Homology
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI)
HSP 1 Score: 340 bits (873), Expect = 1.660e-102
Identity = 174/193 (90.16%), Postives = 180/193 (93.26%), Query Frame = 1
Query: 1 RSVSPQASDVPVLQEDSAEEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEIAAA 579
RSVSPQAS+VP LQEDSAEEVMLKVAAHTHYMPEHW GKAHTV VR ELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIV+FVTEHTV+V GVGSVCSYS+FDFGRYGDEDYAAPS ASMAEVG + +R RRR DTTAQGKMEKSFLNFR HYPDWQPGPAGQEMIDRLAGFQLQCLRKDAE AAA
Sbjct: 412 RSVSPQASEVPTLQEDSAEEVMLKVAAHTHYMPEHWLGKAHTVVVRAELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERAR-RRRPDTTAQGKMEKSFLNFRAHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAAA 603
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE)
HSP 1 Score: 247 bits (630), Expect = 1.000e-68
Identity = 140/195 (71.79%), Postives = 146/195 (74.87%), Query Frame = 1
Query: 1 RSVSPQASDVPVLQEDSAEEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFR--THYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEIAAA 579
RSVSPQAS+VP LQEDSAEEVMLK ELLAVLFAPVILCFSMPSCAQEIV+FVTEHTV+V GVGSVCSYS+FDFGRYGDEDYAAPS ASMAEVG + +R RRR DTTAQGKMEKSFLNFR THYPDWQPGPAGQEMIDRLAGFQLQCLRKDAE AAA
Sbjct: 403 RSVSPQASEVPTLQEDSAEEVMLK--------------------------------------ELLAVLFAPVILCFSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERAR-RRRPDTTAQGKMEKSFLNFRHVTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAAA 558
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A0A7S2STW1_9STRA (Autophagy-related protein 9 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STW1_9STRA)
HSP 1 Score: 158 bits (400), Expect = 4.600e-39
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 1
Query: 25 DVPVLQEDSAEEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRKD 561
++PV A+E+M V HTH+ PE WR T+ VR E L +F YKAQLF EE+L VL AP +LC++MP A I+ F+ +HTV + +G+VC YSLFDF +YGDE Y AP+ + E T QGK+EKSFLNF+ ++P+W G G + I+RL FQ L D
Sbjct: 184 NIPVEANLDADEMMEAVKEHTHFFPETWRRLCGTLRVRDEFLSMFKYKAQLFFEEILVVLAAPYVLCYAMPQAADRILAFIRDHTVHKDTIGAVCGYSLFDFRKYGDERYGAPNVRTDGEE--------------TEQGKLEKSFLNFKINHPEWDCGEEGNQFINRLVNFQEDHLHHD 348
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A0A7S2D6I8_9STRA (Autophagy-related protein 9 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6I8_9STRA)
HSP 1 Score: 143 bits (361), Expect = 1.520e-36
Identity = 73/142 (51.41%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 133 VRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRK 558
VR + +F +K QLF +E+L VL AP +LC SMP+ A++++ F+ EHTVDVEG+GSVC YSLFDFGRYGDE YAAP S + GR T QGKMEKSFLNF+ ++PDW G G I ++ FQ Q L +
Sbjct: 1 VRDQFFSIFKFKVQLFCDEILVVLLAPFVLCVSMPAAAEDMLRFIREHTVDVEGIGSVCGYSLFDFGRYGDERYAAPKDGSEVD-GR------------TEQGKMEKSFLNFKINHPDWDCGEQGNTFIAKICAFQEQQLEE 129
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A0A2P6V2C1_9CHLO (Autophagy-related 9 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V2C1_9CHLO)
HSP 1 Score: 153 bits (386), Expect = 1.820e-35
Identity = 78/160 (48.75%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAG 534
E +++V AHTHY+P HWRG+AHT EV+ + LF YKA LF EEL ++L P++L FS+P CA ++ FV EHTV VEGVG VCS + FDF R+G+ Y AP+ A R QGKMEKSFL+F Y W+P AGQ ++ +LAG
Sbjct: 523 ETALMEVVAHTHYLPRHWRGRAHTREVQGQFQALFQYKALLFWEELSSILLTPLLLWFSLPQCAGAVLAFVEEHTVHVEGVGDVCSLAAFDFQRHGNARYGAPAAAPKLLRSR--------------QGKMEKSFLSFAATYTGWEPDAAGQALLQQLAG 668
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A0A388JMX2_CHABU (Autophagy-related protein 9 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JMX2_CHABU)
HSP 1 Score: 150 bits (379), Expect = 1.280e-34
Identity = 81/177 (45.76%), Postives = 112/177 (63.28%), Query Frame = 1
Query: 55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEIAAANT 585
+E M +A HTHYMP+HWRG A T VR E LF +KA+LFLEE++++ P IL FS+P CA+ IVDF+ + TV VEGVG VCS S+FDF +G++ Y +P S RRS +QGKMEKSF++F+ +YP+W+PG G++++ L+ F+ D E A T
Sbjct: 583 QESMDVLAQHTHYMPKHWRGAADTDVVRAEFESLFQFKAKLFLEEMMSIFITPFILWFSLPKCAECIVDFIQDFTVYVEGVGHVCSLSVFDFEMHGNKRYGSPCHTSKD-----------RRS---SQGKMEKSFISFKANYPNWEPGDLGKKVLKTLSEFRSHQEELDVEQCAQAT 745
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A0A2K1JYE4_PHYPA (Autophagy-related protein 9 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JYE4_PHYPA)
HSP 1 Score: 149 bits (376), Expect = 2.440e-34
Identity = 73/162 (45.06%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 61 VMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQ 546
VM ++ +HTHYMP+HWRG +T +VR E GLF YKA LF EE+++++ P IL F++P C ++++ FV + TV +EGVG VCS S+FDF +G+ Y +P S RRS +QGKMEKSF++F+T+YP+W+P G++++ LA F+L+
Sbjct: 449 VMRQITSHTHYMPKHWRGAENTDKVRIEFEGLFKYKAALFFEEIMSIIVTPFILIFALPKCVEDVLLFVEDFTVYIEGVGHVCSLSIFDFEHHGNSKYGSPFHTSKD-----------RRS---SQGKMEKSFISFKTNYPNWEPDGNGKQLMSVLADFRLR 596
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A9S9L7_PHYPA (Autophagy-related protein 9 (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9L7_PHYPA)
HSP 1 Score: 147 bits (371), Expect = 2.620e-34
Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 1
Query: 61 VMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQ 540
VM ++ +HTHYMP+HWRG +T +VR E GLF YKA LF EE+++++ P IL F++P C ++++ FV + TV +EGVG VCS S+FDF +G+ Y +P S RRS +QGKMEKSF++F+T+YP+W+P G++++ LA F+
Sbjct: 440 VMRQITSHTHYMPKHWRGAENTDKVRIEFEGLFKYKAALFFEEIMSIIVTPFILIFALPKCVEDVLLFVEDFTVYIEGVGHVCSLSIFDFEHHGNSKYGSPFHTSKD-----------RRS---SQGKMEKSFISFKTNYPNWEPDGNGKQLMSVLADFR 585
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
E1ZM33_CHLVA (Autophagy-related protein 9 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZM33_CHLVA)
HSP 1 Score: 145 bits (367), Expect = 3.650e-33
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFH-----YKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLA 531
E +++V HTHY+P HWRG+AHT EV+ E LF +KA LFLEEL ++L P++L FS+P CA ++ FV +TV VEGVG VCS + FDF R+G+ Y +P+ A R QGKMEKSFL+F YP W+P PAGQ+++ +LA
Sbjct: 394 EAALMEVVLHTHYLPRHWRGRAHTREVQQEFEALFQVGRQAFKALLFLEELSSILLTPLLLWFSLPQCAGAVLSFVESNTVYVEGVGDVCSLAAFDFQRHGNAKYGSPAAAPKLYRSR--------------QGKMEKSFLSFAATYPAWEPDPAGQQLLAQLA 543
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match:
A0A7J7PN86_9CHLO (Autophagy-related protein 9 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PN86_9CHLO)
HSP 1 Score: 145 bits (366), Expect = 4.600e-33
Identity = 73/158 (46.20%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRL 528
E M +V HTH++P HWRG+AH+ EV+ L +F +K LFLEEL +VL P IL +S+P CA I+ FV E T VEGVG VCS ++FDFGR+G+ Y AP+ A + + QGKMEKSFL F YP W+P AG++M+ +
Sbjct: 470 ERAMAEVVLHTHHLPRHWRGRAHSAEVQQSLNSMFSFKLLLFLEELASVLLTPFILAYSLPRCAGAILQFVAETTTRVEGVGDVCSLAVFDFGRHGNSKYGAPAHAPAKRL-------------RSKQGKMEKSFLTFVATYPTWRPPAAGRQMLTNI 614
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.66e-102 / Id = 90.16 Expect = 1.00e-68 / Id = 71.79 Expect = 4.60e-39 / Id = 45.25 Expect = 1.52e-36 / Id = 51.41 Expect = 1.82e-35 / Id = 48.75 Expect = 1.28e-34 / Id = 45.76 Expect = 2.44e-34 / Id = 45.06 Expect = 2.62e-34 / Id = 45.00 Expect = 3.65e-33 / Id = 46.34 Expect = 4.60e-33 / Id = 46.20 Sequence D7FZF2_ECTSI A0A6H5K9U8_9PHAE A0A7S2STW1_9STRA A0A7S2D6I8_9STRA A0A2P6V2C1_9CHLO A0A388JMX2_CHABU A0A2K1JYE4_PHYPA A9S9L7_PHYPA E1ZM33_CHLVA A0A7J7PN86_9CHLO Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 310.8 Seed ortholog evalue 8.4e-82 Seed eggNOG ortholog 2880.D7FZF2 Preferred name ATG9A KEGG ko ko:K02349,ko:K17907,ko:K19672 KEGG TC 9.A.15.1 KEGG Pathway ko04136,ko04137,ko04138,ko04140,map04136,map04137,map04138,map04140 GOs GO:0000003,GO:0000045,GO:0000139,GO:0000272,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000407,GO:0000421,GO:0000422,GO:0001817,GO:0001818,GO:0001894,GO:0001932,GO:0001934,GO:0002165,GO:0002376,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006914,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007552,GO:0007586,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009251,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010498,GO:0010562,GO:0010604,GO:0010623,GO:0010646,GO:0010647,GO:0010648,GO:0010669,GO:0012501,GO:0012505,GO:0012506,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016052,GO:0016192,GO:0016236,GO:0016237,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0019954,GO:0022411,GO:0022600,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030054,GO:0030154,GO:0030163,GO:0030277,GO:0030587,GO:0030659,GO:0031090,GO:0031152,GO:0031153,GO:0031224,GO:0031288,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032258,GO:0032268,GO:0032270,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032588,GO:0032648,GO:0032688,GO:0032872,GO:0032874,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034497,GO:0034599,GO:0034613,GO:0034727,GO:0035069,GO:0035096,GO:0040011,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042592,GO:0042594,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0043632,GO:0043933,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044257,GO:0044260,GO:0044262,GO:0044264,GO:0044265,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0044804,GO:0044805,GO:0045087,GO:0045937,GO:0046328,GO:0046330,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048707,GO:0048856,GO:0048869,GO:0048871,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051603,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055037,GO:0055114,GO:0060033,GO:0060249,GO:0060255,GO:0060729,GO:0061709,GO:0061723,GO:0061726,GO:0061912,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070302,GO:0070304,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071704,GO:0071840,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090382,GO:0090702,GO:0097708,GO:0098542,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098791,GO:0098805,GO:0098827,GO:0098852,GO:0099120,GO:1901564,GO:1901565,GO:1901575,GO:1902531,GO:1902532,GO:1902533,GO:1903008,GO:1905037 EggNOG free text desc. process utilizing autophagic mechanism EggNOG OGs KOG2173@1,KOG2173@2759 EC 2.7.7.7 COG Functional cat. U Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko02000,ko03029,ko03036,ko03400,ko04131 Hectar predicted targeting category other localisation Ec32 ortholog description Autophagy-related protein 9 Ec32 ortholog Ec-19_003090.1 Exons 8 Model size 1690 Cds size 1116 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622928717.60512-UTR-H-canaliculatus_F_contig10614:286..349 1622928717.60512-UTR-H-canaliculatus_F_contig10614:286..349 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 287..349 + 1696845537.5038426-UTR-H-canaliculatus_F_contig10614:286..349 1696845537.5038426-UTR-H-canaliculatus_F_contig10614:286..349 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 287..349 + 1622928717.7362242-UTR-H-canaliculatus_F_contig10614:3421..3426 1622928717.7362242-UTR-H-canaliculatus_F_contig10614:3421..3426 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 3422..3426 + 1696845537.5773337-UTR-H-canaliculatus_F_contig10614:3421..3426 1696845537.5773337-UTR-H-canaliculatus_F_contig10614:3421..3426 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 3422..3426 + 1622928717.7589967-UTR-H-canaliculatus_F_contig10614:3881..3988 1622928717.7589967-UTR-H-canaliculatus_F_contig10614:3881..3988 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 3882..3988 + 1696845537.5860972-UTR-H-canaliculatus_F_contig10614:3881..3988 1696845537.5860972-UTR-H-canaliculatus_F_contig10614:3881..3988 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 3882..3988 + 1622928717.7757587-UTR-H-canaliculatus_F_contig10614:4334..4733 1622928717.7757587-UTR-H-canaliculatus_F_contig10614:4334..4733 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 4335..4733 + 1696845537.5949614-UTR-H-canaliculatus_F_contig10614:4334..4733 1696845537.5949614-UTR-H-canaliculatus_F_contig10614:4334..4733 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig10614 4335..4733 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622928717.6227932-CDS-H-canaliculatus_F_contig10614:349..358 1622928717.6227932-CDS-H-canaliculatus_F_contig10614:349..358 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 350..358 + 1696845537.5157306-CDS-H-canaliculatus_F_contig10614:349..358 1696845537.5157306-CDS-H-canaliculatus_F_contig10614:349..358 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 350..358 + 1622928717.6362562-CDS-H-canaliculatus_F_contig10614:836..950 1622928717.6362562-CDS-H-canaliculatus_F_contig10614:836..950 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 837..950 + 1696845537.5259862-CDS-H-canaliculatus_F_contig10614:836..950 1696845537.5259862-CDS-H-canaliculatus_F_contig10614:836..950 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 837..950 + 1622928717.666233-CDS-H-canaliculatus_F_contig10614:1518..1667 1622928717.666233-CDS-H-canaliculatus_F_contig10614:1518..1667 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 1519..1667 + 1696845537.54221-CDS-H-canaliculatus_F_contig10614:1518..1667 1696845537.54221-CDS-H-canaliculatus_F_contig10614:1518..1667 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 1519..1667 + 1622928717.6862-CDS-H-canaliculatus_F_contig10614:1892..2027 1622928717.6862-CDS-H-canaliculatus_F_contig10614:1892..2027 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 1893..2027 + 1696845537.5514412-CDS-H-canaliculatus_F_contig10614:1892..2027 1696845537.5514412-CDS-H-canaliculatus_F_contig10614:1892..2027 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 1893..2027 + 1622928717.7023737-CDS-H-canaliculatus_F_contig10614:2419..2894 1622928717.7023737-CDS-H-canaliculatus_F_contig10614:2419..2894 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 2420..2894 + 1696845537.5595698-CDS-H-canaliculatus_F_contig10614:2419..2894 1696845537.5595698-CDS-H-canaliculatus_F_contig10614:2419..2894 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 2420..2894 + 1622928717.7178698-CDS-H-canaliculatus_F_contig10614:3187..3421 1622928717.7178698-CDS-H-canaliculatus_F_contig10614:3187..3421 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 3188..3421 + 1696845537.5682392-CDS-H-canaliculatus_F_contig10614:3187..3421 1696845537.5682392-CDS-H-canaliculatus_F_contig10614:3187..3421 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10614 3188..3421 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10614.600.1
>prot_H-canaliculatus_F_contig10614.600.1 ID=prot_H-canaliculatus_F_contig10614.600.1|Name=mRNA_H-canaliculatus_F_contig10614.600.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=372bp
MLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAP back to top mRNA from alignment at H-canaliculatus_F_contig10614:287..4733+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10614.600.1 ID=mRNA_H-canaliculatus_F_contig10614.600.1|Name=mRNA_H-canaliculatus_F_contig10614.600.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4447bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10614:287..4733+ (Hapterophycus canaliculatus Oshoro5f female)AGGAGCGTGTCCCCTCAGGCGTCGGACGTACCGGTCCTCCAGGAAGACTC
GGCGGAAGAGGTC ATGCTCAAG GTACCAAAAGCAGCCGCAGCCGCAGCCG
CAGCAGTATCAGAGCGGCGGCAGCAGCGAAGAAGTCTGTTGGCAATGGCA
GCGGGAATCCCGGCTATTTTGAGGGAGCTGATGGGCGGGAACGCTGTAGG
ACACAGGGCTAAGTGTCGTGAAGAGCTCTCCGTGCAACGACCCGGTCGGG
ACGCAAGCCGGCGGCGGCAACGGGGGCTAGAGTAGAGGCCAGATTGTGAC
GGGCGTGCATATCCCGACTGCTGCGGTGGACGGCCATGGTTTCCTCCAAT
CTTAAAAATTTCCCTTGAGCAGGCGTTTTTCTACACGGCTTTTCTCGCAG
CGAGTCGCATGTGCACCCGGAAATCTATCTACTGGTGTCCATCCGTTTTA
TGACCACCCCGCGACCTCATACCTTACCGAAATACTCCCCTCCCCCCTCC
CTCCTCCCCCCTCCCCGTCCTTCCCATCGAAAACGCCATGAACGACGCAG
GTGGCGGCGCATACTCACTACATGCCGGAGCACTGGCGGGGCAAGGCTCA
CACGGTGGAGGTCCGCACGGAGCTTCTGGGGCTGTTCCACTACAAGGCTC
AGCTGTTTCTCGAG GTGCCAAAGCCCCTGCCTTGTAGGCTCTCCACCAAA
AAGCATTTTTTTTTCCCCGCTGATTGTTCCAACGAACAGCGTTTTCGTTT
TCGGCGCGGCGTCACGACTTCCGTCCATACCGTGCAGTCAAGGGGAAAAA
ATACATTTATCCCCTATCCTGTCGTCTGTGCCCCCTCTTCTTCACCCCTT
CAGCCTTGCCAAGATCCCCGTCGTGTCTTCGATCCTACGCAAAAGGTGTC
TCGCCGTTGCCTCGTCGAACCCCTGATTGCCCCCGCCCCGCGCGCCTGCG
GCGGGGTGCTCGTTGAAAAATGCGAAACTTCCAAGCAAGCGCACACGCTC
TTTCTTCGCCCGCCTCCCCGTCTCTCCCCGACCCCTGGCCACCACCCACC
CCGCCACACCTCTCACCCGCTCGCCGGTGTTTCCCGTTGTCTTCCTCTCC
GCGATTTAGTGGGGGTGTTCCAGCCATCAGGGTTCACGCCATCAGCCTTC
ACGCCACCGCTGTCGCTATCACTGCCGCTAACGCCTTCTCTGTCGCCGCC
GCTGCTGTCGTCGTCGTTTTGGGTTGCCGTAGGAGCTTCTGGCGGTCCTG
TTCGCGCCCGTGATCCTGTGCTTCTCCATGCCGAGCTGCGCGCAGGAGAT
CGTGGACTTCGTGACGGAGCACACGGTGGATGTGGAGGGGGTCGGTTCGG
TGTGCAGCTACAGCCTCTTCGACTTCGGGAG GTGAAGCGCCTGCTCTTGC
TCGTTGTCGTCGCTATTTTTGGTTGTCGTTGTTGTTGTTGTTGTTGTTGC
TGTTGTTGTGACTCGACTCATGCGGACCCGGGCGTGGAGCGAAGTGCGCA
GACGAGCCGCAAGTCTTTCGAAACGCCGATGAGGTTTCCAGTCCGCGAAA
CCAGAAAAGTCCATGATTTCGTATCCCTTGGAAACCACCCGTGCACGAAC
ACCCAGGTACGGGGACGAGGACTACGCAGCCCCGTCGACGGCTTCGATGG
CGGAAGTCGGGAGGCGAGACGACAGCAGAGCTCGGCGACGGTCGGACACG
ACGGCACAGGGGAAGATGGAGAAGTCCTTCCTCAACTTCAG GTAGGTTGA
GCGTAGACCTACGACTCGCTCGCGCGCCTGCGCTTGCCGAGCGGGGACGA
GGGGCCCGAAAACGGTCTATAATAGATGGTGAGGTTGCTGTTTTGCTGAT
GACAGTGGCCCCTCCGTCATCAATTTGGTCATCGTCATCGGCGCCCTCGA
TACCCCCCCTGCTGCCGCCGCTGCCGCCGCTGCCGCTGCCGCTGCTGCCG
CCGCTGAGCTGCTGCGACCGTGTTTTCGTGTTGGGGCGCTTGATGGCCCT
CGACAGCCCGTGGAATCGAACGAACAAAGACGTTGATCCTCCATTCGTTT
TGTTCGTTCCTCGATATATTTCGCTCGTCGGTTTTTCGGTGTTGCCCCCC
CTCCCCCCCCCCGCCCCCCCCCCGCTCTCACAGGACGCACTACCCCGACT
GGCAGCCGGGACCCGCGGGCCAAGAAATGATCGATAGGCTGGCCGGGTTC
CAGCTGCAGTGCCTCCGGAAGGACGCCGAGATAGCGGCGGCAAACACGGC
GGCGGCGGTCGCGGCAGCGACGGCGGCGGCGGCCGCAGCGGCGGGGGCCG
CGGGGGCAACAGGCGGGGCGGCGACGCCGGTAGGAGGGGGGGGAGGCGGT
GGAGGAACAGGGTCGCATTGGGGGCAAAACCTCCACGGCAGCAGCGGGGG
CGCAAGGGGCCAAGGCTTGCAGTCAGGAGCGGGAGTCGGAGGAGCAGCGA
GAGGCGGCGGCGGCGGCTCGACCGCCGCCGCCACCGTCACCCCAGCGCTG
CGCCGCACAGGCCTCCTCGGAAACCTGGACCGCGATCAGGACGGCGCCGA
TTCCGACGAAAAAAATAAGGCCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGACGGC GTCGGCGGCCAAGACAGGGCCGGAGAACGGGTTTTCGCGACC
GACCACGACGACAAGACCTCCGACAAGGACGGCGGAGGTGCCAACGGCGA
CGGCGCCGACGACCATGAGCGGGGGAGCGATCATCACGCGTCCCCAGGAT
CGTTCCCTCCACTCTTCTCTCCCGAGCGCGACGGTTCGGCGGAAGGGGCG
GACCAAGCCAGCCTCGGCCCCCTCGGTGGCGGCGCGGGCGGCGGCGGATA
CACAGCCAGCGGCTACCACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGA
GAGCATCACCGTCCCCGGGCCTGACACCCTCGTCCCTCCAGCTTGGACTG
TTGAACTCGGTGTCCCCGTCTATGCTGCTGGGGCCTGGCGCGGGAGCGTG
GCTGGGCGCTACGGGGGGTGCCGGCGGCGGCGGAAACGGGGTGTTCGGGG
CGTCGATGGCCACTCCCTCGTTCGTCCAGACGTCGCAGCTTGCACCCTTC
CTCATGTCTCACATTGGCGGCCCGCATGGGAGTAG TTTCG GTGAGTGGGT
GGGGATGGGGGTGTTTGTGATGTTTGTGTTTGTGGTGTTTGTGTTTGTGG
TGTTTGTGGCTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGACAGG
GGGGTGGTATCGAGGCGTGTTTTAGGCAGACTGCTACTCTGTTTACGGGG
TCCGGCTGCTGGCTTGCGGCGGAACGGGTCAACGCCTTTTCGCATCCCGC
TGTGTTTTCCGAGTCGCCAGGTAGAGTAGGGCGTGGTGAGCGTGCACGTG
TGCTCTTGTCTAGGGCGATTCGAGTAATGTCGGTGTCGGAGAGATAACAG
GCATGAACGCGGACCGGTATAGATGGTGCACCCGTTTCCAAGCCGAAGAA
GGGGTGGTCGACGCACGTCGGCTCCGAGACAAACGTGCACTCAAGATGCA
AAAGGAATGAGCGCGTCTCCCTCCCCCTCTCCCGACAAACCACAGCAGGA
GCAGCAGGAGCCCCGTCGTTCTTGGGGCGAACGACTAGTAATGGCGCCCC
CGCCGCTGCTGGGCCCGTCGGGCAGGAGAACAACTTCTACTGGCTCGAGA
GG GTGAGCGCTTCTCCCCCCTCCCCCCCCGCCGAAAACGTGTTTTATGGC
TGCAGTTTGACGTGCTTGCTGGAGCTGAGCGGTTTCTCAACTACGGCGTT
GTCCTTTTGGAACGGCCCGGCGGCCTCTTCATCGTCTCCCGCCTTTTCAA
GTTTCCTGTTGGCTGCCTCTGGGCAAAAGGTTGAACCGAGCGCGCCGGGC
ATTACCCAAAGCCTCGTTCGTGACACGACCACTGTTGAATGCATCCACCG
TGCGTTCGAAGTCCTTGCGAGCTCTTCCCCTTTGCCATCCCTGCCGTCCA
AGCAACCAACGCACCACGTGTCCGACGGTTGCACCCAATCGCTGCCAGTT
TTACGCCGCCCACAGGAGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCC
TGTCCTTTGCCTCCGGAGTAGGAGGACTAGGGGCAGGAGCAGCAGGAGGA
GGAGACATCGGCGCAAGGGCGGCGGCAGCATCCACGGCCTCGTTGGCGGG
TTTGATGAGCCAAGGAGGCGGTGGCGGTGTTGGCGGTGGGGGGGGGGGTT
CGAGGTTTGCGGCGGCGGGAGGACCCGGGAGGGGAGGGGGTGTTGAGGGA
GGCATGCGTTCCTCCCTCCGCCCCCAGCATCCCAATCGTCACGGCCACGG
CGGGTTTTCCAGCGTAGGCGGGTCGGTTATCGCGGGGCGCAGGAGGAGGA
GCGGCGGTGGTAGTAGTGCGGTGGTAGAGGGGGGGGACGGGGGTGTC back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10614:287..4733+
>mRNA_H-canaliculatus_F_contig10614.600.1 ID=mRNA_H-canaliculatus_F_contig10614.600.1|Name=mRNA_H-canaliculatus_F_contig10614.600.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2232bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10614:287..4733+ (Hapterophycus canaliculatus Oshoro5f female) back to top