Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 349 |
| Cds size | 342 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928719.8632777-CDS-H-canaliculatus_F_contig1063:778..1120 | 1622928719.8632777-CDS-H-canaliculatus_F_contig1063:778..1120 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1063 779..1120 + |
| 1696845538.2039783-CDS-H-canaliculatus_F_contig1063:778..1120 | 1696845538.2039783-CDS-H-canaliculatus_F_contig1063:778..1120 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1063 779..1120 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928719.8799908-UTR-H-canaliculatus_F_contig1063:1120..1126 | 1622928719.8799908-UTR-H-canaliculatus_F_contig1063:1120..1126 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1063 1121..1126 + |
| 1696845538.2120006-UTR-H-canaliculatus_F_contig1063:1120..1126 | 1696845538.2120006-UTR-H-canaliculatus_F_contig1063:1120..1126 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1063 1121..1126 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1063.613.1 >prot_H-canaliculatus_F_contig1063.613.1 ID=prot_H-canaliculatus_F_contig1063.613.1|Name=mRNA_H-canaliculatus_F_contig1063.613.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=114bp
KGNTKERYQDPKEGQYRDPEEGRWSKRCSSVICRETSTIASPPPSAFKSQ
IDRQGNKRTACVWTSETAASAWGAGRQNKYPTARLFLSYSPGRGLFSCQR
TPDRAGTDLSLLV* back to topmRNA from alignment at H-canaliculatus_F_contig1063:779..1126+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1063.613.1 ID=mRNA_H-canaliculatus_F_contig1063.613.1|Name=mRNA_H-canaliculatus_F_contig1063.613.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=348bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1063:779..1126+ (Hapterophycus canaliculatus Oshoro5f female)
AAAGGGAACACAAAGGAGCGGTACCAAGATCCAAAAGAGGGGCAGTACCG
AGATCCAGAAGAGGGGCGATGGTCTAAGCGATGTAGCAGTGTGATATGCC
GGGAGACATCCACCATTGCATCCCCGCCACCATCGGCTTTCAAGTCTCAA
ATCGATCGACAGGGTAACAAGAGAACAGCGTGTGTGTGGACCTCGGAGAC
AGCAGCTTCCGCGTGGGGAGCAGGGAGACAAAACAAATACCCTACGGCAA
GACTCTTTCTCTCCTATTCACCTGGGAGGGGGCTCTTTTCGTGCCAACGC
ACACCGGATAGGGCGGGGACCGATCTCAGCTTGCTGGTGTGATGTGGG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1063:779..1126+ >mRNA_H-canaliculatus_F_contig1063.613.1 ID=mRNA_H-canaliculatus_F_contig1063.613.1|Name=mRNA_H-canaliculatus_F_contig1063.613.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=684bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1063:779..1126+ (Hapterophycus canaliculatus Oshoro5f female)
AAAGGGAACACAAAGGAGCGGTACCAAGATCCAAAAGAGGGGCAGTACCG
AGATCCAGAAGAGGGGCGATGGTCTAAGCGATGTAGCAGTGTGATATGCC
GGGAGACATCCACCATTGCATCCCCGCCACCATCGGCTTTCAAGTCTCAA
ATCGATCGACAGGGTAACAAGAGAACAGCGTGTGTGTGGACCTCGGAGAC
AGCAGCTTCCGCGTGGGGAGCAGGGAGACAAAACAAATACCCTACGGCAA
GACTCTTTCTCTCCTATTCACCTGGGAGGGGGCTCTTTTCGTGCCAACGC
ACACCGGATAGGGCGGGGACCGATCTCAGCTTGCTGGTGTGAAAAGGGAA
CACAAAGGAGCGGTACCAAGATCCAAAAGAGGGGCAGTACCGAGATCCAG
AAGAGGGGCGATGGTCTAAGCGATGTAGCAGTGTGATATGCCGGGAGACA
TCCACCATTGCATCCCCGCCACCATCGGCTTTCAAGTCTCAAATCGATCG
ACAGGGTAACAAGAGAACAGCGTGTGTGTGGACCTCGGAGACAGCAGCTT
CCGCGTGGGGAGCAGGGAGACAAAACAAATACCCTACGGCAAGACTCTTT
CTCTCCTATTCACCTGGGAGGGGGCTCTTTTCGTGCCAACGCACACCGGA
TAGGGCGGGGACCGATCTCAGCTTGCTGGTGTGA back to top
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