mRNA_H-canaliculatus_F_contig1060.586.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: D7FVN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN7_ECTSI) HSP 1 Score: 139 bits (349), Expect = 3.490e-36 Identity = 102/128 (79.69%), Postives = 112/128 (87.50%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEVGAHLSADWFARH 387
K+ PEEVF +FDTDGSGLIDFDEFR MLPQLGI+ITMPKALR+FR XXXXXXXXXXXXXXXVALFAVDPDSGNPVGF P+ALL+PLDAF XXXXXXXXXXXXXX FFLLQ+LGIE + F ++
Sbjct: 76 KKTPEEVFAQFDTDGSGLIDFDEFRTMLPQLGISITMPKALRFFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFTPSALLTPLDAFXXXXXXXXXXXXXXXXFFLLQFLGIETTEMKLEEMFKKY 203
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: A0A836CDL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL9_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.090e-31 Identity = 77/128 (60.16%), Postives = 93/128 (72.66%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEVGAHLSADWFARH 387
K PE +F FD D G IDF+EF+A+LPQLGI +++PKALRYFR XXXXXXXXXXXXXX+ALFAVDPD+GNPVGFAPN+LLSP+DAF+ FFFLLQ+LG+EV F ++
Sbjct: 37 KLPPEAIFAIFDKDNDGTIDFEEFKAILPQLGIEVSLPKALRYFRTCXXXXXXXXXXXXXXMALFAVDPDNGNPVGFAPNSLLSPMDAFDMFDTDKSGNIDEDEFFFLLQFLGVEVSEERLESLFKQY 164
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: A0A7S2FTK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FTK3_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.000e-26 Identity = 81/114 (71.05%), Postives = 96/114 (84.21%), Query Frame = 1
Query: 10 APEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEV 351
PEEVF FD DGSG ID EF+ MLP+LG+ ++ KAL+YF+M XXXXXXXXXXXXXXVAL+A DP+SGNP+GFAPN LL+P DAF XXXXXXXXXXXXXX FF+L+YL ++V
Sbjct: 8 TPEEVFMEFDVDGSGFIDLAEFKDMLPKLGVKMSSAKALKYFKMCXXXXXXXXXXXXXXVALYACDPNSGNPIGFAPNNLLTPKDAFXXXXXXXXXXXXXXXXFFVLEYLQLDV 121
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: F0YIW6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIW6_AURAN) HSP 1 Score: 103 bits (258), Expect = 6.820e-26 Identity = 67/126 (53.17%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 10 APEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEVGAHLSADWFARH 387
PE VF++FDTD SG I+ +EF+ ML +L IN++ KAL+YF+M XXXXXXXXXXXXXX ALFA DP+ GNP+GF+PNALL P DAFE FFF+L+YL ++V F ++
Sbjct: 2 TPEAVFEKFDTDNSGRINLEEFKIMLGKLKINMSSAKALKYFKMCXXXXXXXXXXXXXXXALFACDPNGGNPIGFSPNALLMPQDAFEMFDEDGTGTINEDEFFFVLEYLKLDVSDQKQEQMFLKY 127
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: A0A8J2SRF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRF7_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.810e-24 Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEV 351
K PEEVFKRFDTDGSG ID +EF+ ML +L I+++ KA++Y XXXXXXXXXXXXXXX ALFA DP++GNP+GFAPNALL+P+DAFE F+F+L+YL +EV
Sbjct: 79 KMPPEEVFKRFDTDGSGEIDLEEFKVMLKKLKIHMSSAKAVKYXXXXXXXXXXXXXXXXXXXALFACDPNNGNPIGFAPNALLTPIDAFEMFDEDGSGNINEDEFYFVLEYLKLEV 194
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: D0NE77_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NE77_PHYIT) HSP 1 Score: 95.5 bits (236), Expect = 2.340e-20 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEVGAHLSADWFARH 387
K +PEE+FK++DTDGSG I EF AMLP LGI+I+ KA+R XXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAFE F +L+Y G++V F ++
Sbjct: 87 KLSPEELFKKYDTDGSGNISASEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDVSDEKQEKIFRKY 214
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: G4Z5G0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z5G0_PHYSP) HSP 1 Score: 95.5 bits (236), Expect = 2.410e-20 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEVGAHLSADWFARH 387
K +PEE+FK++DTDGSG I EF AMLP LGI+I+ KA+R XXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAFE F +L+Y G++V F ++
Sbjct: 89 KLSPEELFKKYDTDGSGNISASEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDVSDEKQEKIFRKY 216
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: A0A8J5JEG2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JEG2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.690e-20 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEVGAHLSADWFARH 387
K +PEE+FK++DTDGSG I EF AMLP LGI+I+ KA+R XXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAFE F +L+Y G++V F ++
Sbjct: 87 KLSPEELFKKYDTDGSGNISASEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDVSDEKQEKIFKQY 214
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: A0A329T505_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T505_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.730e-20 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEVGAHLSADWFARH 387
K +PEE+FK++DTDGSG I EF AMLP LGI+I+ KA+R XXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAFE F +L+Y G++V F ++
Sbjct: 87 KLSPEELFKKYDTDGSGNISASEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDVSDEKQEKIFKQY 214
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Match: A0A2P4XZ17_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZ17_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 6.310e-20 Identity = 64/116 (55.17%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 4 KRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFEXXXXXXXXXXXXXXFFFLLQYLGIEV 351
K PEE+FK++DTDGSG I EF AMLP LGI+I+ KA+R XXXXXXXXXXXXXX +A+FAVDP SGN GF+P+ LL P DAFE F +L+Y G++V
Sbjct: 87 KLPPEELFKKYDTDGSGNISVSEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNTFGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDV 202 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1060.586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1060.586.1 >prot_H-canaliculatus_F_contig1060.586.1 ID=prot_H-canaliculatus_F_contig1060.586.1|Name=mRNA_H-canaliculatus_F_contig1060.586.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=131bp MKRAPEEVFKRFDTDGSGLIDFDEFRAMLPQLGINITMPKALRYFRMSDPback to top mRNA from alignment at H-canaliculatus_F_contig1060:14995..16518- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1060.586.1 ID=mRNA_H-canaliculatus_F_contig1060.586.1|Name=mRNA_H-canaliculatus_F_contig1060.586.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1524bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1060:14995..16518- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1060:14995..16518- >mRNA_H-canaliculatus_F_contig1060.586.1 ID=mRNA_H-canaliculatus_F_contig1060.586.1|Name=mRNA_H-canaliculatus_F_contig1060.586.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=786bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1060:14995..16518- (Hapterophycus canaliculatus Oshoro5f female)back to top |