Homology
BLAST of mRNA_H-canaliculatus_F_contig10633.618.1 vs. uniprot
Match:
A0A6H5KXG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG2_9PHAE)
HSP 1 Score: 254 bits (650), Expect = 1.030e-66
Identity = 306/601 (50.92%), Postives = 335/601 (55.74%), Query Frame = 1
Query: 160 HALRSKVMPILRRLAGDNDWQVRVEVACRLDSLCVVLGEQWSVVTVDILPALVADSDPDVRCEAIRCLPRLARILLGFAMSGYAEQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVENGXXXXXXDNDEGVHHASSARPSRE--GEGKERLGGXXXXXXXXDDNRVEARG---QSVR-DVEAEGP-----LVGGSGDGGCSGAPRRGN-GASGGRVDRARESEDAGDGGLDGNAAPAQPXXXXXXXXXXXXXXXADGGVRRRLTVAGCKARRGILGTLMPAAACLVDDPAAEVRGTAALTLGEMMRLMVGFEDYVATLGSSARSTPTAARSCGGVSADTGAXXXXXXXXXXDGGDGGVRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSGAAELRRG----RRICHGRVMQTAMAAAAXXXDAVAEAAMTAELIDLAGFEALDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEDGEAAGGL-IANHDDGGGGDRGDRGVDAEEGDTTSVDKPAMLLGGKGTAMAEASREGGEGASGVETPAGEDSSEKHSEER 1911
HALR KVMPIL RLAGDNDWQVRVE+ACRLDSLCV LGEQWSVVT +ILPAL+AD+DPDVRCEAIRCLPRLARILLGFAMSGYAEQ XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX E DE S P+ E GE E G +R E Q VR D EGP + SG GA+ G D GDG P GGVR RLT+AG KAR+GILG LMPAAACLVDDPAAEVRGTAA+TLGEM+RLMVGFEDYVATL S+AR+T + R+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G G ++ G RR+CHGR M+ A+A XXX EAAMTAELIDLAGFE D +GE GE GGL A HDD V+A G+ + +PA+LL G +E GVETPAG+DSSEK SEER
Sbjct: 177 HALRCKVMPILVRLAGDNDWQVRVEIACRLDSLCVALGEQWSVVTTEILPALIADTDPDVRCEAIRCLPRLARILLGFAMSGYAEQXXXXXXXXXXXXXXXXXXXXXMAPDPARSALGDXXXXXXXXXXXXXXXXXXXE------AVPGDEAFVVPSPVPPAAEAGGESGETHDGYTDANDADSSSRDETGAPEQQPVRSDAGTEGPRSSSAVASESGQXXXXXXXXXXTAGAATGADDSGVVGHTGGDGXEVXXXXADAPPGGRMSAAAEGSGDGYQGGVRGRLTLAGRKARKGILGALMPAAACLVDDPAAEVRGTAAVTLGEMLRLMVGFEDYVATLASTARTTSSRVRAGXXXXXXX------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDDGDGTVDVGFGPRPRRRVCHGRAMRAAVAXXXXXXXXXXEAAMTAELIDLAGFETAGD------GGDRTAGLDDADSKGAAGAAVQVSAPTTSGGEQQGE-GEVVGGLPFAKHDD----------VNAGGGELVAFCEPAVLLEDGGGDRSE---------EGVETPAGKDSSEKRSEER 727
BLAST of mRNA_H-canaliculatus_F_contig10633.618.1 vs. uniprot
Match:
D7FMR1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR1_ECTSI)
HSP 1 Score: 233 bits (595), Expect = 1.320e-59
Identity = 268/470 (57.02%), Postives = 289/470 (61.49%), Query Frame = 1
Query: 151 RGAHALRSKVMPILRRLAGDNDWQVRVEVACRLDSLCVVLGEQWSVVTVDILPALVADSDPDVRCEAIRCLPRLARILLGFAMSGYAEQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVENGXXXXXXDNDEGVHHASSARPSREGEGKERLGGXXXXXXXXDDNRVEARGQSVRDVEAEGPLVGGSGDGGCSGAPRRGNGASGGRVDRARESEDAGDGGLDGNAAPAQPXXXXXXXXXXXXXXXADGGVRRRLTVAGCKARRGILGTLMPAAACLVDDPAAEVRGTAALTLGEMMRLMVGFEDYVATLGSSARSTPTAARSCGGVSADTGAXXXXXXXXXXDGGDGGVRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSGAAELRRG----RRICHGRVMQTAMAAAAXXXDAVAEAAMTAELIDLAGFEALDD 1548
R HALR KVMPIL RLAGDNDWQVRVE+ACRLDSLCV LGEQWSVVT +ILPALVAD DPDVRCEAIRCLPRLARILLGFAMSGYAEQ XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX + +H + + ++ G D R S V +E SG G GA+ G D E GD XXXXXXXXXXXXX GGVR RLT+AG KAR+GILG LMPAA CL+DDPAAEVRGTAA+TLGEM+RLMVGFEDYVATL S+ARS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G GA ++ G RR+CHGR M+ A+A XXX EAAMTAELIDLAGFE D
Sbjct: 1172 REGHALRCKVMPILVRLAGDNDWQVRVEIACRLDSLCVALGEQWSVVTAEILPALVADIDPDVRCEAIRCLPRLARILLGFAMSGYAEQXXXXXXXXXXXXXXARSALGXXXXXXXXXXXXXXXXXXXXXXLGEEAFLVPSPVPPAAEAGGDSGKTYHGYTDANDADRSSRDETGAPEQQPARDDAGTEGQRSSSA--VASE------SGQIGXXXXXXXTAGAATGADDSGVVGETGGDXXXXXXXXXXXXXXXXXXXXXXXXXSGYQGGVRGRLTLAGRKARKGILGALMPAAGCLIDDPAAEVRGTAAVTLGEMLRLMVGFEDYVATLASTARSXXXXXXXXXXXX---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDGGDGAVDVGFGPRPRRRVCHGRAMRAAVAXXXXXXXXXXEAAMTAELIDLAGFETAGD 1612
BLAST of mRNA_H-canaliculatus_F_contig10633.618.1 vs. uniprot
Match:
A0A1E7FMC6_9STRA (ARM repeat-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMC6_9STRA)
HSP 1 Score: 73.9 bits (180), Expect = 1.280e-9
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 160 HALRSKVMPILRRLAGDNDWQVRVEVACRLDSLCVVLGEQWSVVTVDILPALVADSDPDVRCEAIRCLPRLARILL 387
+ L+ K++P+ RLA D VR+ VA + + LC LG+ WS V +D+L AL++DSD VR EA+ C+PRLA I+L
Sbjct: 755 YLLQCKLLPVATRLAEDRAPHVRLAVAAQCERLCDALGDHWSSVIIDVLVALLSDSDERVRGEAVLCVPRLADIVL 830
BLAST of mRNA_H-canaliculatus_F_contig10633.618.1 vs. uniprot
Match:
A0A7S0UH36_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH36_9STRA)
HSP 1 Score: 73.6 bits (179), Expect = 1.330e-9
Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 160 HALRSKVMPILRRLAGDNDWQVRVEVACRLDSLCVVLGEQWSVVTVDILPALVADSDPDVRCEAIRCLPRLARILL 387
+ L+ K++P+ RLA D VR+ VA + + LC LG+ WS V +D+L AL+ DSD VR EA+ C+PRLA I+L
Sbjct: 280 YLLQCKLLPVATRLAEDRAPHVRLAVAAQCERLCDALGDHWSSVIIDVLVALLTDSDERVRGEAVLCVPRLADIVL 355
BLAST of mRNA_H-canaliculatus_F_contig10633.618.1 vs. uniprot
Match:
A0A448Z2A9_9STRA (PDZ domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2A9_9STRA)
HSP 1 Score: 73.6 bits (179), Expect = 1.780e-9
Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 160 HALRSKVMPILRRLAGDNDWQVRVEVACRLDSLCVVLGEQWSVVTVDILPALVADSDPDVRCEAIRCLPRLARILL 387
+ L+ K++P+ RLA D VR+ VA + + LC LG+ WS V +D+L AL+ DSD VR EA+ C+PRLA I+L
Sbjct: 1004 YLLQCKLLPVATRLAEDRAPHVRLAVAAQCERLCDALGDHWSSVIIDVLVALLTDSDERVRGEAVLCVPRLADIVL 1079
BLAST of mRNA_H-canaliculatus_F_contig10633.618.1 vs. uniprot
Match:
A0A7S2L3W3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L3W3_9STRA)
HSP 1 Score: 63.9 bits (154), Expect = 1.410e-6
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 160 HALRSKVMPILRRLAGDNDWQVRVEVACRLDSLCVVLGEQWSVVTVDILPALVADSDPDVRCEAIRCLPRLAR-ILLG 390
+ L+ K++P+ LA D VR+ VA + D L +GE W + +D+L AL++DSD VR EA C+PR A ++LG
Sbjct: 487 YLLQCKLLPVASNLAEDRIASVRLSVAAQCDRLVNAMGEHWFNIIIDLLQALLSDSDERVRSEATLCMPRFAESVILG 564
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10633.618.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 6
0 1 Expect = 1.03e-66 / Id = 50.92 Expect = 1.32e-59 / Id = 57.02 Expect = 1.28e-9 / Id = 47.37 Expect = 1.33e-9 / Id = 47.37 Expect = 1.78e-9 / Id = 47.37 Expect = 1.41e-6 / Id = 41.03 Sequence A0A6H5KXG2_9PHAE D7FMR1_ECTSI A0A1E7FMC6_9STRA A0A7S0UH36_9STRA A0A448Z2A9_9STRA A0A7S2L3W3_9STRA back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10633.618.1
>prot_H-canaliculatus_F_contig10633.618.1 ID=prot_H-canaliculatus_F_contig10633.618.1|Name=mRNA_H-canaliculatus_F_contig10633.618.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=921bp
VLDETSARGAGRKEDQPQPDLQPQQQQQQQQQQHSPDNAITGSVAVWDTR back to top mRNA from alignment at H-canaliculatus_F_contig10633:261..4140-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10633.618.1 ID=mRNA_H-canaliculatus_F_contig10633.618.1|Name=mRNA_H-canaliculatus_F_contig10633.618.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3880bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10633:261..4140- (Hapterophycus canaliculatus Oshoro5f female)GTGCTGGACGAGACAAGCGCGCGAGGCGCTGGGAGAAAGGAAGATCAGCC
ACAACCAGACCTGCAACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
ATAGTCCCGACAACGCCATCACAGGTTCGGTAGCGGTCTGGGACACGAGG
AGGGGGGCCCACGCTCTCCGGAGCAAGGTGATGCCGATTCTGCGCCGGCT
GGCGGGAGACAACGATTGGCAG GTGGGTTTGGAGCGTGTCCATGTAGGAA
TGCCGGAGGCTTTCGGGGGGAAGAGGGGAGGGTGCTTCCGCGGTGCCCCT
CCTGCCCCTCCCCCCCCGCCGCCGCCGCTTTTTCGTAAACTGCTCGGACT
GCCGTGGGGATAGCGATTCGAACGTGACTTTGAAAGGAATGCTGATGCCG
TTCTTGCAGGAGGTGCACCCTCCGCTATCCCGGGACATCAATAGGGGGTT
CCTTCGCCGCTCGTCCGGCTGGCAGGGGGTGGATGGCCACCGCCGATGGT
CGGACGCGTCGCTCATCTTTCCCCGCGCTCGTTCCGTCCTCTCGCGGAGT
GATGCAGCCCGCGCCGCCCGCCTGCCTGCCTGCCTGACTACATTTCCCTC
GTTTTTTTCGTCAGGTGCGCGTGGAAGTCGCGTGCCGCCTGGACTCGCTG
TGCGTGGTCTTGGGCGAGCAGTGGTCGGTGGTGACCGTGGATATCCTGCC
CGCCCTCGTTGCAGACTCCGATCCCGACGTCCGATGCGAG GTGCGTGGTG
TGCACTGTGGGCGGGAGGCGGGGTTGGACGTAGCGCGATGAGAGAGTGTC
CTTCCCTTTTCTCTGCGAACGGTGCGTGCGCGTGCGTGCTTGCGTGTTCG
TTCTCTTCTCCGCCGACGTGGTCGTGTTCGAGACTCTCGCCGACGTTTCG
CCGCTTCCGTGGTGTTTTTTTCGTCGCCGGGCGTGTGTCTCGCGTCATCG
CTTTAACCCTGTCGTGATTGTGTTGATAGCTGCGGTGTTGTTTCGACGCT
CCTGTCGACCCCCCCCCGCCTCGCGTAGTCTCAAGTCCCCGCGCTCTTCG
CGCATCGTGCCTCGTGGGTCCGGTCGCGATGCTTGCCGACGGCGTTGACG
ACGACCACAACAACAACCCTCAAACAACGAAACACCACGCCGCTTCCACA
CCGCGCCAGGCGATCCGATGCCTCCCGCGCCTGGCTAGGATCTTGCTCGG
CTTCGCGATGTCGGGCTACGCCGAGCAGCAGCACCAGCAGCACCAGCACC
AGCACCAGCAGCCGGGCTCGCCCGCGGCGGCGGCGTCCCCGGCCCCGTCC
CGAGGGGTCGCAAGCCAAGCAACCACCGCGCCGCTGGCGAGGGAGCGAGA
GCAAGAGGAGGTGGAGGGCACCGGCGCGGGCGTCGAGAACGGTGGCGGTG
GCGGGACCGATGACAACGACGAAGGGGTGCATCACGCGTCCTCTGCGAGG
CCGTCGCGGGAGGGGGAAGGCAAGGAGAGGCTCGGCGGCGGCGGCGGCGG
CGGCAGCGGCGGCGACGACAATCGGGTTGAGGCTCGGGGGCAATCGGTTC
GAGACGTCGAGGCAGAGGGGCCGCTCGTTGGTGGTAGCGGCGACGGTGGT
TGTTCTGGGGCTCCACGCCGTGGAAACGGCGCGAGCGGTGGTCGCGTAGA
CCGCGCGCGAGAAAGCGAAGACGCCGGCGACGGGGGCCTAGACGGCAACG
GTGGCGGCGGCGACGAGAGGAGCAGGGGCGGAGACGACGGCGACGAGAGC
GAGGCGGGAGCGACGGCGACGTCCGCAGCAGCACCAGCAGCAGCACCAGC
AGCACCAGCACAACCACCACCACCACCACCATCGGCAGCGACGATGGGAG
GGGCGGCGGGCGCCGACGGCGGCGTGAGGAGGCGTTTGACCGTGGCGGGG
TGCAAGGCGCGGAGGGGCATCCTGGGCACCCTCATGCCCGCGGCGGCCTG
CCTGGTCGACGACCCCGCGGCGGAGGTGAGGGGAACGGCGGCCCTGACTC
TCGGCGAGATGATGCGCCTCATGGTCGGCTTCGAGGACTACGTCGCCACT
CTGGGCTCCTCCGCTAGGAGCACGCCGACCGCGGCCCGCTCCTGCGGCGG
CGTCTCCGCCGACACCGGTGCCGGCGCGGGGTCCGGAGCGGGTGCTGCTG
CGGACGGTGGTGACGGCGGGGTGAGGACCGGAGGCGGGACCAACGCGGCT
TCTGCTCCTGCTGGTGGCGGCGGCGGCGGCGGCGGCGGCATGGAGACGTG
TTGCTGTGTGACGGGGGAAGACGAGGACGAGGGC GTCTTGGTCGTCGAAG
GGGCGGCCGACGCCCTCAGCACTGGGGACCGAGAGGGACAAAGCGGGAGC
GGGAGCGGCGCCGCCGAGCTGCGGCGGGGGCGGCGCATCTGCCATGGGAG
AGTTATGCAGACGGCGATGGCGGCGGCGGCGGCCGCCGCCGATGCCGTCG
CGGAGGCCGCCATGACCGCGGAGTTGATCGACCTCGCCGGGTTCGAGGCC
TTGGATGACGACGAGGACGACGACGACGACGATGACCACGACGGCTCTGG
CGGCGGCGAAGGTGATCCCGCGGCAGCAGGAGCCGCCGCCGCCGCCGCCG
CCGCTACGCCGGCCGAAGGAGAGCAGGAGGGGGAGGACGGCGAGGCGGCG
GGAGGACTTATCGCTAATCACGACGACGGCGGCGGCGGCGACCGCGGCGA
CCGCGGCGTGGACGCGGAGGAAGGAGATACGACGTCGGTCGACAAGCCGG
CGATGCTGCTTGGTGGAAAGGGGACGGCTATGGCGGAGGCAAGTAGAGAA
GGAGGGGAAGGCGCATCGGGCGTGGAGACGCCGGCCGGGGAAGACTCGTC
TGAGAAGCATTCCGAAGAACGGCCTTGTTCTTTCCCCTCCGCCGCGACCC
CTGGCGGAGTCCCCGCCCCCGGCGTGGAGGCCGCCGATGCAACCGGTGAG
GAAATTCGCGCTAGCATGCGCGGTTTTGGCGGCAGCAGCGGCGCCGGCGG
CGATGCCGGCACGGGTGCAGATGGCGCGAGCGCCGCAAGCATTTCCGGGC
TCCGTCGAGGGCGGCAAGAAGAAGGAGAGGGTGAGGTTGCGATCGTTGCC
GGGGTAACCCCTGCCGCTCTCGCCAGCGGTCGCGACGGCGGCGGCGGCGG
CGACGGTGAGAAGGAGGACGACGACGGCAGCGACAGCGGCAGCAGCCTCG
ACAGCACCGGTGCCGTCAACGGCCGCGACGACCTCGGCGAAGCGGTGCCC
ACCTACGAGGAACTGGCCGCTGCCGCCGCCGCCGCCGCCGCCCCTACCGC
CTCCCTCGACGAACTCAAGGCGGCGGCCGGCGCCAGCGCTGAACCCGCGG
CAACGGGCGAGGTGGAAGGCAGCACCAACGCCGACGCCGACGGCAACGGC
AACGGCAACAACGGAGGCGAGGACGACCCCCTCATCGTGCTTGTCACGCA
GCTGCTGCTCGACGCCGACACGTACGTCGCGTGCACGATGCTCCAGGCCT
TGCGCCCCGG GTGGATGCCGGAGCTCGGGCCCGGCCCCGGTCCGACGCCT
CTCTCTCCTACTCACCGCAGCCGCGGCGGCAGCGACGGCGGCGGCGGCAG
CGGTAGTTCCGCCCGCAACGGAGGGATGCCTGCCGTTGCGGGGCAGGAGC
GTGGGTCAGGGTTTAGCGCGGTTGGTGGAGCGGCGCCGGTGGGCGATACT
CCGGTTGACGCTGGCGACGGGCGGGGTGCTCTGGGGGTCGTCGATGATTG
CGGCGGCGGCGGCGGGAGCGTCGGTGGTAGCGGTGGTGGCGAGTTCCGAG
ATGACAGAACAGTAGGGGAAGGCGGCGGCGGCGTAAGCCCCGTTCCCAGG
CGAAGCTGCCCGTTGACCCCAGCGCAGGTG back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10633:261..4140-
>mRNA_H-canaliculatus_F_contig10633.618.1 ID=mRNA_H-canaliculatus_F_contig10633.618.1|Name=mRNA_H-canaliculatus_F_contig10633.618.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5526bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10633:261..4140- (Hapterophycus canaliculatus Oshoro5f female) back to top