Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 369 |
| Cds size | 369 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928720.2970457-CDS-H-canaliculatus_F_contig10632:3350..3719 | 1622928720.2970457-CDS-H-canaliculatus_F_contig10632:3350..3719 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10632 3351..3719 + |
| 1696845538.4625926-CDS-H-canaliculatus_F_contig10632:3350..3719 | 1696845538.4625926-CDS-H-canaliculatus_F_contig10632:3350..3719 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10632 3351..3719 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10632.616.1 >prot_H-canaliculatus_F_contig10632.616.1 ID=prot_H-canaliculatus_F_contig10632.616.1|Name=mRNA_H-canaliculatus_F_contig10632.616.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=123bp
MSGAGQRQHGGQGRGAGGRGNRSDGYGGERHRYPYDGNKFCSWHNMNGHS
DDECHAQQRGRHHGGGGAPPQQRGGAPPWQRGNNNNNGQRYGGGGGTGGY
GGRGPGYVAPEQLPAYPEPPGG* back to topmRNA from alignment at H-canaliculatus_F_contig10632:3351..3719+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10632.616.1 ID=mRNA_H-canaliculatus_F_contig10632.616.1|Name=mRNA_H-canaliculatus_F_contig10632.616.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=369bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10632:3351..3719+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCTGGCGCTGGGCAGCGCCAGCATGGGGGGCAGGGACGAGGTGCAGG
CGGTCGAGGGAACAGGAGTGACGGATACGGAGGAGAACGGCACAGATACC
CGTACGACGGCAACAAGTTCTGCTCGTGGCACAACATGAACGGGCACTCT
GACGATGAGTGCCATGCCCAGCAGCGGGGAAGGCACCACGGAGGAGGCGG
AGCTCCCCCGCAGCAGCGGGGTGGAGCACCTCCGTGGCAACGTGGCAACA
ACAACAACAACGGACAGAGGTATGGAGGTGGTGGCGGAACGGGCGGTTAC
GGCGGTCGTGGCCCGGGGTACGTAGCCCCCGAGCAGCTGCCCGCCTACCC
CGAGCCCCCGGGGGGATAG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10632:3351..3719+ >mRNA_H-canaliculatus_F_contig10632.616.1 ID=mRNA_H-canaliculatus_F_contig10632.616.1|Name=mRNA_H-canaliculatus_F_contig10632.616.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=738bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10632:3351..3719+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCTGGCGCTGGGCAGCGCCAGCATGGGGGGCAGGGACGAGGTGCAGG
CGGTCGAGGGAACAGGAGTGACGGATACGGAGGAGAACGGCACAGATACC
CGTACGACGGCAACAAGTTCTGCTCGTGGCACAACATGAACGGGCACTCT
GACGATGAGTGCCATGCCCAGCAGCGGGGAAGGCACCACGGAGGAGGCGG
AGCTCCCCCGCAGCAGCGGGGTGGAGCACCTCCGTGGCAACGTGGCAACA
ACAACAACAACGGACAGAGGTATGGAGGTGGTGGCGGAACGGGCGGTTAC
GGCGGTCGTGGCCCGGGGTACGTAGCCCCCGAGCAGCTGCCCGCCTACCC
CGAGCCCCCGGGGGGATAGATGTCTGGCGCTGGGCAGCGCCAGCATGGGG
GGCAGGGACGAGGTGCAGGCGGTCGAGGGAACAGGAGTGACGGATACGGA
GGAGAACGGCACAGATACCCGTACGACGGCAACAAGTTCTGCTCGTGGCA
CAACATGAACGGGCACTCTGACGATGAGTGCCATGCCCAGCAGCGGGGAA
GGCACCACGGAGGAGGCGGAGCTCCCCCGCAGCAGCGGGGTGGAGCACCT
CCGTGGCAACGTGGCAACAACAACAACAACGGACAGAGGTATGGAGGTGG
TGGCGGAACGGGCGGTTACGGCGGTCGTGGCCCGGGGTACGTAGCCCCCG
AGCAGCTGCCCGCCTACCCCGAGCCCCCGGGGGGATAG back to top
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