Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 272 |
Cds size | 270 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928705.8925414-CDS-H-canaliculatus_F_contig1054:3113..3284 | 1622928705.8925414-CDS-H-canaliculatus_F_contig1054:3113..3284 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1054 3114..3284 + |
1696845532.0519269-CDS-H-canaliculatus_F_contig1054:3113..3284 | 1696845532.0519269-CDS-H-canaliculatus_F_contig1054:3113..3284 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1054 3114..3284 + |
1622928705.905376-CDS-H-canaliculatus_F_contig1054:3738..3837 | 1622928705.905376-CDS-H-canaliculatus_F_contig1054:3738..3837 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1054 3739..3837 + |
1696845532.0665739-CDS-H-canaliculatus_F_contig1054:3738..3837 | 1696845532.0665739-CDS-H-canaliculatus_F_contig1054:3738..3837 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1054 3739..3837 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1054.521.1 >prot_H-canaliculatus_F_contig1054.521.1 ID=prot_H-canaliculatus_F_contig1054.521.1|Name=mRNA_H-canaliculatus_F_contig1054.521.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=90bp
GRSRRHSAGGGGGDGNRAMGHGSGGGGQGFGGRPARSSMDGPGAPQGRGS AGGWGGNVGMHRHNMQMQHQNRHHLAPTVPGGGGGQHPGF back to topmRNA from alignment at H-canaliculatus_F_contig1054:3114..3838+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1054.521.1 ID=mRNA_H-canaliculatus_F_contig1054.521.1|Name=mRNA_H-canaliculatus_F_contig1054.521.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=725bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1054:3114..3838+ (Hapterophycus canaliculatus Oshoro5f female) GGGAGGTCAAGGAGGCATAGCGCCGGTGGCGGCGGCGGCGACGGCAACCG
AGCGATGGGCCATGGTAGCGGTGGCGGCGGGCAGGGCTTCGGCGGCCGGC
CCGCTAGGTCGTCTATGGACGGCCCGGGGGCGCCCCAAGGGCGGGGCAGC
GCCGGCGGGTGGGGCGGAAACGTGCGTACACGTACAGACGGGTCTCCTTT
GCTGCTGCTGCTGGTGCTGCTGCTGCTTGTGCAACTCGGCCGCCTCTCGA
TCTTGTCTACTTTATTACCAGGCCAACAAGGGCCAGGGGTGTTTGATCTC
CGAAGCGCGCCGCACTCTGCTGTTGTGTTCGCGTGAGATGAAAGCCGCAA
GGGGTCGCAGACATTGCTTGTGGGGGAAGACCGGTGATCCATCTTTTGCC
GAAGCGCCTGTGCCAATGGCCTGTTTTCCCTGGCCGGGGGAGGAGTGCCA
TTTTCCCTGGACGGCGCTCGCGCATCTTTTACTCGCGTCCTTACCGCTCT
CTCCATCTATCTCTCTCTTTCTTTCTCTCTCTCTCTCCCTCTCTCTCGCT
CCCTCTCTCTCTCTCTCCCTCTCCTTTTCTCGATGCGCGTCCTCCTCCTT
CCTTGCACCACCATCGCCACAACAGGTCGGCATGCACCGCCACAACATGC
AGATGCAGCACCAGAACCGCCATCACCTCGCCCCCACCGTCCCCGGCGGC
GGCGGCGGACAGCACCCTGGCTTCC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1054:3114..3838+ >mRNA_H-canaliculatus_F_contig1054.521.1 ID=mRNA_H-canaliculatus_F_contig1054.521.1|Name=mRNA_H-canaliculatus_F_contig1054.521.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=540bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1054:3114..3838+ (Hapterophycus canaliculatus Oshoro5f female) GGGAGGTCAAGGAGGCATAGCGCCGGTGGCGGCGGCGGCGACGGCAACCG AGCGATGGGCCATGGTAGCGGTGGCGGCGGGCAGGGCTTCGGCGGCCGGC CCGCTAGGTCGTCTATGGACGGCCCGGGGGCGCCCCAAGGGCGGGGCAGC GCCGGCGGGTGGGGCGGAAACGGGAGGTCAAGGAGGCATAGCGCCGGTGG CGGCGGCGGCGACGGCAACCGAGCGATGGGCCATGGTAGCGGTGGCGGCG GGCAGGGCTTCGGCGGCCGGCCCGCTAGGTCGTCTATGGACGGCCCGGGG GCGCCCCAAGGGCGGGGCAGCGCCGGCGGGTGGGGCGGAAACGTCGGCAT GCACCGCCACAACATGCAGATGCAGCACCAGAACCGCCATCACCTCGCCC CCACCGTCCCCGGCGGCGGCGGCGGACAGCACCCTGGCTTCGTCGGCATG CACCGCCACAACATGCAGATGCAGCACCAGAACCGCCATCACCTCGCCCC CACCGTCCCCGGCGGCGGCGGCGGACAGCACCCTGGCTTC back to top
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