mRNA_H-canaliculatus_F_contig1054.522.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: D8LIS7_ECTSI (Arginine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS7_ECTSI) HSP 1 Score: 298 bits (763), Expect = 5.360e-91 Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 1
Query: 1 QSDEEELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
Q+DE ELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKA EGLG LSGTEI SMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDY+FELSS+FNRFYENCPVN ETEE K SRTA CSGTADVI+ GLGLLG+GTLDRL
Sbjct: 450 QADEVELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEI-SMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNTGETEEFKGSRTAFCSGTADVIERGLGLLGMGTLDRL 616
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A6H5K233_9PHAE (Arginine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K233_9PHAE) HSP 1 Score: 268 bits (686), Expect = 9.500e-86 Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 1
Query: 76 MNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
MNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKA EGLG LSGTEI SMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDY+FELSS+FNRFYENCPVN AETEELKRSRTALCSGTADVI+LGLGLLGIGTLDRL
Sbjct: 1 MNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKATEGLGDLSGTEI-SMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYMFELSSQFNRFYENCPVNTAETEELKRSRTALCSGTADVIELGLGLLGIGTLDRL 142
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A7S3XT34_HETAK (Arginine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT34_HETAK) HSP 1 Score: 218 bits (554), Expect = 2.060e-61 Identity = 107/163 (65.64%), Postives = 133/163 (81.60%), Query Frame = 1
Query: 16 ELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
E +K VG+GAVKYADLS+NRESNYRFSYAKML+LQGNTAPYMLYA+ RV+GI++KA EGL + +II + P+E +LA+ LL+ PE++E++E DL+P++LC+YLFELS FNRFYE CPVN AET+ LKRSRTALC TA VI GLGLLGI T++RL
Sbjct: 343 EARAAAKAVGLGAVKYADLSLNRESNYRFSYAKMLALQGNTAPYMLYAYVRVKGIQRKALEGLDASADADII-LQEPQELSLAKKLLKFPEIVEEVEADLYPNKLCEYLFELSQAFNRFYEACPVNTAETDALKRSRTALCGVTAGVIAKGLGLLGIDTVERL 504
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A6V1Q9W7_HETAK (Arginine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q9W7_HETAK) HSP 1 Score: 218 bits (554), Expect = 4.250e-60 Identity = 107/163 (65.64%), Postives = 133/163 (81.60%), Query Frame = 1
Query: 16 ELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
E +K VG+GAVKYADLS+NRESNYRFSYAKML+LQGNTAPYMLYA+ RV+GI++KA EGL + +II + P+E +LA+ LL+ PE++E++E DL+P++LC+YLFELS FNRFYE CPVN AET+ LKRSRTALC TA VI GLGLLGI T++RL
Sbjct: 495 EARAAAKAVGLGAVKYADLSLNRESNYRFSYAKMLALQGNTAPYMLYAYVRVKGIQRKALEGLDASADADII-LQEPQELSLAKKLLKFPEIVEEVEADLYPNKLCEYLFELSQAFNRFYEACPVNTAETDALKRSRTALCGVTAGVIAKGLGLLGIDTVERL 656
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A7S2Y2C9_9STRA (Arginine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2C9_9STRA) HSP 1 Score: 216 bits (551), Expect = 6.280e-59 Identity = 109/164 (66.46%), Postives = 136/164 (82.93%), Query Frame = 1
Query: 16 ELERVS-KVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
E ER++ +VVG+GAVKYADLSMNRES+YRFSY KMLSL GNTAPYMLYA+ RV+GI++K AE +G +G +I+ + E LAR LLRLPEVL +LE DL+PH+LC+YLF++S +FN+FYE+CPVN AETEELKRSR ALC TA+VI+ GL LLGI T+D+L
Sbjct: 609 EAERLAAQVVGLGAVKYADLSMNRESDYRFSYKKMLSLTGNTAPYMLYAYVRVKGIQRKGAEAVGDFTGGDIV-LQEESEINLARKLLRLPEVLAELESDLYPHKLCEYLFDVSQKFNKFYESCPVNTAETEELKRSRVALCEVTANVIKKGLSLLGIDTVDKL 771
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A7S4LZN2_GUITH (Arginine--tRNA ligase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4LZN2_GUITH) HSP 1 Score: 202 bits (513), Expect = 3.660e-57 Identity = 103/164 (62.80%), Postives = 127/164 (77.44%), Query Frame = 1
Query: 13 EELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
EE ER +++VG+ AVKYADLSMNRESNYRFSY KML+L GNTAPYMLYAFAR+ GI++K + S +II + P E LAR L+ LPE+L D+E L+PHRLC+Y+FELS RFN+FYENCPV A +EE K+SR ALCS TA+ +QL L LLGI T++RL
Sbjct: 181 EETERTARIVGLAAVKYADLSMNRESNYRFSYDKMLALSGNTAPYMLYAFARINGIRRKIGSEIKLDSSCKII-LDHPAEMFLARHLVYLPELLLDVEKSLYPHRLCEYIFELSQRFNQFYENCPVANAPSEEEKKSRLALCSATANTLQLVLNLLGIDTVERL 343
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A7S2DLK4_9STRA (Arginine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLK4_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.560e-57 Identity = 100/159 (62.89%), Postives = 126/159 (79.25%), Query Frame = 1
Query: 28 VSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
++K +GIGAVKYADLS+NRESNYRFSY KML+L GNTAPYMLYA+AR+QGI+++++E L I + E ALAR LLR PEVL+ LE DL+P++LCD+LFE S +FN+FYENCPV AET+EL+ SRTALC+ TA ++Q L LLGIG +DRL
Sbjct: 193 LAKTIGIGAVKYADLSLNRESNYRFSYNKMLALNGNTAPYMLYAYARIQGIRRRSSESLDVDITDAPIILEHDAERALARQLLRFPEVLQRLERDLYPNQLCDFLFETSQKFNQFYENCPVINAETDELRASRTALCATTAQLLQKSLELLGIGVVDRL 351
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A835ZBM0_9STRA (Arginine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM0_9STRA) HSP 1 Score: 206 bits (524), Expect = 5.910e-56 Identity = 106/165 (64.24%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 13 EELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLG-GLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
EE V++ VG+GAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYM+YA+AR+QGI+++A S I + P E LAR LLRLPEVL +LE DL+P+RLC+YLF+LS RFN+FYE CPVN A T+EL+ SR ALCS TA I+L LGLLGI +++L
Sbjct: 472 EEERAVARKVGLGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMMYAYARIQGIRRRATTSTPISTSDPPRIVLEHPAELTLARTLLRLPEVLTELERDLYPNRLCEYLFDLSQRFNQFYEGCPVNAAATDELRASRVALCSVTAATIKLSLGLLGIDVVEKL 636
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: L1JPT8_GUITC (Arginine--tRNA ligase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JPT8_GUITC) HSP 1 Score: 203 bits (517), Expect = 7.230e-55 Identity = 103/168 (61.31%), Postives = 130/168 (77.38%), Query Frame = 1
Query: 1 QSDEEELERVSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
++D +E ER +++VG+ AVKYADLSMNRESNYRFSY KML+L GNTAPYMLYAFAR+ GI++K + S +II + P E LAR L+ LPE+L D+E L+PHRLC+Y+FELS RFN+FYENCPV A +EE K+SR ALCS TA+ +QL L LLGI T++RL
Sbjct: 483 EADNKETERTARIVGLAAVKYADLSMNRESNYRFSYDKMLALSGNTAPYMLYAFARINGIRRKIGSEIKLDSSCKII-LDHPAEMFLARHLVYLPELLLDVEKSLYPHRLCEYIFELSQRFNQFYENCPVANAPSEEEKKSRLALCSATANTLQLVLNLLGIDTVERL 649
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Match: A0A7S2DLN2_9STRA (Arginine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLN2_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.720e-54 Identity = 100/159 (62.89%), Postives = 126/159 (79.25%), Query Frame = 1
Query: 28 VSKVVGIGAVKYADLSMNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEIISMGTPEEAALARMLLRLPEVLEDLEVDLFPHRLCDYLFELSSRFNRFYENCPVNRAETEELKRSRTALCSGTADVIQLGLGLLGIGTLDRL 504
++K +GIGAVKYADLS+NRESNYRFSY KML+L GNTAPYMLYA+AR+QGI+++++E L I + E ALAR LLR PEVL+ LE DL+P++LCD+LFE S +FN+FYENCPV AET+EL+ SRTALC+ TA ++Q L LLGIG +DRL
Sbjct: 492 LAKTIGIGAVKYADLSLNRESNYRFSYNKMLALNGNTAPYMLYAYARIQGIRRRSSESLDVDITDAPIILEHDAERALARQLLRFPEVLQRLERDLYPNQLCDFLFETSQKFNQFYENCPVINAETDELRASRTALCATTAQLLQKSLELLGIGVVDRL 650 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1054.522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1054.522.1 >prot_H-canaliculatus_F_contig1054.522.1 ID=prot_H-canaliculatus_F_contig1054.522.1|Name=mRNA_H-canaliculatus_F_contig1054.522.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=144bp MNRESNYRFSYAKMLSLQGNTAPYMLYAFARVQGIKKKAAEGLGGLSGTEback to top mRNA from alignment at H-canaliculatus_F_contig1054:7013..9331+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1054.522.1 ID=mRNA_H-canaliculatus_F_contig1054.522.1|Name=mRNA_H-canaliculatus_F_contig1054.522.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2319bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1054:7013..9331+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1054:7013..9331+ >mRNA_H-canaliculatus_F_contig1054.522.1 ID=mRNA_H-canaliculatus_F_contig1054.522.1|Name=mRNA_H-canaliculatus_F_contig1054.522.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=864bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1054:7013..9331+ (Hapterophycus canaliculatus Oshoro5f female)back to top |