mRNA_H-canaliculatus_F_contig10358.371.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.440e-29 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEVFIAKI 204 GTEVN+E CS++PGPGC A SGN QN PGEG+IHVHRG HGVGDL EASYDWRNPVAE++I K+ Sbjct: 160 GTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVGDLEEASYDWRNPVAEIYIQKL 223
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 110 bits (274), Expect = 2.030e-28 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVG-DLAEASYDWRNPVAEVFIAK 201 GTE NNELC+ +PGP C ADSGN+++ PGE FIHVHRGFHGVG DL EA+YDWRNPVAEVFIA+ Sbjct: 154 GTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 217
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 101 bits (252), Expect = 2.870e-25 Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVG-DLAEASYDWRNPVAEVFIA 198 GTE NNELC+ +PGP C ADSGN+++ PGEGFI V RGFHGVG DL EA+YDWRNPVAEV +A Sbjct: 137 GTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: A0A7S1D5Z8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5Z8_CYCTE) HSP 1 Score: 86.3 bits (212), Expect = 4.630e-20 Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 4 LTPGTEVNNELCSSMPGPGCDA-DSGNIQNTPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEV 189 L G+EVNNELCSS+PGPGC ++ N+ + GEG++ VH+GFHGVGDL A YDWRNP A V Sbjct: 61 LDAGSEVNNELCSSIPGPGCAMINTTNVASGDGEGYVFVHKGFHGVGDLPAAEYDWRNPAAVV 123
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: A0A7C1XZS2_9GAMM (Spondin domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1XZS2_9GAMM) HSP 1 Score: 85.1 bits (209), Expect = 1.610e-18 Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEVFIAKIPTDSED 222 G+E+NNELC+ +PGP C SGN + GEGF+ +H+G HGVGDL + DWR PVA V I +I +D Sbjct: 171 GSELNNELCAYIPGPPCSPTSGNARTATGEGFVTIHKGVHGVGDLDAVALDWRGPVARVTITRIRKGDDD 240
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: UPI0015C41B44 (spondin domain-containing protein n=1 Tax=Candidatus Entotheonella palauensis TaxID=93172 RepID=UPI0015C41B44) HSP 1 Score: 82.8 bits (203), Expect = 3.060e-18 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPG--CDADSGNIQNTPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEVFIAKIP 207 GTE N+ELC+ +PGP C + N+ EGF+HVHRG HG+GDL + YDWRNPVA V I+ +P Sbjct: 104 GTEFNDELCAHIPGPASVCTGEGFNMSRDNAEGFVHVHRGIHGIGDLNASVYDWRNPVARVSISAMP 170
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: A0A3D0SSZ2_9GAMM (Spondin domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0SSZ2_9GAMM) HSP 1 Score: 83.6 bits (205), Expect = 4.210e-18 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEVFIAKI 204 G+E N+ELC S+PGP C + G+ GEGF+H+H G HG+GDL A YDWRNP+A V + KI Sbjct: 155 GSEPNDELCKSIPGPDCGGEGGS-PGAGGEGFVHIHAGIHGIGDLQAAEYDWRNPMASVTVQKI 217
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: A0A369T711_9PROT (Spondin domain-containing protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369T711_9PROT) HSP 1 Score: 82.0 bits (201), Expect = 1.940e-17 Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEVFIAKIP 207 GTE N+ELC+ +PG G A G + GEG++H+H G HG+GDLAE ++DWRNPVA + I+++P Sbjct: 162 GTEPNSELCADIPGGGGCAGEG-LSAEDGEGYVHIHAGIHGIGDLAENTFDWRNPVARIVISRVP 225
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: D7G406_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G406_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 2.100e-17 Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 1 PLTPGTEVNNELCSSMPGPGCDADSGNIQN--TPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEVFIAK 201 P GTE NNE CS MPG A +N EGFIHVHRG GVGDL++A YDW+NPVAEV ++K Sbjct: 12 PPRKGTEKNNEKCSCMPGRAWPASPKTRENHGRGSEGFIHVHRGIKGVGDLSQADYDWKNPVAEVAVSK 80
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Match: A0A7U6JI78_9GAMM (Spondin domain-containing protein n=1 Tax=Thiolapillus brandeum TaxID=1076588 RepID=A0A7U6JI78_9GAMM) HSP 1 Score: 81.6 bits (200), Expect = 2.280e-17 Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 13 GTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVGDLAEASYDWRNPVAEVFIAKI 204 GTE+N+ELCS++PGP C +++N GEGFI VH G HGVGDLA +YDWRNP A V I ++ Sbjct: 155 GTEMNDELCSNIPGPDCGGAGMSVEN--GEGFISVHPGIHGVGDLAPGTYDWRNPAAMVKIERM 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10358.371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10358.371.1 >prot_H-canaliculatus_F_contig10358.371.1 ID=prot_H-canaliculatus_F_contig10358.371.1|Name=mRNA_H-canaliculatus_F_contig10358.371.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=75bp PLTPGTEVNNELCSSMPGPGCDADSGNIQNTPGEGFIHVHRGFHGVGDLAback to top mRNA from alignment at H-canaliculatus_F_contig10358:2516..2740- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10358.371.1 ID=mRNA_H-canaliculatus_F_contig10358.371.1|Name=mRNA_H-canaliculatus_F_contig10358.371.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=225bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10358:2516..2740- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10358:2516..2740- >mRNA_H-canaliculatus_F_contig10358.371.1 ID=mRNA_H-canaliculatus_F_contig10358.371.1|Name=mRNA_H-canaliculatus_F_contig10358.371.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=450bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10358:2516..2740- (Hapterophycus canaliculatus Oshoro5f female)back to top |