mRNA_H-canaliculatus_F_contig10518.503.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A6H5KUV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV6_9PHAE) HSP 1 Score: 130 bits (326), Expect = 2.980e-31 Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 3
Query: 444 GPKILKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACVCDLRGRVGAFRSCVAMIFGRQGV 728
G I KESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLL ASLTDWLDGYIARKW Q G + L +V + VA+ G+QG+
Sbjct: 142 GSMIKKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMV--TTVALALGQQGI 234
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: D7FT37_ECTSI (CDP-alcohol phosphatidyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT37_ECTSI) HSP 1 Score: 125 bits (315), Expect = 7.310e-31 Identity = 64/92 (69.57%), Postives = 71/92 (77.17%), Query Frame = 3
Query: 453 ILKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACVCDLRGRVGAFRSCVAMIFGRQGV 728
+ KESDRVWTVPNMITMGRIAFCPVLA LIVTSQHELALAGLL ASLTDWLDGYIARKW Q G + L +V + VA+ G+QG+
Sbjct: 2 VEKESDRVWTVPNMITMGRIAFCPVLASLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMV--TTVALALGQQGI 91
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A0J0XYP7_9TREE (Uncharacterized protein n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XYP7_9TREE) HSP 1 Score: 74.7 bits (182), Expect = 6.650e-12 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 3
Query: 405 SEHPGKEGEEDQTGPKILKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACV 659
SE PGK+ E+ + L ES +T+PN +T+ RIA CP LA IV E+A A L+ + LTDWLDGY+ARKWNQK G+ +
Sbjct: 42 SEKPGKKNEQVE-----LHESP--YTLPNALTIARIAACPFLAWSIVKGDFEVATAILVTSGLTDWLDGYLARKWNQKTVLGSII 119
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A1X7NQ11_9MICO (CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase n=6 Tax=Rathayibacter TaxID=33886 RepID=A0A1X7NQ11_9MICO) HSP 1 Score: 68.9 bits (167), Expect = 3.420e-10 Identity = 33/87 (37.93%), Postives = 53/87 (60.92%), Query Frame = 3
Query: 453 ILKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACVCDLRGRVGAFRSCVAMIF 713
+ DR+WTVPN+++M R+A PV LI+ + LAL L+ +SLTD+LDG+IAR+++Q G + R+ F + + + F
Sbjct: 2 VRAAEDRIWTVPNILSMVRLALVPVFLVLIIRGEDALALVTLVVSSLTDYLDGWIARRFDQMTRLGRVLDPAADRLYIFATVIGLAF 88
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A2U1IV28_SMIAN (Uncharacterized protein n=2 Tax=Smittium angustum TaxID=133377 RepID=A0A2U1IV28_SMIAN) HSP 1 Score: 68.9 bits (167), Expect = 7.850e-10 Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 3
Query: 453 ILKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACV 659
+L+ ++++T+PN+ITMGRI P L LI+ Q+ LAL+G + +LTD LDGY+ARK+N G+ +
Sbjct: 61 VLENHEKIFTIPNIITMGRIVGSPFLGYLIIQQQYSLALSGCILFALTDALDGYLARKYNLMTTVGSII 129
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A410YFY8_9MICO (CDP-alcohol phosphatidyltransferase family protein n=7 Tax=Salinibacterium TaxID=235888 RepID=A0A410YFY8_9MICO) HSP 1 Score: 67.0 bits (162), Expect = 1.340e-9 Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 3
Query: 465 SDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACVCDLRGRVGAFRSCVAM 707
SDRVWTVPN+++ R+ PV LI+++Q LAL L+ +SL+D+LDG+IAR++NQ G + R+ F + + +
Sbjct: 10 SDRVWTVPNILSFIRLGLVPVFLYLIISAQDALALIVLVFSSLSDYLDGFIARRFNQMTRLGQLLDPAADRLFIFAALIGL 90
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A160KRZ2_9MICO (CDP-alcohol phosphatidyltransferase family protein n=18 Tax=Rathayibacter TaxID=33886 RepID=A0A160KRZ2_9MICO) HSP 1 Score: 67.0 bits (162), Expect = 1.640e-9 Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 3
Query: 468 DRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACVCDLRGRVGAFRSCVAM 707
DR+WTVPN++++ R+A PV L+V+ + LAL L+ +SLTD+LDG+IAR+++Q G + R+ F + V +
Sbjct: 7 DRIWTVPNVLSLVRLALVPVFLVLVVSGEDALALLALVVSSLTDYLDGWIARRFDQMTRLGRVLDPAADRLYIFATVVGL 86
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A0Q5B075_9MICO (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=6 Tax=Rathayibacter TaxID=33886 RepID=A0A0Q5B075_9MICO) HSP 1 Score: 67.0 bits (162), Expect = 1.640e-9 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 3
Query: 468 DRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACVCDLRGRVGAFRSCVAMIF 713
DR+WTVPN+++M R+A PV L++ + LAL L+ +SLTD+LDG+IAR+++Q G + R+ F + + + F
Sbjct: 7 DRIWTVPNVLSMVRLALVPVFLVLVIEGEDALALLTLVVSSLTDYLDGWIARRFDQMTRLGRILDPAADRLYIFATVLGLAF 88
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A3N1MP38_9MICO (CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase n=12 Tax=Rathayibacter TaxID=33886 RepID=A0A3N1MP38_9MICO) HSP 1 Score: 67.0 bits (162), Expect = 1.640e-9 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 3
Query: 468 DRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACVCDLRGRVGAFRSCVAM 707
DR+WTVPN+++M R+A PV LI+ + LAL L+ +SLTD+LDG+IAR+++Q GA + R+ F + + +
Sbjct: 7 DRIWTVPNILSMVRLALVPVFLVLIIEGEDALALLTLVLSSLTDYLDGWIARRFDQITRLGAVLDPAADRLYIFATVIGL 86
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Match: A0A2T9YP74_9FUNG (Uncharacterized protein n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9YP74_9FUNG) HSP 1 Score: 69.3 bits (168), Expect = 1.700e-9 Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 3
Query: 429 EEDQTGPKILKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVADGACV 659
E+D +L+ ++++T+PN+ITMGRI P L LI+ Q+ LAL+G + +LTD LDGY+ARK+N G+ +
Sbjct: 285 EKDIAKSPVLENHEKIFTIPNIITMGRIVGSPFLGYLIIQQQYSLALSGCILFALTDALDGYLARKYNLMTTVGSII 361 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10518.503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10518.503.1 >prot_H-canaliculatus_F_contig10518.503.1 ID=prot_H-canaliculatus_F_contig10518.503.1|Name=mRNA_H-canaliculatus_F_contig10518.503.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=124bp MITMGRIAFCPVLAGLIVTSQHELALAGLLGASLTDWLDGYIARKWNQKVback to top mRNA from alignment at H-canaliculatus_F_contig10518:2024..4202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10518.503.1 ID=mRNA_H-canaliculatus_F_contig10518.503.1|Name=mRNA_H-canaliculatus_F_contig10518.503.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2179bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10518:2024..4202+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10518:2024..4202+ >mRNA_H-canaliculatus_F_contig10518.503.1 ID=mRNA_H-canaliculatus_F_contig10518.503.1|Name=mRNA_H-canaliculatus_F_contig10518.503.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=744bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10518:2024..4202+ (Hapterophycus canaliculatus Oshoro5f female)back to top |