYF+ + +P SLIN +VTCDGW P+SS+ PPCSEG Sbjct: 8 VFTDTGGSSDLSAVQADEDSSYKAEETSFVGFAGDAVVFSEGTLYLDDCNFSGSSASVLVYSEGNSSTVVRNAVLGDYNYFDVAEAASTANVIPTAHSLINVNVTCDGWM-------------------PFSST---PPCSEG 128 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10750.714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10750.714.1 >prot_H-canaliculatus_F_contig10750.714.1 ID=prot_H-canaliculatus_F_contig10750.714.1|Name=mRNA_H-canaliculatus_F_contig10750.714.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=253bp FFSNPGNANTKITGGTFSGNTADFGGFLYNRGVGVVSCTGGSVEGNNAVDback to top mRNA from alignment at H-canaliculatus_F_contig10750:49..2784+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10750.714.1 ID=mRNA_H-canaliculatus_F_contig10750.714.1|Name=mRNA_H-canaliculatus_F_contig10750.714.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2736bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10750:49..2784+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10750:49..2784+ >mRNA_H-canaliculatus_F_contig10750.714.1 ID=mRNA_H-canaliculatus_F_contig10750.714.1|Name=mRNA_H-canaliculatus_F_contig10750.714.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1518bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10750:49..2784+ (Hapterophycus canaliculatus Oshoro5f female)back to top |