mRNA_H-canaliculatus_F_contig1075.711.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: D7FMA7_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA7_ECTSI) HSP 1 Score: 462 bits (1188), Expect = 2.450e-149 Identity = 230/280 (82.14%), Postives = 248/280 (88.57%), Query Frame = 1 Query: 463 DAAVLPLPELTTTVLPSNGQLMAIETEELVAASLKAMRTNLNQKPAWRLAPAATDDFLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKVEDARGGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKSLDRKLRVRAVWYILLAALEDVETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQALEGTVEPGNLPPPMGQKPLDFQGWLAERIKTEV 1302 +A + LPELTTTVLPSNGQL+AIETEELV SL AMR NL + PAW AP TDDFLLMFLRSEVF PHKAADRYRKFWKVK+ LCGEDKAA PIKVEDAR GLD EFCQIVPGSKDREGRQ VV+VNTGQA+K+LDRK+RVRAVWY+LLAALEDVETQR+GFCFVV+LKTARISQ+DQKFNKMVLDSIQG+LPVRVGSMNMCYPPSFF+ IWMVISTFLHERVR RFRFIYG DEDVL+AL GTV P NLPPP+G+KPLDFQGWLAER K EV Sbjct: 6 EAEEMVLPELTTTVLPSNGQLLAIETEELVMGSLAAMRANLKKVPAWSRAPPPTDDFLLMFLRSEVFKPHKAADRYRKFWKVKVGLCGEDKAAFPIKVEDARLGLDREFCQIVPGSKDREGRQ------VVLVNTGQADKTLDRKMRVRAVWYVLLAALEDVETQRKGFCFVVTLKTARISQVDQKFNKMVLDSIQGSLPVRVGSMNMCYPPSFFRWIWMVISTFLHERVRARFRFIYGEDEDVLEALTGTVAPENLPPPIGRKPLDFQGWLAERQKAEV 279
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: D7FMA8_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA8_ECTSI) HSP 1 Score: 298 bits (762), Expect = 6.160e-89 Identity = 143/243 (58.85%), Postives = 183/243 (75.31%), Query Frame = 1 Query: 571 MRTNLNQKPAWRLAPAATDDFLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKVEDARGGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKSLDRKLRVRAVWYILLAALEDVETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQALEGTVEPGNLPPPMGQKPLDFQGWLAERIKTE 1299 M+ +L PAW AP+ TD+FLLMFLR+EVF+P AA+RYRKFWK KI LCGE+KAALPIK EDAR L+ EF Q+VPG++D EGRQ VV++ + +K+L+R+LR+ +VWY+LLAALEDVETQRRGFCFV K + SQ D F KMV+ S+QG LPVR+GS+N+CYPP+FF+V+W +I+ FLHERV++R R I GTD +VL L V P LPPPMG KP +F WLAE+ + + Sbjct: 1 MKADLAANPAWSGAPSQTDEFLLMFLRAEVFSPSAAANRYRKFWKAKITLCGEEKAALPIKFEDARAALESEFVQLVPGTRDIEGRQ------VVMIVSSNMDKTLERRLRLLSVWYVLLAALEDVETQRRGFCFVGYQKAVKRSQADPTFVKMVMQSLQGALPVRIGSINICYPPTFFRVVWGIINPFLHERVKRRVRVIPGTDAEVLGVLGAIVPPDGLPPPMGPKPKEFSAWLAEQAQKD 237
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A7S3P5Y9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5Y9_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.130e-38 Identity = 95/276 (34.42%), Postives = 148/276 (53.62%), Query Frame = 1 Query: 517 GQLMAIETEELVAASLKAMRTNLNQKP---------AWRLAPAA-TDDFLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKVE----DARGGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKS-LDRKLRVRAVWYILLAALEDV-ETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQALEGT--VEPGNLPPPMG-QKPLDFQGWLAER 1287 GQL +ET+E++A LK L + P A PA T++F LMFLRSEVFN AA RY +W ++ +CG +KA LP+ ++ D L + F + G D GR ++ V G +K+ R+ RAVWY++ AALE++ E Q+ G F+ A+++Q D+ K+VL +IQGTLPVR+ + ++C PP+FFK+I + F+ ER ++R +G+ + + L T + N+P +G +D W+ R Sbjct: 16 GQLHPVETDEMIAQKLKQFEEELEKLPQDQKHGLQQAQEKCPAELTNEFKLMFLRSEVFNADLAAKRYAHYWDKRVEICGPEKAFLPLTLDGALRDDEVALKIGFVNYLAGCSDPHGRA------ILYVLPGNQDKTKYTRESMGRAVWYVIHAALEEMPEAQKHGIIFMAHPAGAKLAQFDRAMMKVVLSAIQGTLPVRLSAFHICQPPAFFKIILPIAKLFMSERTKKRLCIHFGSTAKICEKLTKTYGLTKANIPQTLGGDAKVDTPAWIETR 285
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A7S3L2B2_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2B2_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.800e-35 Identity = 88/274 (32.12%), Postives = 147/274 (53.65%), Query Frame = 1 Query: 517 GQLMAIETEELVAASLKAMRTNLNQKP---------AWRLAP-AATDDFLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKVE----DARGGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKS-LDRKLRVRAVWYILLAALEDVETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQALEGT-VEPGNLPPPMGQKPL-DFQGWLAER 1287 GQ +ET+E++ L+ + + P A P TD F L+FLRSEVFN AA RY K+W ++ + G +KA LP+ ++ D L + + + G D +GR ++ + G+ +K+ R+ VRA+WY+L AA+E+ ETQ+ G FV +SQ+D+ K++L SIQGT+PVR+ + + C PP+F K++ + F+ ER + R F +G+ E V + L+ + ++P +G + D + W+ +R Sbjct: 16 GQFHPVETKEMILEKLEDFEAEIKKLPEEDKKNLLEAEEKCPDLVTDSFKLIFLRSEVFNADLAAKRYAKYWDKRVEIFGPEKAFLPLTLDGALKDDDAALTIGYANFLHGHCDPQGRS------IMYMEAGRQDKTKYSRESMVRAIWYMLHAAMENEETQKYGMLFVTYPGGVTMSQIDRGLIKILLPSIQGTIPVRLSAFHSCQPPTFLKLVLPFVKLFMSERTKDRLLFHFGSTEKVCRKLQSYGLRKEDIPQTLGGNVVVDTKAWIEQR 283
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A7S2KWX8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWX8_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.150e-27 Identity = 90/282 (31.91%), Postives = 142/282 (50.35%), Query Frame = 1 Query: 517 GQLMAIETEELVAASLKAMRTNLNQ------KPAWRLA-----PAATDDFLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKVEDARG----GLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKSL-DRKLRVRAVWYILLAALEDVETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQALEGTVEPGN-LPPPMGQKPL----DFQGWLAERIKTE 1299 GQ IET E VA +L+ + +L Q + A+ LA + LMFLR E+FN AA R +W ++ L GE+KA +K+E A ++L +++P + D EGR + + N+ L R+ VR +WY ALE Q+RG V + A+ S D+ KM DS++ LP+R+GS +C+PP+FF +I+ ++ FL +R R G+DE VL+ L P + +P +G + + ++ WL ER ++E Sbjct: 12 GQRHPIETAEKVADALRRLDEHLLQFGTTEDRAAFDLACQQNSSVVSSSHKLMFLRCELFNVDLAAKRLCNYWTARLVLFGEEKAFQELKLETAMKDDMIAIELGIVKVLP-NPDEEGRT------ICFFDPSLQNRELYTRESLVRCLWYCFHVALERESAQQRGIILCVYPRNAKHSHFDRGLAKMFSDSMKRCLPIRIGSFQVCHPPTFFVIIFPILKLFLGAYLRNRICVNGGSDEKVLKKLNSCGIPSSSIPEELGGEVVVDNETWKAWLKERKQSE 286
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A6V2CPB1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CPB1_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.170e-24 Identity = 91/302 (30.13%), Postives = 148/302 (49.01%), Query Frame = 1 Query: 451 GSALDAAVLPLPELTTTVLPSN-GQLMAIETEELVAASLKAMRTNLNQ------KPAWRLAPAATDDFL------LMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPI-----KVEDARGGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKSLDRKLRVRAVWYILLAALEDVETQRRGFCFVVSL-KTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQALEGT-VEPGNLPPPMGQK-PLDFQGWLAERIK 1293 G D AV+ + + T P Q+ IET++L+ S+ + ++ K ++A +F+ LMFLRSE+F+ AA+RY K+W +I L GE+KA PI ++D L++ F +++ G D GR + +T + +S+ VRAVWYI+ AALE Q++G F+V + +S D+ MV +SI +P+R G++++ P F V+ +I L R+R + G+++ +L L V LP +G K D WLA+R K Sbjct: 56 GEGNDNAVVDIKTVLKTTKPDQYNQVHPIETKDLIDTSITQLDDVVSNVLDDGVKSGLKMAQQKCPEFVNSKEHKLMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLDSTKYSRESM-----VRAVWYIMHAALESETAQQKGLVFLVYIGNNPALSVFDRPLISMVAESISYLIPLRAGAIHLFPTPLVFSVLLNIIKYVLGSRLRNTLKVTGGSNDKILDTLNKLGVTTDVLPIEVGGKVDHDHDAWLAKRRK 352
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A7S2GSM7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GSM7_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.150e-22 Identity = 83/274 (30.29%), Postives = 139/274 (50.73%), Query Frame = 1 Query: 514 NGQLMAIETEELVAASLKAMRTNLNQ-----KPAWRLAPAATDD-----FLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKVEDAR----GGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKSLDRKLRVRAVWYILLAALEDVETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQAL-EGTVEPGNLPPPMGQKP-LDFQGWLAER 1287 +G+ ++ EE+V L M LN+ KPA +A D +FLR E F+ +AA R +W+ K+ G +K+ +P+ +++A L+ +++P + D GR + T + +S+ +RA+WY+LLAA+ED TQ RG FV+ LK + + Q D+K +L+ +P+R S ++C+P + F + ++ L +R+R R GT+E+VL L E + P +P MG K LD + WL+ R Sbjct: 40 HGKCAVLDDEEIVKRGLDEMEKELNEISCDEKPALLMAETRCPDQCSSEHKRLFLRREAFDAERAARRLVDYWQQKLKWFGPEKSFIPLALDNAMREDTAALNRGLLRLLPVT-DSFGRCILFCDISLHDATMYSMESM-----MRAIWYMLLAAIEDETTQNRGAIFVLYLKQSTLDQFDRKLLHRLLELEDKFVPIRFRSFHICHPGACFDIERPILQFLLGKRLRARMDVHQGTEEEVLIELDEYGMPPDRVPSIMGGKVVLDHERWLSNR 307
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A1E7FHR2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHR2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 5.050e-11 Identity = 56/199 (28.14%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 625 DDFLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKV----EDARGGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKSLDRKLRVRAVWYILLAALEDVETQRRGFCFV-VSLKTARISQLDQKFNKMVLDSIQGTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQAL 1206 + FL+MFLR+ FN AA R+ F++ K+ L G +K I+V ED L+ + Q++ +DR GR +++ + K+L R+R ++ +++ AL+DVETQ+RG + ++ + + +L S+ LP+R ++ CY + ++ V + R R RF GTD +V+ L Sbjct: 31 EKFLIMFLRAVEFNTKTAAIRFVAFFETKLELFGREKLGRDIRVDDLDEDDINCLESGYAQVL-NKRDRAGRAI-----FMLMPMIRRYKTLQN--RMRTIYMVIMFALKDVETQKRGIVAIPYNVGPSHTKDRQAVWKNALLVSV---LPIRFTGVHYCYDDEKLRAVFFVAMVVFEKAARIRSRFHLGTDMEVIYTL 218
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A7S4ADD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADD2_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.010e-10 Identity = 72/241 (29.88%), Postives = 116/241 (48.13%), Query Frame = 1 Query: 535 ETEELVAASLKAMRTNLNQKP-----AWRLAPAATDDFL------LMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKV----EDARGGLDLEFCQIVPGSKDREGRQARNSQNVVVVNTGQANKSLDRKLRVRAVWYILLAALEDVETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQ--GTLPVRVGSMNMCYPPSFFKVIWMVISTFLHERVRQRFRFIYGTDEDVLQAL 1206 ET VA S++ L P A+ LA D++ LMFLR+ F+ AA R+ F++ K+ L G++K I+V ED L+ + QI+ G +DR R +++ + K+L+ K+R A++ +L+ AL+DVETQ+RG + I Q K + V + Q LP+R +++ CY + I+ + L + R R RF GTD +V+ L Sbjct: 48 ETAASVARSIRLFEYELRSIPDKDKEAYLLALHQNADYVMNKKFQLMFLRALEFDVKAAAARFISFFQEKLKLFGKEKLGRDIRVDDLDEDDIACLESGYAQIL-GVRDRADRAI-----FMLMPMIRQFKTLENKMR--AIYMVLMFALKDVETQKRGIVAI----PYNIGQGRSKDRQAVFKNAQLLAALPLRFTAVHYCYDDEKLRHIFFLAMYALQKAARIRTRFHLGTDMEVIYTL 276
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Match: A0A7S4AG76_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AG76_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 8.170e-8 Identity = 64/251 (25.50%), Postives = 111/251 (44.22%), Query Frame = 1 Query: 631 FLLMFLRSEVFNPHKAADRYRKFWKVKIALCGEDKAALPIKVEDARGGLDLEFCQIVPGS------KDREGRQARNSQNVVVVNTGQANKSLDRKLRVRAVWYILLAALEDVETQRRGFCFVVSLKTARISQLDQKFNKMVLDSIQ------GTLPVRVGSMNMCYPPSFF--KVIWMVISTFLHERVRQRFRFIYGTDEDVLQALEGTVEPGNLPPPMGQKPLDFQGWLAERIKTEV*ISTFEVCKVGHL 1341 F L FLR E+F+ HKA+ R+ +F + L G PI ++D GG E ++ S +DR GR+ V + G L K + + +I L A +D+ETQ++G F+V + + + DS++ +LPVRV S++ C S F ++ + S + + ++ RF+ G ++ ++L G P N P + + + + +K V K G+L Sbjct: 196 FRLRFLRCELFDAHKASQRFVRFLEFCSDLFGSFVGERPILIDDLIGGGFKEKKALLHSSMQYFPCRDRSGRR-------VCADVGLRVTDLPSKQIYKIITWIHLVATQDIETQQKGVVFIVLPSSKGNDGIAKYVTSTEFDSMEYHKKSFESLPVRVASIHFCSKDSPFCEEMAYRYFSG-VPKDLKIRFKVHQGDHTEIEKSLSGFGIPINFLPLTSEGKIKKKVYHRNFVKFHVETEVLLAYKSGYL 438 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1075.711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1075.711.1 >prot_H-canaliculatus_F_contig1075.711.1 ID=prot_H-canaliculatus_F_contig1075.711.1|Name=mRNA_H-canaliculatus_F_contig1075.711.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=290bp MDPGSGSALDAAVLPLPELTTTVLPSNGQLMAIETEELVAASLKAMRTNLback to top mRNA from alignment at H-canaliculatus_F_contig1075:1416..12730- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1075.711.1 ID=mRNA_H-canaliculatus_F_contig1075.711.1|Name=mRNA_H-canaliculatus_F_contig1075.711.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=11315bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1075:1416..12730- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1075:1416..12730- >mRNA_H-canaliculatus_F_contig1075.711.1 ID=mRNA_H-canaliculatus_F_contig1075.711.1|Name=mRNA_H-canaliculatus_F_contig1075.711.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1740bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1075:1416..12730- (Hapterophycus canaliculatus Oshoro5f female)back to top |