mRNA_H-canaliculatus_F_contig1067.641.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1067.641.1
Unique NamemRNA_H-canaliculatus_F_contig1067.641.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: D8LQH2_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQH2_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 1.850e-160
Identity = 241/312 (77.24%), Postives = 271/312 (86.86%), Query Frame = 2 
Query:  308 RAWVLTRGGAGSAT-GEREPSSRWWRSRKRRAKRQA-EMAAREAAQDSLHRSVPLAKHVLLVQGVLRQLKRWLGFIVDITTLKRLRLLRRARQGSWQHGGPIPLRYRGLLQELRQEVAAKPGLERRAKMVHHELDTIALGRYLEAAFWSLERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMPRHSWQYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAKMHLIPST 1237
            R+  L RGG  S    E  P SRWWRSRKR AKR+A E+AA+EA +   H      KHV+L   +LR LKRW+G +VD TTLKRLRLLR+AR+GSWQHGGPIP+RYRG+LQELR EVAAKPGLERRAK VHHELDT+A GR+LEAAFW+LE DGKRVS FIEESIAWRE IGADRL+KEDVVDQG +G+IIVKGHDLSRRPVVYFR A+DGRMEG+GN +LMIY+LERAIRLMPR+SWQYTIV+DC+GMGLKQ+PPV ++K+MFKLLSHHYPMRLGHVLFTNV PSVMLCWKVVSPLLQARTKAKMHLIPST
Sbjct:   72 RSLFLIRGGTSSELFDESNPQSRWWRSRKRWAKRKAAELAAKEAKESRTHAH---PKHVIL--NLLRLLKRWIGVVVDFTTLKRLRLLRQARRGSWQHGGPIPVRYRGVLQELRNEVAAKPGLERRAKKVHHELDTVAFGRFLEAAFWALEHDGKRVSDFIEESIAWREKIGADRLRKEDVVDQGCRGAIIVKGHDLSRRPVVYFRPALDGRMEGDGNSKLMIYNLERAIRLMPRNSWQYTIVIDCEGMGLKQLPPVTYMKKMFKLLSHHYPMRLGHVLFTNVGPSVMLCWKVVSPLLQARTKAKMHLIPST 378
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: A0A835ZL56_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL56_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.380e-36
Identity = 81/185 (43.78%), Postives = 108/185 (58.38%), Query Frame = 2 
Query:  716 LGRYLEAAFWSLERDGKRVSTFIEESIAWREMIGAD---------RLKKEDVVDQG----EKGSIIVKGHDLSRRPVVYFRLAVDGRMEGNGN-----LRLMIYSLERAIRLMPRHSWQYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAK 1216
            L R++E AFW+LE  G  VS  IEE++AWRE +GA          R +  D+V         G+I+V G D   RP+++ RL   G + G G      LR  +Y++ERA R   R    YTIV DC+G GL  +PP+  ++ MF +LS HYPMRLGH+L  N S SV LCW+V SP++  RTK K
Sbjct:    2 LVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRL---GALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDK 183
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: A0A835Z968_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z968_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.590e-30
Identity = 83/279 (29.75%), Postives = 137/279 (49.10%), Query Frame = 2 
Query:  530 VDITTLKRLRLLRRARQGSWQHGGPIPLRYRGL-------LQELRQEVAAKPGLERRAKMVHHELDTIALGRYLEAAFWSLERDGK---RVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVD-GRMEGNGNLRLMIYSLERAIRLMPRHSWQYTIVMDCQGMGLKQMPPVAHVKR-----------------------------------MFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAKMHLI 1228
            ++ + +KR +LL R+ +     GG +   Y  +       L++L++EV A+P L R A+ V HEL  + L R+LE ++W +E+DG    R+   I  ++ WR+ +GA  +    V      G + V+G D   RPV++FR A +    +   N RL++Y+LERA+R MP    ++ +V+DC G  L   PPVA++K                                       ++ +HYPMRLG+V   N    +   WK+++ +LQ RT  K+  +
Sbjct:   59 LNFSAMKR-KLLGRSAKAPGADGGVLLYGYYQMNDQKWAALRQLKEEVDARPELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFL 336
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: D7FQ39_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ39_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 7.230e-28
Identity = 54/165 (32.73%), Postives = 93/165 (56.36%), Query Frame = 2 
Query:  722 RYLEAAFWSLERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMPRHSWQYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAK 1216
            RYLE A+W++E  G+ +   +  ++ WRE      L    V ++ + G + V+G D  +RP++++R  ++   +    L L+ ++LERA   +P+   Q+ +V DC G G  + PP+  +K  F  +  HYPMRLG+V+  N    +   WK++S +L+ RTK K
Sbjct:    3 RYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLLTDNQVAEEAKYGKMYVRGLDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEK 167
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BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: A0A4D9CSV1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSV1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.780e-24
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 2 
Query:  662 PGLERRAKMVHHELDTIALGRYLEAAFWSLERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMPRHSWQ-YTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAKMHLIPS 1234
            PG+  R   V   +D   + RY  A  W     GK     +  +I WRE      L  +DV+ Q   G + V G D   RP++YF  A          ++ ++Y+LERA+ L  +   + Y+ ++DC G  L  MPP+  +K+ F LL HHYP R+G ++F +   +    WK+++PL+   T+ K+  +P+
Sbjct:    2 PGIPERGLAVRMAVDRECVARYFVAGQWKPSLRGKTTVDHVLRTIQWRERERVAHLGPDDVLAQARDGYLYVNGTDRVGRPLIYFSPAFQPNRRPEKAIQYLVYTLERALDLSRQDGVEAYSFIIDCSGFSLSNMPPINIIKQTFTLLHHHYPTRVGFIMFLHTGSAFQFLWKMLTPLVSPMTRNKILFVPT 193
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: A0A7S2XX21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX21_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.740e-20
Identity = 48/124 (38.71%), Postives = 74/124 (59.68%), Query Frame = 2 
Query:  863 GSIIVKGHDLSRRPVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMP--RHSWQYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAKMHLI 1228
            G +   G   S  P+VYFR A++   +   +L L++Y+LERAI+ M   R   ++ +++DC G GL + PP++ V   FK L H+YPMRLG V   N    + + WK+VSP+L  RT+ K+  +
Sbjct:   21 GKMYTLGRGRSGEPLVYFRPALETGSDYEASLHLLVYTLERAIKSMDSKRGVEKFIVLVDCTGFGLSRAPPISLVTGQFKTLMHNYPMRLGKVFVVNAGTPMNMLWKIVSPILNERTRHKVFFL 144
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BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: A0A7S0N4T9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N4T9_9CRYP)

HSP 1 Score: 95.5 bits (236), Expect = 3.540e-18
Identity = 53/174 (30.46%), Postives = 90/174 (51.72%), Query Frame = 2 
Query:  716 LGRYLEAAFWSLERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVDG-RMEGNGNLRLMIYSLERAIRLMPRHSW--QYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAKMHLI 1228
            L RYL A  W+L++        + E++ WR    AD +    V + G+ G + V G DL  RPV+Y R A++  +M+ +GNLR ++Y+++RA+R M   +   +  +V+DC     +  PP+   +    +L +HYP RLG  +         L ++ +SP +   T  K+  I
Sbjct:   79 LRRYLAARNWNLDK----AKNMLRETLDWRIKFQADEISGASVFENGKTGKVFVSGLDLQGRPVLYMRPAMENSQMDHDGNLRHLVYNMDRAVRCMDEVNGVGKMVVVLDCHNYSARNAPPLRTSQATLGILQNHYPERLGQFVIIEAPWYFHLFFRAISPFIDKVTAQKILFI 248
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: D2V0F0_NAEGR (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0F0_NAEGR)

HSP 1 Score: 93.6 bits (231), Expect = 1.930e-17
Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  701 LDTIALGRYLEAAFWSLERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMPRHSWQYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAKMHLI 1228
            LD  +L R+L A  + L +  K +++ +E    WR     D +  +++ D+   G +  +G D + RP++Y   A +   +   N++L++Y++ERA+  MP    Q T ++D  G   +  PP +  K+   +L+  YP RLG     +      + W+ +SP +   TK K+H +
Sbjct:   57 LDEPSLLRFLRARDYDLNKAEKLMNSCLE----WRRTFKPDEITAKELEDESSSGKLFQRGFDKNNRPIIYMFPARENSTDYEKNIKLLVYTMERAVDAMPEGVEQMTWIIDFNGYTTRNAPPFSVAKQTLSILNECYPERLGACFMVDTPFIFNIFWRAISPFINPVTKNKIHFV 228
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: A0A6A5C3G4_NAEFO (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C3G4_NAEFO)

HSP 1 Score: 92.8 bits (229), Expect = 4.340e-17
Identity = 51/176 (28.98%), Postives = 86/176 (48.86%), Query Frame = 2 
Query:  701 LDTIALGRYLEAAFWSLERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMPRHSWQYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQARTKAKMHLI 1228
            LD  AL R+L A  + + +  K ++T +E    WR     D +  E+V  +   G +  +G D   RP+VY   A +   +   N++L++Y+LERA+  MP    Q   ++D  G   +   P++  K+   +L+  YP RLG     +      + WK +SP +   TK K+H +
Sbjct:   66 LDEAALIRFLRARDYDINKAEKLMNTCLE----WRRSFKPDEITAEEVDSEASSGKLFQRGFDKMNRPIVYMFPARENSTDYEKNIKLLVYTLERAVDAMPEGVEQMCWIIDFNGYSTRNSLPLSVAKQTLNILNDCYPERLGACFMVDTPFIFNIFWKAISPFINPVTKNKIHFV 237
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Match: A0A1C7NR83_9FUNG (CRAL-TRIO domain-containing protein C23B6.04c n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NR83_9FUNG)

HSP 1 Score: 92.4 bits (228), Expect = 5.550e-17
Identity = 53/170 (31.18%), Postives = 83/170 (48.82%), Query Frame = 2 
Query:  722 RYLEAAFWSLERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRRPVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMPRHSWQYTIVMDCQGMGLKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLC-WKVVSPLLQARTKAKMHLI 1228
            RY+ A  W  E+      T +E ++ WR     D L  E +  + E G +   G D   RP+   R  +    +G   ++ ++YSLER IRLMP H     I++D +       P +A  K+   +L +HYP RLG V F   SP   +  +KV++P + A T+ K+  +
Sbjct:   90 RYMRARKWDFEQ----AKTMLENTVRWRRDYRPDELDPEYIKPEAETGKMYYNGFDKCGRPIWIMRPRLQNSKDGERQIKHIVYSLERGIRLMPEHVENLAIIIDFKDASSSHNPSIATCKKFLDILGNHYPERLG-VAFIVKSPWFFVATFKVIAPFMDAVTRNKIKFV 254
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1067.641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQH2_ECTSI1.850e-16077.24CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
A0A835ZL56_9STRA1.380e-3643.78CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A835Z968_9STRA6.590e-3029.75CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
D7FQ39_ECTSI7.230e-2832.73CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A4D9CSV1_9STRA1.780e-2431.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2XX21_9STRA3.740e-2038.71Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0N4T9_9CRYP3.540e-1830.46Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
D2V0F0_NAEGR1.930e-1727.27CRAL-TRIO domain-containing protein n=2 Tax=Naegle... [more]
A0A6A5C3G4_NAEFO4.340e-1728.98CRAL-TRIO domain-containing protein n=2 Tax=Naegle... [more]
A0A1C7NR83_9FUNG5.550e-1731.18CRAL-TRIO domain-containing protein C23B6.04c n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1067contigH-canaliculatus_F_contig1067:4462..8892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score475.7
Seed ortholog evalue2.4e-131
Seed eggNOG ortholog2880.D8LQH2
EggNOG free text desc.intermembrane phospholipid transfer
EggNOG OGsKOG1470@1,KOG1470@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-10_005630.1
Exons5
Model size1533
Cds size1362
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928725.1261802-UTR-H-canaliculatus_F_contig1067:4461..46311622928725.1261802-UTR-H-canaliculatus_F_contig1067:4461..4631Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1067 4462..4631 -
1696845540.2806432-UTR-H-canaliculatus_F_contig1067:4461..46311696845540.2806432-UTR-H-canaliculatus_F_contig1067:4461..4631Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1067 4462..4631 -
1622928725.2574043-UTR-H-canaliculatus_F_contig1067:8891..88921622928725.2574043-UTR-H-canaliculatus_F_contig1067:8891..8892Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1067 8892..8892 -
1696845540.350907-UTR-H-canaliculatus_F_contig1067:8891..88921696845540.350907-UTR-H-canaliculatus_F_contig1067:8891..8892Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1067 8892..8892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928725.1920807-CDS-H-canaliculatus_F_contig1067:4631..49511622928725.1920807-CDS-H-canaliculatus_F_contig1067:4631..4951Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 4632..4951 -
1696845540.2953417-CDS-H-canaliculatus_F_contig1067:4631..49511696845540.2953417-CDS-H-canaliculatus_F_contig1067:4631..4951Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 4632..4951 -
1622928725.2051237-CDS-H-canaliculatus_F_contig1067:5324..54701622928725.2051237-CDS-H-canaliculatus_F_contig1067:5324..5470Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 5325..5470 -
1696845540.3070698-CDS-H-canaliculatus_F_contig1067:5324..54701696845540.3070698-CDS-H-canaliculatus_F_contig1067:5324..5470Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 5325..5470 -
1622928725.217132-CDS-H-canaliculatus_F_contig1067:5758..59321622928725.217132-CDS-H-canaliculatus_F_contig1067:5758..5932Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 5759..5932 -
1696845540.3195045-CDS-H-canaliculatus_F_contig1067:5758..59321696845540.3195045-CDS-H-canaliculatus_F_contig1067:5758..5932Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 5759..5932 -
1622928725.2290235-CDS-H-canaliculatus_F_contig1067:7538..76811622928725.2290235-CDS-H-canaliculatus_F_contig1067:7538..7681Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 7539..7681 -
1696845540.3296335-CDS-H-canaliculatus_F_contig1067:7538..76811696845540.3296335-CDS-H-canaliculatus_F_contig1067:7538..7681Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 7539..7681 -
1622928725.2426534-CDS-H-canaliculatus_F_contig1067:8312..88911622928725.2426534-CDS-H-canaliculatus_F_contig1067:8312..8891Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 8313..8891 -
1696845540.3380249-CDS-H-canaliculatus_F_contig1067:8312..88911696845540.3380249-CDS-H-canaliculatus_F_contig1067:8312..8891Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1067 8313..8891 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1067.641.1prot_H-canaliculatus_F_contig1067.641.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1067 4632..8891 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1067.641.1

>prot_H-canaliculatus_F_contig1067.641.1 ID=prot_H-canaliculatus_F_contig1067.641.1|Name=mRNA_H-canaliculatus_F_contig1067.641.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=454bp
MSVCPTCPALGCGLALRTERRTGGKRSSTIMKASRLFLVGAITYACHAQA
FFSTRSGSCRSSSSSSISSSSNGSSGGFPPHSGTESDRRLLERSGKYGEW
RRRAWVLTRGGAGSATGEREPSSRWWRSRKRRAKRQAEMAAREAAQDSLH
RSVPLAKHVLLVQGVLRQLKRWLGFIVDITTLKRLRLLRRARQGSWQHGG
PIPLRYRGLLQELRQEVAAKPGLERRAKMVHHELDTIALGRYLEAAFWSL
ERDGKRVSTFIEESIAWREMIGADRLKKEDVVDQGEKGSIIVKGHDLSRR
PVVYFRLAVDGRMEGNGNLRLMIYSLERAIRLMPRHSWQYTIVMDCQGMG
LKQMPPVAHVKRMFKLLSHHYPMRLGHVLFTNVSPSVMLCWKVVSPLLQA
RTKAKMHLIPSTWVQLNWRRPVLRLSMFLLPVKSRCGWFPEDVRQPHRIS
QDA*
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mRNA from alignment at H-canaliculatus_F_contig1067:4462..8892-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1067.641.1 ID=mRNA_H-canaliculatus_F_contig1067.641.1|Name=mRNA_H-canaliculatus_F_contig1067.641.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4431bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1067:4462..8892- (Hapterophycus canaliculatus Oshoro5f female)
GATGTCTGTCTGCCCCACATGCCCAGCTCTAGGGTGTGGACTCGCCTTGC
GCACAGAGCGCAGAACAGGGGGGAAGAGAAGCAGTACTATCATGAAGGCA
TCGCGGCTCTTTCTTGTTGGTGCCATAACGTACGCGTGTCATGCCCAGGC
CTTCTTCTCGACACGTAGCGGCAGCTGTAGAAGCAGCAGCAGCAGCAGCA
TCAGCAGCAGCAGTAACGGAAGCAGCGGCGGATTTCCACCGCACTCAGGC
ACCGAGTCCGATAGGCGATTGCTTGAGCGAAGTGGGAAGTACGGTGAATG
GCGGAGGCGGGCGTGGGTTCTGACGAGGGGCGGGGCGGGCTCAGCAACCG
GAGAGAGAGAACCGAGCTCGCGCTGGTGGAGATCGCGAAAACGTAGGGCC
AAACGGCAGGCGGAGATGGCTGCGAGAGAGGCCGCTCAAGACTCGTTGCA
TCGAAGCGTACCGCTCGCGAAACATGTTTTGCTCGTCCAAGGTGTGCTTC
GCCAATTGAAGCGTTGGTTGGGATTCATAGTCGATATCACTACGCTCAAG
CGCCTTCGCCTGTTGCGGCGAGCGAGACAGGTGCGAACATGAAAACATGG
CGTGTTCCGTCTGATTTTTCTCTGCCGGACTTGTTCGCCAGCAACGAGTA
GACACGTCTATATGATACGACTTCTGTAGCTGTACTCGTTGCCGGAAGGA
GAGGAAGGAGTGGTCAAACTTGCCTCGTTGAAAGATCGAGCATCGAAGCG
AGGAAGTGCAGCAGGAAGATGACAGGCGGGGACAAGGACATTCGTTCAAT
CTGTGTGACCCCGGGTGCGCTCGGTATAGTACGCTCCAAAGATGAGGGCT
GCAACAAACAGGAGCGGGAAATTTAGGCAACCATCATGTGCGATATTTCG
TCTGTATCACACAGACCAGAAATGGGGCCCGTCTTGACTTTTGGGACCCA
AGGCACAAGCCGAGTCCTCCCTTCTGTACGACACTCACAGGGAACTACTG
TTGTGAGCGCTTTGCCGTCCTCCTGATGAGATTTTCCATCGCCTCCTGCG
ATGGGGAATCGACGAAGTGATGCTTGGACGATGCGGGCACCCCAGTCAAA
ACCACGGTAGACTACCGCAGTGTCTCAAGTCCCGCCACTCTCGTGCCTGT
CTGCCGGGCCCTCCATTCGGGGGGATGACAATTTGCAATCGCAATGGCAT
CGGCAAAAAAGGGCTCTTGGCAGCACGGAGGGCCGATTCCCCTTCGATAT
CGGGGTCTTCTGCAAGAGCTTCGGCAAGAAGTTGCGGCGAAACCTGGTCT
TGAGAGGCGCGCAAAGATGGTGCATCACGAGTTGGATACCATCGCGCTTG
GAAGGTGAGCCCGACGTTGTTGTGCTACATACAGACCATGGATTTGTGGC
CTTCCCGCGGCGCGGCGGCCCAACCCTTATCTTCTCGTAGTCCCTGCAGG
AGTTTAGTTGCTTTGCTGCTGGAGTGATTTTTTCGTTCTTGTGGTGGTCA
CTGTCCCCACGTTTGAAGTACTTGTGGAACAGAACGTTGAGGCGAGCGCC
AACCCTCGTACGAGTATTTCTCTTCAATCTGTGAGAAGCAAAGTGTGATG
ATTTCGCCATGTCTTTTTGAAGTTGTCCGCGCATGCTTCCGCCGAGAGCG
TATTCCGTCCGCAATTGGCAAGCGGGGCACAGTTGTCGAGGACTCTTGAT
CGGTATTTAGGCCGGGACGTCAAAAGTATATACACCCATTTGAAGAGAAA
GTGCTGACAGCTCGACGGAATACTTTCTGAGCCGCGTGTCAGGAGGCGTC
TCACGAGGCCTGTGTTGAGTTCCGTATACTGAGGGTTCAGTGCGTTGGAC
TGGATAAAAACATAAGCAGAATAGAAGGCCGTGAGACTAGGTTGGGTGAA
GTATGCAGGGATTGTACGATCTACAGCGGTTGATAGTAACACTTTCATGC
AACGAATGAGGTAGTAGGCGATGCATTTATCCGGATTTGTCTACTTCCTG
TGATGAATCGCCAAGTGAACGAGTTCGCTGTCCAGGTTCTTGGCGATCCA
TGTCACGAACGCATGTCAGTCGTGGACCTGAAGGGTGTAATTCGTAGTAG
ATGGTTGCCATGAAGAGAGGGGTCAGCATGTAGACAAGCATCCTTCTTTG
CAGTGCAGGTCGCATAGTTGACGAAAGTGGCTCGAACCTGTACACACCTG
AAAACTCGCAAGCGTGGTTCGAAGAGGAGATCTTGGGATAAGAGTAGATG
TAGAAAGCGACAGAATGCACACTCGATGTAGCATTTCCGCGAAGCCTCAA
GTCTCGAGCGGAGAGAGCTACGTAAAGCACGACGGCAGGGATCCCAAAGC
CGACTGCTCCGAAAGTGAGTGGGAGGGTGTGTCGGGAACCAACGCGAATC
GGTCAACAATGGTCCTTACGCATGCATTCGAAGATGGAGACGATGATGGT
GTATTTGGAGACCCAGGAATGGGATCTTCATATTTTTTTGTCACCAGTTG
GAGTACGGGCAGAGGGAAAACGTGAAATAGGAGAAAGTTTGTACTGAGAA
TTGATTTTTCAAGAGTTAAGAGTATTTTTTAGGAGGGACATGTCCGCGTG
AGGATTTTACATTCCCCCTTATGTTTGGAATTTTGCGATCGAAACCTCGC
TCATCTCCGAGTAGACGGGATGTCGACATGCCTCCTGACCCGAATCGGAT
GGACTGGAGCAACTTACCGTGCGCTCCAGGGTCCCACCTGTTCGTTTTCT
CGATCATGTGGCTAGTTTCTTGAAAGCGTCCCGTGGATAACCGATTGAAA
GTCCATGGCATTGCAGGATTCCAGGAAGCTGTCTACGCCTGTCACTTAGG
TTTTGAAGAACCGGCTGTGGTGGCCTTGTGGTCAGGAGGTCAAAGCGGAG
GCTATGACGCCGCGTGAGCCCGGTCGATGCTCTTACTTGAAATGTTTGCT
GTTGTGCCAGATATTTGGAGGCGGCGTTTTGGTCATTGGAGCGAGATGGT
AAGCGGGTGAGCACCTTCATCGAGGAATCAATCGCCTGGCGGGAGATGAT
CGGGGCGGATCGGCTGAAGAAGGAGGACGTGGTCGATCAAGGGGAGAAAG
GGTCCATTATTGTCAAGGGTCACGACCTCAGCAGGTGACGAAGGCACCGT
CCAACCTTATTTCGTCGAGACAAAAGCAAAACTCTTAGGCGGGCGAATTC
ATAGAAGCACGCCATCGCATGAAGCAAATGAGCCCTTTGCTTTCACCAGT
GCTTTCAGCTATTGGCAGCTTGCTTTGTTTTCCCCTGCTGGGGTACGCCA
TGTTCCCCGTGTGCGTCACTCCGCGCTGTGCTCCGCTGCATGCCACGCAC
TGAGATGGTTCTACCTTGCTGATTCCAGAGAAGCACCAACGGTCAACCTC
GTATCACGTCGTTTTACCACAGGCGACCAGTGGTGTACTTTCGACTGGCG
GTTGACGGTAGGATGGAGGGAAACGGCAACTTGAGACTGATGATCTACAG
CTTGGAAAGGGCGATCCGACTAATGCCGAGACACAGCTGGCAATATACCA
TCGTCATGGACTGTCAAGGTGACGCGAAAAAAATCGGGCTTCGAAGTTTG
TCCATGTGTGTTGGTGGTTTTCAATGGTGTGCCCTCGCCCCGTCCCACCC
CCCATCTATGGGGACACCAATAATACACCTTGGCATCTGCAGCGATACCA
GTCGTGGTACTGAACGCCTTACTTCGGGCGCGGCCCGTGCTCCTTCGACG
GGTGACACAGACCAGATACGGCCGAGCTACACTACAACGCCGGCTTAAAA
TCGCCCTGGTCCTCTCCCTTGTTGTTGCACGGCCGTGTGCAGTGCGAGCA
CGACAGCCGCGCGAACCTCACCCGGTGCCGCTGATGCGCGCGCCTTCCAC
TAAGCCCTCGCGACAACCAAACGCGCGCGTATGACTGTCAGGGATGGGTC
TGAAGCAGATGCCTCCTGTAGCGCACGTGAAGAGAATGTTCAAGCTGCTG
AGCCATCACTACCCGATGCGTCTCGGGCACGTTCTCTTCACAAACGTGAG
CCCCAGCGTGATGCTCTGCTGGAAGGTGGTTTCGCCCTTGCTGCAAGCTA
GGACGAAGGCCAAGATGCACCTCATCCCTTCAACGTGGGTGCAGCTAAAT
TGGAGGCGACCAGTGCTTCGCCTGTCCATGTTTCTTCTACCTGTGAAATC
CCGATGCGGGTGGTTTCCTGAAGATGTTCGACAACCCCACCGTATCTCCC
AAGACGCGTAGATGGAGCACCCCAGGGCCACGCACACCATACACGGCTTC
CTCTGGCCGAATCATTCGGTCCAATCTTGCTTCACCACTGTTGTCTTCTC
CGTTCTCTCTTTCCTTTTCTTTGCTGGTGCCATTGCTCCTACAGGAAGCT
GGCGCAGACGGAGAAGTTTATCCACCCGAGC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1067:4462..8892-

>mRNA_H-canaliculatus_F_contig1067.641.1 ID=mRNA_H-canaliculatus_F_contig1067.641.1|Name=mRNA_H-canaliculatus_F_contig1067.641.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2724bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1067:4462..8892- (Hapterophycus canaliculatus Oshoro5f female)
ATGTCTGTCTGCCCCACATGCCCAGCTCTAGGGTGTGGACTCGCCTTGCG
CACAGAGCGCAGAACAGGGGGGAAGAGAAGCAGTACTATCATGAAGGCAT
CGCGGCTCTTTCTTGTTGGTGCCATAACGTACGCGTGTCATGCCCAGGCC
TTCTTCTCGACACGTAGCGGCAGCTGTAGAAGCAGCAGCAGCAGCAGCAT
CAGCAGCAGCAGTAACGGAAGCAGCGGCGGATTTCCACCGCACTCAGGCA
CCGAGTCCGATAGGCGATTGCTTGAGCGAAGTGGGAAGTACGGTGAATGG
CGGAGGCGGGCGTGGGTTCTGACGAGGGGCGGGGCGGGCTCAGCAACCGG
AGAGAGAGAACCGAGCTCGCGCTGGTGGAGATCGCGAAAACGTAGGGCCA
AACGGCAGGCGGAGATGGCTGCGAGAGAGGCCGCTCAAGACTCGTTGCAT
CGAAGCGTACCGCTCGCGAAACATGTTTTGCTCGTCCAAGGTGTGCTTCG
CCAATTGAAGCGTTGGTTGGGATTCATAGTCGATATCACTACGCTCAAGC
GCCTTCGCCTGTTGCGGCGAGCGAGACAGATGTCTGTCTGCCCCACATGC
CCAGCTCTAGGGTGTGGACTCGCCTTGCGCACAGAGCGCAGAACAGGGGG
GAAGAGAAGCAGTACTATCATGAAGGCATCGCGGCTCTTTCTTGTTGGTG
CCATAACGTACGCGTGTCATGCCCAGGCCTTCTTCTCGACACGTAGCGGC
AGCTGTAGAAGCAGCAGCAGCAGCAGCATCAGCAGCAGCAGTAACGGAAG
CAGCGGCGGATTTCCACCGCACTCAGGCACCGAGTCCGATAGGCGATTGC
TTGAGCGAAGTGGGAAGTACGGTGAATGGCGGAGGCGGGCGTGGGTTCTG
ACGAGGGGCGGGGCGGGCTCAGCAACCGGAGAGAGAGAACCGAGCTCGCG
CTGGTGGAGATCGCGAAAACGTAGGGCCAAACGGCAGGCGGAGATGGCTG
CGAGAGAGGCCGCTCAAGACTCGTTGCATCGAAGCGTACCGCTCGCGAAA
CATGTTTTGCTCGTCCAAGGTGTGCTTCGCCAATTGAAGCGTTGGTTGGG
ATTCATAGTCGATATCACTACGCTCAAGCGCCTTCGCCTGTTGCGGCGAG
CGAGACAGGGCTCTTGGCAGCACGGAGGGCCGATTCCCCTTCGATATCGG
GGTCTTCTGCAAGAGCTTCGGCAAGAAGTTGCGGCGAAACCTGGTCTTGA
GAGGCGCGCAAAGATGGTGCATCACGAGTTGGATACCATCGCGCTTGGAA
GGGCTCTTGGCAGCACGGAGGGCCGATTCCCCTTCGATATCGGGGTCTTC
TGCAAGAGCTTCGGCAAGAAGTTGCGGCGAAACCTGGTCTTGAGAGGCGC
GCAAAGATGGTGCATCACGAGTTGGATACCATCGCGCTTGGAAGATATTT
GGAGGCGGCGTTTTGGTCATTGGAGCGAGATGGTAAGCGGGTGAGCACCT
TCATCGAGGAATCAATCGCCTGGCGGGAGATGATCGGGGCGGATCGGCTG
AAGAAGGAGGACGTGGTCGATCAAGGGGAGAAAGGGTCCATTATTGTCAA
GGGTCACGACCTCAGCAGATATTTGGAGGCGGCGTTTTGGTCATTGGAGC
GAGATGGTAAGCGGGTGAGCACCTTCATCGAGGAATCAATCGCCTGGCGG
GAGATGATCGGGGCGGATCGGCTGAAGAAGGAGGACGTGGTCGATCAAGG
GGAGAAAGGGTCCATTATTGTCAAGGGTCACGACCTCAGCAGGCGACCAG
TGGTGTACTTTCGACTGGCGGTTGACGGTAGGATGGAGGGAAACGGCAAC
TTGAGACTGATGATCTACAGCTTGGAAAGGGCGATCCGACTAATGCCGAG
ACACAGCTGGCAATATACCATCGTCATGGACTGTCAAGGCGACCAGTGGT
GTACTTTCGACTGGCGGTTGACGGTAGGATGGAGGGAAACGGCAACTTGA
GACTGATGATCTACAGCTTGGAAAGGGCGATCCGACTAATGCCGAGACAC
AGCTGGCAATATACCATCGTCATGGACTGTCAAGGGATGGGTCTGAAGCA
GATGCCTCCTGTAGCGCACGTGAAGAGAATGTTCAAGCTGCTGAGCCATC
ACTACCCGATGCGTCTCGGGCACGTTCTCTTCACAAACGTGAGCCCCAGC
GTGATGCTCTGCTGGAAGGTGGTTTCGCCCTTGCTGCAAGCTAGGACGAA
GGCCAAGATGCACCTCATCCCTTCAACGTGGGTGCAGCTAAATTGGAGGC
GACCAGTGCTTCGCCTGTCCATGTTTCTTCTACCTGTGAAATCCCGATGC
GGGTGGTTTCCTGAAGATGTTCGACAACCCCACCGTATCTCCCAAGACGC
GTAGGGATGGGTCTGAAGCAGATGCCTCCTGTAGCGCACGTGAAGAGAAT
GTTCAAGCTGCTGAGCCATCACTACCCGATGCGTCTCGGGCACGTTCTCT
TCACAAACGTGAGCCCCAGCGTGATGCTCTGCTGGAAGGTGGTTTCGCCC
TTGCTGCAAGCTAGGACGAAGGCCAAGATGCACCTCATCCCTTCAACGTG
GGTGCAGCTAAATTGGAGGCGACCAGTGCTTCGCCTGTCCATGTTTCTTC
TACCTGTGAAATCCCGATGCGGGTGGTTTCCTGAAGATGTTCGACAACCC
CACCGTATCTCCCAAGACGCGTAG
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