mRNA_H-canaliculatus_F_contig10500.490.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10500.490.1
Unique NamemRNA_H-canaliculatus_F_contig10500.490.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: D7FT14_ECTSI (Putative AAA family ATP ase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT14_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 2.410e-120
Identity = 184/190 (96.84%), Postives = 189/190 (99.47%), Query Frame = 1 
Query:  310 ELPEELQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            ELPEELQHL+KAMV+KI+QEVQQ+GDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLF+VA YHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV
Sbjct:  209 ELPEELQHLEKAMVDKILQEVQQKGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFAVAGYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 398
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: A0A6H5JMF7_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF7_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 4.130e-117
Identity = 184/190 (96.84%), Postives = 189/190 (99.47%), Query Frame = 1 
Query:  310 ELPEELQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            ELPEELQHL+KAMV+KI+QEVQQ+GDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLF+VA YHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV
Sbjct:  479 ELPEELQHLEKAMVDKILQEVQQKGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFAVAGYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 668
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: A0A835YR71_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR71_9STRA)

HSP 1 Score: 301 bits (772), Expect = 4.880e-99
Identity = 149/178 (83.71%), Postives = 166/178 (93.26%), Query Frame = 1 
Query:  346 MVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            M+E+I +E+ Q GDPVTF+ IAGLE AK+ V+ELVCWPM+RP+IFTGLRSLPKGLLLFGPPGTGKTLIGKAIAH+SGATFFSISASSL SKWIGEGEK+VR LF+VA+Y QP+VIFIDEVDSML  RS+DENEASRRLKTEFL+QLDGAGTK+ DRVLVVGATNRPQELDEAARRRFV
Sbjct:    1 MIERITKEIMQIGDPVTFEDIAGLEGAKRLVVELVCWPMQRPEIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHESGATFFSISASSLMSKWIGEGEKLVRALFAVAAYRQPSVIFIDEVDSMLCQRSSDENEASRRLKTEFLVQLDGAGTKSTDRVLVVGATNRPQELDEAARRRFV 178
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: B7G2N8_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2N8_PHATC)

HSP 1 Score: 290 bits (743), Expect = 1.680e-94
Identity = 140/190 (73.68%), Postives = 165/190 (86.84%), Query Frame = 1 
Query:  310 ELPEELQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            ELPEEL+   K +VEKI  E+   GDPVTFD IAGL  AK+++ E++CWPM+RPD+FTGLR  P GLLL+GPPGTGKTLIGKAIAH+SGATFFSIS+SSL SKWIGEGEK+VRT+F+VA+Y +PAV+FIDE+DS+L+ R ADENEASRR+KTEFL+QLDG GT    RVLV+GATNRPQELDEAARRRFV
Sbjct:    3 ELPEELKRFGKDLVEKIENEIMDAGDPVTFDDIAGLLDAKQTIQEVICWPMKRPDLFTGLRRAPNGLLLYGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVRTMFAVAAYREPAVVFIDEIDSLLTQRKADENEASRRIKTEFLVQLDGTGTSGQGRVLVIGATNRPQELDEAARRRFV 192
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: A0A421FDV3_9STRA (AAA domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A421FDV3_9STRA)

HSP 1 Score: 291 bits (745), Expect = 2.860e-94
Identity = 146/185 (78.92%), Postives = 165/185 (89.19%), Query Frame = 1 
Query:  325 LQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            L+  D  ++EKI  E+   GDPVTFD IAGL+FAKK V ELV WPM RPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIA+QSGATFFSISASSL SKWIG+GEK+VRTLF+VA+  QP+VIFIDE+DS+L+ RS++ENEASRR+KTEFL+QLDGAGTKA D +LVVGATNRPQELDEAARRRFV
Sbjct:   39 LKSCDPELIEKIEMEIVDNGDPVTFDDIAGLQFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIANQSGATFFSISASSLTSKWIGQGEKLVRTLFAVAAVKQPSVIFIDEIDSLLTQRSSEENEASRRMKTEFLVQLDGAGTKAKDIILVVGATNRPQELDEAARRRFV 223
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: K3X2J1_GLOUD (AAA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2J1_GLOUD)

HSP 1 Score: 286 bits (732), Expect = 2.120e-92
Identity = 143/185 (77.30%), Postives = 163/185 (88.11%), Query Frame = 1 
Query:  325 LQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            L+  D  ++ KI  E+   GDP+ FD IAGL+FAKK V ELV WPM RPDIFTGLR+LPKGLLLFGPPGTGKTLIGKAIA+QSGATFFSISASSL SKWIGEGEK+VRTLF+VA+  QP+VIFIDE+DS+L+ RS++ENEASRR+KTEFL+QLDGAGTKA D +LVVGATNRPQELDEAARRRFV
Sbjct:   32 LRSCDPELIAKIEMEIVDNGDPIAFDDIAGLKFAKKCVNELVIWPMARPDIFTGLRALPKGLLLFGPPGTGKTLIGKAIANQSGATFFSISASSLTSKWIGEGEKLVRTLFAVAAVKQPSVIFIDEIDSLLTQRSSEENEASRRMKTEFLVQLDGAGTKAKDVILVVGATNRPQELDEAARRRFV 216
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: A0A7S4S3S4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S3S4_9STRA)

HSP 1 Score: 286 bits (732), Expect = 6.590e-92
Identity = 139/190 (73.16%), Postives = 164/190 (86.32%), Query Frame = 1 
Query:  310 ELPEELQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            ELPE L+ LDK ++EKI  E+   G+ +TF  IAGL  AK++V+ELVCWPM+RPD+FTGLR  P GLLLFGPPGTGKTLIGKAIAH+SGATFFSIS+SSL SKWIGEGEK+VRTLF+VA+Y +PAV+FIDE+DS+L+ R ADENEASRR+KTEFL+QLDG GT    RVLV+GATNRP ELD+AARRRFV
Sbjct:   43 ELPEALRGLDKELIEKIQNEIVDSGESITFHDIAGLADAKQTVLELVCWPMKRPDLFTGLRRGPNGLLLFGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVRTLFAVAAYREPAVVFIDEIDSLLTQRKADENEASRRIKTEFLVQLDGTGTSGRGRVLVIGATNRPHELDDAARRRFV 232
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: B8C5U9_THAPS (AAA domain protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U9_THAPS)

HSP 1 Score: 284 bits (726), Expect = 7.170e-92
Identity = 143/191 (74.87%), Postives = 166/191 (86.91%), Query Frame = 1 
Query:  310 ELPEELQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADR-VLVVGATNRPQELDEAARRRFV 879
            ELP+EL+ LDK ++EKI  E+   G+ VTFD IAGL+ AK +V E+V WPM+RP++FTGLR+ PKGLLLFGPPGTGKTLIGKAIAH+SGATFFSIS+SSL SKWIGEGEKMVRTLF+VA Y  PAV+FIDEVDSML+ R ADENEASRR+KTEFL+QLDGAG  +  + VLVVGATNRPQELD+AARRRFV
Sbjct:    3 ELPDELRGLDKDLIEKIENEIVDSGERVTFDDIAGLQNAKSTVFEMVVWPMQRPEMFTGLRATPKGLLLFGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKMVRTLFAVARYRSPAVVFIDEVDSMLTARKADENEASRRIKTEFLVQLDGAGNSSEGKQVLVVGATNRPQELDDAARRRFV 193
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: A0A7S0XLJ9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XLJ9_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.680e-91
Identity = 136/184 (73.91%), Postives = 163/184 (88.59%), Query Frame = 1 
Query:  328 QHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            QHLDK +V+KI  E+ + GD VTFD IAGLE AKK+V E+VCWPM+RPD+FTGLR  P GLLL+GPPGTGKTLIGKAIAH+SGATFFSIS+SSL SKWIGEGEK+V+TLF+VA+Y++PAVIF+DE+DS+L+ R + ENEASRR+KTEFL+QLDG GT    RVL++GATNRPQELDEAARRRF+
Sbjct:  102 QHLDKELVKKIQNEIMESGDTVTFDDIAGLEDAKKTVREVVCWPMQRPDLFTGLRRAPNGLLLYGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVKTLFAVAAYNEPAVIFLDEIDSLLTQRKSTENEASRRIKTEFLVQLDGCGTSGQGRVLIIGATNRPQELDEAARRRFI 285
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BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Match: A0A7S4K4U2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4U2_9STRA)

HSP 1 Score: 285 bits (730), Expect = 5.370e-91
Identity = 142/189 (75.13%), Postives = 163/189 (86.24%), Query Frame = 1 
Query:  313 LPEELQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEASRRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFV 879
            LPEEL+ LDK ++EKI  E+   G+PVTFD IAGL  AK++V+ELVCWPM+RPD+FTGLR  P GLLLFGPPGTGKTLIGKAIAH+SGATFFSIS+SSL SKWIGEGEK+VRTLF VA Y +P+V+FIDE+DS+L+ R ADENEASRR+KTEFL+QLDG GT    RVL VGATNRP ELDEAARRRFV
Sbjct:   92 LPEELKGLDKELIEKIQNEIVDGGEPVTFDDIAGLADAKQTVLELVCWPMKRPDLFTGLRRGPNGLLLFGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVRTLFKVAQYREPSVVFIDEIDSLLTQRKADENEASRRIKTEFLVQLDGTGT-GEGRVLCVGATNRPNELDEAARRRFV 279
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10500.490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT14_ECTSI2.410e-12096.84Putative AAA family ATP ase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JMF7_9PHAE4.130e-11796.84AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YR71_9STRA4.880e-9983.71P-loop containing nucleoside triphosphate hydrolas... [more]
B7G2N8_PHATC1.680e-9473.68Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A421FDV3_9STRA2.860e-9478.92AAA domain-containing protein n=4 Tax=Phytophthora... [more]
K3X2J1_GLOUD2.120e-9277.30AAA domain-containing protein n=1 Tax=Globisporang... [more]
A0A7S4S3S4_9STRA6.590e-9273.16Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8C5U9_THAPS7.170e-9274.87AAA domain protein (Fragment) n=1 Tax=Thalassiosir... [more]
A0A7S0XLJ9_9STRA1.680e-9173.91Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S4K4U2_9STRA5.370e-9175.13Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10500contigH-canaliculatus_F_contig10500:897..4242 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.6
Seed ortholog evalue2.7e-99
Seed eggNOG ortholog2880.D7FT14
Preferred nameFIGNL1
GOsGO:0000003,GO:0000018,GO:0000070,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000287,GO:0000819,GO:0001503,GO:0001649,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006163,GO:0006282,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007059,GO:0007140,GO:0007276,GO:0008150,GO:0008152,GO:0008283,GO:0008568,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009611,GO:0009628,GO:0009966,GO:0009968,GO:0009987,GO:0010212,GO:0010569,GO:0010646,GO:0010648,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0019219,GO:0019222,GO:0019637,GO:0019693,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023051,GO:0023057,GO:0030154,GO:0031110,GO:0031114,GO:0031323,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032886,GO:0033043,GO:0033687,GO:0034641,GO:0042623,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043244,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046034,GO:0046483,GO:0046872,GO:0048232,GO:0048285,GO:0048471,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048609,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051013,GO:0051052,GO:0051128,GO:0051171,GO:0051276,GO:0051321,GO:0051493,GO:0051704,GO:0051716,GO:0051726,GO:0055086,GO:0060255,GO:0060548,GO:0065007,GO:0070013,GO:0070507,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0072521,GO:0080090,GO:0080134,GO:0080135,GO:0098813,GO:0104004,GO:0140013,GO:0140014,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1901879,GO:1902531,GO:1902532,GO:1902903,GO:1903046,GO:1903047,GO:2000779,GO:2001020,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.Belongs to the AAA ATPase family
EggNOG OGsCOG0464@1,KOG0740@2759
Ec32 ortholog descriptionputative; AAA family ATP ase
Ec32 orthologEc-24_004440.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size903
Cds size903
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10500.490.1prot_H-canaliculatus_F_contig10500.490.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10500 897..4242 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928701.596385-CDS-H-canaliculatus_F_contig10500:896..9991622928701.596385-CDS-H-canaliculatus_F_contig10500:896..999Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 897..999 -
1696845530.249661-CDS-H-canaliculatus_F_contig10500:896..9991696845530.249661-CDS-H-canaliculatus_F_contig10500:896..999Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 897..999 -
1622928701.6218867-CDS-H-canaliculatus_F_contig10500:1770..18921622928701.6218867-CDS-H-canaliculatus_F_contig10500:1770..1892Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 1771..1892 -
1696845530.2641444-CDS-H-canaliculatus_F_contig10500:1770..18921696845530.2641444-CDS-H-canaliculatus_F_contig10500:1770..1892Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 1771..1892 -
1622928701.637016-CDS-H-canaliculatus_F_contig10500:3060..32031622928701.637016-CDS-H-canaliculatus_F_contig10500:3060..3203Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 3061..3203 -
1696845530.2763295-CDS-H-canaliculatus_F_contig10500:3060..32031696845530.2763295-CDS-H-canaliculatus_F_contig10500:3060..3203Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 3061..3203 -
1622928701.6657295-CDS-H-canaliculatus_F_contig10500:3707..42421622928701.6657295-CDS-H-canaliculatus_F_contig10500:3707..4242Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 3708..4242 -
1696845530.286518-CDS-H-canaliculatus_F_contig10500:3707..42421696845530.286518-CDS-H-canaliculatus_F_contig10500:3707..4242Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10500 3708..4242 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10500.490.1

>prot_H-canaliculatus_F_contig10500.490.1 ID=prot_H-canaliculatus_F_contig10500.490.1|Name=mRNA_H-canaliculatus_F_contig10500.490.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=301bp
YNNNNNNNNHSDNLDDDGSMRRQGGQGPPIPPRLPNSSGLVRKRKFIPPG
RLDNNNNNNGKGNGGGGGTNSSAGGRFPGSAALGGRGGASGGGGGGGGGG
EEEELPEELQHLDKAMVEKIMQEVQQRGDPVTFDQIAGLEFAKKSVIELV
CWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISA
SSLCSKWIGEGEKMVRTLFSVASYHQPAVIFIDEVDSMLSMRSADENEAS
RRLKTEFLIQLDGAGTKAADRVLVVGATNRPQELDEAARRRFVDSHPRSR
*
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mRNA from alignment at H-canaliculatus_F_contig10500:897..4242-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10500.490.1 ID=mRNA_H-canaliculatus_F_contig10500.490.1|Name=mRNA_H-canaliculatus_F_contig10500.490.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3346bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10500:897..4242- (Hapterophycus canaliculatus Oshoro5f female)
TACAACAACAACAACAACAACAACAACCACAGCGACAACTTGGATGACGA
CGGCTCCATGCGACGGCAAGGCGGCCAGGGGCCGCCCATCCCCCCCCGGC
TCCCCAACAGCTCTGGGCTCGTCCGGAAACGGAAGTTCATTCCCCCCGGT
AGGCTGGACAACAACAACAACAACAACGGTAAGGGCAACGGCGGAGGTGG
CGGAACAAACTCCTCCGCGGGAGGAAGATTTCCGGGATCGGCCGCTCTGG
GAGGGCGAGGGGGCGCGAGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGC
GAGGAGGAGGAACTACCGGAGGAGCTGCAGCACCTCGACAAGGCCATGGT
GGAGAAGATCATGCAGGAGGTGCAGCAGAGGGGGGACCCCGTGACCTTCG
ACCAGATCGCGGGCCTGGAGTTCGCCAAGAAGAGCGTGATCGAGCTCGTC
TGCTGGCCCATGGAGCGCCCGGACATTTTCACGGGGCTCCGGTCGCTGCC
CAAGGGGCTGCTGCTGTTCGGCCCGCCTGGGACCGGTGAGAGCCTGGCGC
GGAGGTGTTTGGTTTGGTTCTGTCGTGGTCGAAAGCTTTCTTTTTTCGTC
AAGGTGTCTGTCCTGCCTTGCTGAGCCATTTTGGTTGGGTTGTTTTACGC
CTGCCGAGCGACGCTGTGGTGATCGTTCGTCGGCAGGCTAAGCGTGGCTG
GCGTGGGCTGCCGGCTGCCTTGGGTGGGAGAGGTGGCAGGCAAGCCGCCG
GTGAGGCTTGGTCGGCCGCTGGCGCTGTGCCTTGGCGATCTCGTCGTGGG
CGGTCTGGCACGCCGAGGTGCAGCCTTTCCTTCGCCTGCATCGGCTAGGC
GAAGGGTCTAGGCTAGCCGGCTGCCCGGCGAAGCTGCTGAACGCGTTCCT
GCTCGCACAGGAGTCGCGTCGAGCACGTTGGCGTCGGCGACGACGACGGT
GGCGATGACCACCCCGATGCCGAAAGCGATGACCACTGCGTGACGGCGTT
AGACGGGTGACACTCTTGCTCCGCTGTTCGACGCACCAGGAAAAACTCTG
ATCGGCAAGGCCATCGCGCACCAGTCCGGAGCGACGTTCTTCTCGATCTC
GGCGTCGTCCCTGTGCAGCAAGTGGATCGGGGAGGGGGAGAAGATGGTCC
GGACGCTCTTCTCCGTCGCGAGCTACCACCAGGTACCCACTTCTCTTCTC
GGCTCGCTCTCGCTCTTTTTCGTGTGGAGCTACGGTAGTGCGGAGGAGCA
CTGTTGTAGGTCCTGCCGGCGCGAGTAGGTAGGCCGAGTTTTGCCGTGTG
GAGAGAACGCCGGCGACGAAGACGGTGCCGGACGCAGCCACCAAGGAGCC
CTACAAGCAGGTTTGGGGCACGACCGCCGTGAATCGAAAGCCACGCCTGC
GCGATGAACGGTCGTTACTCCGGAGCAACCAATGTGTCCTGTCTCCGGTC
GCGAAAATTCGCGGAAGGTGGCTCGTAGCCTCTTGCCCTACCCTCGGAGC
TGCTGCAAGCGCACTCAAGGCTGAGGCGTGCGATGTGGGCAGCTGCGCCG
TGCGCGAAAGACGGATCGCCCCCGTGTCCGCAATCTCCGGTCTCCGGCAG
GCCCCGCGCGCGACGACTTACCGCAAGAATCGCGGCCTTGGCACACGAAG
GGGTGCGGTAGATTTTGCCGACCGGATTCCTCGACGACGTACGGGGTGCC
GAAAGGGAGGCAGGGCGCCATCGATCGAATAGCTGACATCTTGGCCCAGA
TCTATCAAGAACCGTTTTTTTAGCGGTATCCGCATCACCCTCTCCGTTGC
CGAGGTCTCGGGACGGGAAAAAAAACTATCGCGCCCCTCCATCTCTGTTC
CAAGAGCCCGGTTACTTGCGGTTTCCCTGCCCCGTGTCGTGTCTATACGG
TCGGTCATGTTTGAGGACCCTGAACGGGTGTCTTGTGTGTGAGTCTTCCG
AACGCCACGTCATGCGCTGACCCGGCTCAAGCCGTGCTCGTGCTGTTCCC
CTTCTATCGGCCTGTGCCTCCTGTACCGACTGCTGCGGCACCCGGCAGGG
GTGTCTCGCGCCCAGCACTGTCGAGGTGGATTCGCACACTGGGCGTTTTC
CCAGAGTGTACTTGTCTGGTTTTTGACAAGCAACCTTGACCGTTCTCTGC
TACCATGTGCTCTGTTTGTTCTTCCTGTCAAGCGATAGTTAGCGCTTGAG
TCACGTACGGGCGTTGCCTTCGTCGCCATTATCGCAGTTGTTGCTGCGGC
TGCTGCTGCTGCTGCTGCTGCAATTACTGATCACAGCGATGCTCTTCTTC
GTGAAATCGCCGTCGCCGCTGTTCGACCGCCCTCTGTCTTCGCCCGGTAG
CCGGCGGTTATCTTCATCGACGAGGTGGACTCGATGCTGTCCATGCGGAG
CGCCGACGAGAACGAGGCAAGCAGGCGGCTCAAGACCGAGTTCCTCATAC
AGCTCGACGGCGCAGGCACCAAGTGAGACCCGTCCTCCCTGCACACCGGG
GAGGAAGAGAGTGCCACCGCAACCCCGCCTTCCAGGATTCGAAACCCGGC
CCGCTCCTCCTCCTCCGGAGACCAAGTCCGTCGTTTCGTTGTATCGTGCC
CTTAGCCCACCGAGTGGGATGCTGCTTCCGATCATCGTGTCGTGAGACGC
GGCGGGCGTCAGCGCGTTCTTGGAGCACTTTTTTTGTAGACGACACGCTC
GTGACGGGGGCGTCCAGCCCGGCATCTCCGCCGCAGCCGCAAGCTTGCAC
CGTTGGCGACGAGGAAAACGCCTCGGTATCATGCGAGGGGTACGTGCAGG
TTTTGGGTGTTTGGTCCGTAATGTCGCCGTTTCTCTGCCGGCGACGCTGG
CTGCCAAGCTTTGGCTCTCATCGGCTGAAGACCGTGTAGCTTTTTTCGTG
TTTGTCGACGGGAGAATTTGTTGTAGGCTTCCCCGCGTGGGCGTGGGTAG
CGATCGTCCTGGCCCACATGTCGTTGTGTGAGACCGGCGCTCACCTGCCC
CCGGCTCTCGGCTACCGTCTGCCGTCGGCGTATCGCGGAACACAGCAGCT
TGTCTTGTCGACACCCTAGAGCGTGTGAGACTCTTTGGCGGCGGTGCCGG
ACCTCACGGAGCACAGCGGCCTGTTCTACAGAAAAGCACTCCACGGCGCG
CGAAGGAGAGCCTTCAAGACATAACAGGGCTCCTTCTCCTTTCCCTCTTT
TTTGTTGTTTTGTTTTGTTTTTTCGTCGCGCGTGGCACGCCAGGGCTGCC
GACCGAGTGCTGGTGGTGGGCGCCACCAACCGACCGCAAGAACTGGACGA
GGCTGCGCGACGAAGGTTTGTTGATTCTCACCCTCGTTCGCGTTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10500:897..4242-

>mRNA_H-canaliculatus_F_contig10500.490.1 ID=mRNA_H-canaliculatus_F_contig10500.490.1|Name=mRNA_H-canaliculatus_F_contig10500.490.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1806bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10500:897..4242- (Hapterophycus canaliculatus Oshoro5f female)
TACAACAACAACAACAACAACAACAACCACAGCGACAACTTGGATGACGA
CGGCTCCATGCGACGGCAAGGCGGCCAGGGGCCGCCCATCCCCCCCCGGC
TCCCCAACAGCTCTGGGCTCGTCCGGAAACGGAAGTTCATTCCCCCCGGT
AGGCTGGACAACAACAACAACAACAACGGTAAGGGCAACGGCGGAGGTGG
CGGAACAAACTCCTCCGCGGGAGGAAGATTTCCGGGATCGGCCGCTCTGG
GAGGGCGAGGGGGCGCGAGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGC
GAGGAGGAGGAACTACCGGAGGAGCTGCAGCACCTCGACAAGGCCATGGT
GGAGAAGATCATGCAGGAGGTGCAGCAGAGGGGGGACCCCGTGACCTTCG
ACCAGATCGCGGGCCTGGAGTTCGCCAAGAAGAGCGTGATCGAGCTCGTC
TGCTGGCCCATGGAGCGCCCGGACATTTTCACGGGGCTCCGGTCGCTGCC
CAAGGGGCTGCTGCTGTTCGGCCCGCCTGGGACCGTACAACAACAACAAC
AACAACAACAACCACAGCGACAACTTGGATGACGACGGCTCCATGCGACG
GCAAGGCGGCCAGGGGCCGCCCATCCCCCCCCGGCTCCCCAACAGCTCTG
GGCTCGTCCGGAAACGGAAGTTCATTCCCCCCGGTAGGCTGGACAACAAC
AACAACAACAACGGTAAGGGCAACGGCGGAGGTGGCGGAACAAACTCCTC
CGCGGGAGGAAGATTTCCGGGATCGGCCGCTCTGGGAGGGCGAGGGGGCG
CGAGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGCGAGGAGGAGGAACTA
CCGGAGGAGCTGCAGCACCTCGACAAGGCCATGGTGGAGAAGATCATGCA
GGAGGTGCAGCAGAGGGGGGACCCCGTGACCTTCGACCAGATCGCGGGCC
TGGAGTTCGCCAAGAAGAGCGTGATCGAGCTCGTCTGCTGGCCCATGGAG
CGCCCGGACATTTTCACGGGGCTCCGGTCGCTGCCCAAGGGGCTGCTGCT
GTTCGGCCCGCCTGGGACCGGAAAAACTCTGATCGGCAAGGCCATCGCGC
ACCAGTCCGGAGCGACGTTCTTCTCGATCTCGGCGTCGTCCCTGTGCAGC
AAGTGGATCGGGGAGGGGGAGAAGATGGTCCGGACGCTCTTCTCCGTCGC
GAGCTACCACCAGGAAAAACTCTGATCGGCAAGGCCATCGCGCACCAGTC
CGGAGCGACGTTCTTCTCGATCTCGGCGTCGTCCCTGTGCAGCAAGTGGA
TCGGGGAGGGGGAGAAGATGGTCCGGACGCTCTTCTCCGTCGCGAGCTAC
CACCAGCCGGCGGTTATCTTCATCGACGAGGTGGACTCGATGCTGTCCAT
GCGGAGCGCCGACGAGAACGAGGCAAGCAGGCGGCTCAAGACCGAGTTCC
TCATACAGCTCGACGGCGCAGGCACCAACCGGCGGTTATCTTCATCGACG
AGGTGGACTCGATGCTGTCCATGCGGAGCGCCGACGAGAACGAGGCAAGC
AGGCGGCTCAAGACCGAGTTCCTCATACAGCTCGACGGCGCAGGCACCAA
GGCTGCCGACCGAGTGCTGGTGGTGGGCGCCACCAACCGACCGCAAGAAC
TGGACGAGGCTGCGCGACGAAGGTTTGTTGATTCTCACCCTCGTTCGCGT
TAAGGCTGCCGACCGAGTGCTGGTGGTGGGCGCCACCAACCGACCGCAAG
AACTGGACGAGGCTGCGCGACGAAGGTTTGTTGATTCTCACCCTCGTTCG
CGTTAA
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