mRNA_H-canaliculatus_F_contig10297.310.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10297.310.1
Unique NamemRNA_H-canaliculatus_F_contig10297.310.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 6.380e-116
Identity = 192/254 (75.59%), Postives = 213/254 (83.86%), Query Frame = 1
Query:    1 QVTSVAWMILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQASASGRGLYGRGALTVGEQIHPFTLLHYMSLSSAATLVPFILALELGTLRHIAVTFTGERGAK 762
            QV  +  ++LLY+ VSMSLTLLDKWL+T  G+GF+APLTLISLTYLIMHLVSLSIR  LR + V  GE GGD S L+Q+LSW Q A KV PVAAASGLEVGTS LGL+VMHVG+HTMVRSTVPIFVLLFSVGMGLQ+F+C LL VV+LVSGGV LL SGQ ND + DFP+DGFLLTLLSGML GLKWTLSQ    GRGLYGRGA+TVGE IHPFTLLHYMSLSSAA+LVPF LALELG L  +AVTF+G R  K
Sbjct:  272 QVNLILGIVLLYIWVSMSLTLLDKWLMT--GMGFNAPLTLISLTYLIMHLVSLSIRTWLRHRGVEEGEGGGDASHLVQRLSWHQWAWKVFPVAAASGLEVGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRNDQEEDFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAITVGEHIHPFTLLHYMSLSSAASLVPFALALELGALHEMAVTFSGHRIVK 523          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: A0A6H5JMM1_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM1_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 9.170e-116
Identity = 188/254 (74.02%), Postives = 212/254 (83.46%), Query Frame = 1
Query:    1 QVTSVAWMILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQASASGRGLYGRGALTVGEQIHPFTLLHYMSLSSAATLVPFILALELGTLRHIAVTFTGERGAK 762
            QV  +  +ILLYM VSMSLTLLDKWL+T  G+GF+APLTLISLTYLIMHLVSLS R  LR + V  GE GGD S L+Q++SW Q A KV PVAAASGLEVGTS LGL+VMHVG+HTMVRSTVPIFVLLFSVGMGLQ+F+C LL VV+LVSGGV LL SGQ +D + +FP+DGFLLTLLSGML GLKWTLSQ    GRGLYG+GA+TVGE IHPFTLLHYMSLSSAA+LVPF L LELG+L  +AVTF+G R  K
Sbjct:   64 QVNLILGIILLYMWVSMSLTLLDKWLMT--GMGFNAPLTLISLTYLIMHLVSLSTRTWLRHRGVEEGEGGGDASHLVQRVSWHQWAWKVFPVAAASGLEVGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRSDQEENFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGKGAITVGEHIHPFTLLHYMSLSSAASLVPFALTLELGSLHEMAVTFSGHRMVK 315          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: A0A1B2J554_PICPA (BA75_00418T0 n=3 Tax=Komagataella TaxID=460517 RepID=A0A1B2J554_PICPA)

HSP 1 Score: 87.8 bits (216), Expect = 1.550e-16
Identity = 53/186 (28.49%), Postives = 100/186 (53.76%), Query Frame = 1
Query:   25 ILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFL---LTLLSGMLGGLKWTLSQ 573
            IL + + S+S++L +KW+     +GF+ P+ + SL  +++ ++S S      +  +         S L   + W   AR +LP A AS  ++G      + + + L+TMV+S+  +FVLL+ V   L+    RL+ +V +++GGV ++  G ++    + P   F+   L L+S ++ GL+W L+Q
Sbjct:   18 ILAWYLFSLSISLYNKWMFGP-DLGFEFPVIITSLHQMVLFILSGSCLLLTPQFRLPND------SKLSYSMPWQMYARTILPCALASAADIGAGNSSFRFITLSLYTMVKSSSLVFVLLWGVAFKLETLSTRLVFIVAIMTGGVVMMVYGHDSKDSDNRPTHIFIGCSLVLISAVMSGLRWALTQ 196          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: A0A8N7WQQ5_SPOFR (solute carrier family 35 member C2-like n=2 Tax=Spodoptera TaxID=7106 RepID=A0A8N7WQQ5_SPOFR)

HSP 1 Score: 87.0 bits (214), Expect = 4.590e-16
Identity = 74/246 (30.08%), Postives = 124/246 (50.41%), Query Frame = 1
Query:   22 MILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQA--SASGRGLYGRGALTVGEQ------IHPFTLLH-------YMSLSSAATLVPFILALELG 714
            +ILLY  +S+ LT   +WL+TD    F  PLT++    ++  L+++ +R  L+   +TG       +P L  L      + V P   ASG++VG S  GL+++ + L+TM +ST  IF+LLF++ +GL+     L+ +VL++S G+ +            F + GF   L++    GL+WT +Q     S  GL+    +    Q      + PFT++        Y+   SA  L+P IL + +G
Sbjct:   42 LILLYFALSIGLTFYQRWLLTD----FKFPLTVVMYHLIVKWLLAVCVRVVLQL--ITG-------TPQLI-LPCMTCLKSVGPTGLASGIDVGFSNWGLELVTISLYTMTKSTTIIFILLFAIVLGLEKKSWSLVGIVLMISAGLIMFTYKATQ-----FNLLGFNFLLIASFAAGLRWTFAQLLMQKSKLGLHNPVDMVFHVQPWMFVSLLPFTIMFEGVACYDYLQKLSAEKLLPTILKVSVG 268          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: A0A7E5W6V2_TRINI (solute carrier family 35 member C2-like isoform X2 n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5W6V2_TRINI)

HSP 1 Score: 85.1 bits (209), Expect = 4.840e-16
Identity = 61/184 (33.15%), Postives = 100/184 (54.35%), Query Frame = 1
Query:   22 MILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQ 573
            +ILLY  +S+ LT   +WL+TD    F  PLT++    ++  ++S+ +R  L+   VTG       +PLL  L      R V P   ASG++VG S  GL+++ + L+TM +ST  IF+L F++ +GL+     L+ +VL+++ G+ +            F + GF   LL+    GL+WT +Q
Sbjct:   42 LILLYFSLSIGLTFYQRWLLTD----FKFPLTVVMYHLIVKWMLSVVVRLVLQ--VVTGS------APLL--LPCMTCLRSVGPTGLASGIDVGFSNWGLELVTISLYTMTKSTTIIFILGFAILLGLEKKSWSLVGIVLMIAAGLIMFTYKATQ-----FNLLGFNFLLLASFAAGLRWTFAQ 206          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: A0A3S2NCI8_CHISP (TPT domain-containing protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A3S2NCI8_CHISP)

HSP 1 Score: 87.0 bits (214), Expect = 6.140e-16
Identity = 72/239 (30.13%), Postives = 123/239 (51.46%), Query Frame = 1
Query:   22 MILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQA--SASGRGLYGRGALTVGEQIHPFTLLHYMSLSSAATLVPFILALE-LGTLRHI 729
            +IL+Y  +S+ LT   +WL+     GF+ PLT++    +I  ++S+ +R  L    +TG       +P L  L +    R V P   ASG++VG S  GL+++ + L+TM +ST  IF+LLF++ +GL+     L+ +VLL++ G+ +            F + GF   LL+    GL+WT +Q     S  GL+           +P  ++ ++      +L+PF++  E L  LRH+
Sbjct:   41 LILIYFSLSIGLTFYQRWLLK----GFNFPLTVVMYHLIIKWILSVLVRTILYL--ITG-------TPQLV-LPFMTCLRSVGPTGLASGIDVGFSNWGLELVTISLYTMTKSTTIIFILLFAILLGLEKKSWSLVGIVLLIAVGLVMFTYKATQ-----FDLLGFNFLLLASFAAGLRWTFAQLLMQRSSLGLH-----------NPIDMVFHVQPWMFLSLLPFMIMFEGLECLRHV 249          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: UPI001CF30D90 (solute carrier family 35 member C2-like isoform X1 n=5 Tax=Acropora TaxID=6127 RepID=UPI001CF30D90)

HSP 1 Score: 86.3 bits (212), Expect = 6.520e-16
Identity = 59/176 (33.52%), Postives = 94/176 (53.41%), Query Frame = 1
Query:   46 SMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQ 573
            S+SLT  +KW +      F  PL+ +S+ +  M  VS ++   L        E   ++  ++  L WS   ++VLP A AS L++G S   L  + V L+TM +ST  IF+L+F++  GL+ +   L+ +V L++ G+ L            F  +GF+L LL+  L GL+WTLSQ
Sbjct:   28 SISLTFYNKWFLQR----FHFPLS-VSVVHYAMVFVSTALLRLL-------WEIWSEKKRII--LPWSLYLKRVLPTAIASALDIGCSNWSLMYITVSLYTMTKSTSVIFILMFAIAFGLEQWNFSLVAIVFLIASGLFLFTYESTA-----FSAEGFVLALLASGLSGLRWTLSQ 184          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: A0A7E5W5N3_TRINI (solute carrier family 35 member C2-like isoform X1 n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5W5N3_TRINI)

HSP 1 Score: 85.1 bits (209), Expect = 1.840e-15
Identity = 61/184 (33.15%), Postives = 100/184 (54.35%), Query Frame = 1
Query:   22 MILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQ 573
            +ILLY  +S+ LT   +WL+TD    F  PLT++    ++  ++S+ +R  L+   VTG       +PLL  L      R V P   ASG++VG S  GL+++ + L+TM +ST  IF+L F++ +GL+     L+ +VL+++ G+ +            F + GF   LL+    GL+WT +Q
Sbjct:   42 LILLYFSLSIGLTFYQRWLLTD----FKFPLTVVMYHLIVKWMLSVVVRLVLQ--VVTGS------APLL--LPCMTCLRSVGPTGLASGIDVGFSNWGLELVTISLYTMTKSTTIIFILGFAILLGLEKKSWSLVGIVLMIAAGLIMFTYKATQ-----FNLLGFNFLLLASFAAGLRWTFAQ 206          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: UPI00103AC2AD (solute carrier family 35 member C2 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103AC2AD)

HSP 1 Score: 84.7 bits (208), Expect = 3.100e-15
Identity = 62/184 (33.70%), Postives = 104/184 (56.52%), Query Frame = 1
Query:   22 MILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQ 573
            +IL+Y  +S+ LT   +WL+     GF+ PLT++ + +LI+  + LS+  RL R  +T       R+P L  L +    R V P   ASG++VG S  GL+++ + L+TM +ST  IF+L F++ +GL+     L+ +VLL++ G+ +            F + GF   LL+  + G++WTL+Q
Sbjct:   42 LILIYFSLSIGLTFYQRWLLK----GFNFPLTVV-MYHLIVKWI-LSVVVRLIRYLIT-------RTPQLL-LPFMTCLRSVGPTGLASGIDVGFSNWGLELVTISLYTMTKSTTIIFILGFAIMLGLEKKSWSLVGIVLLIAAGLVMFTYKATQ-----FNLLGFNFLLLASFMAGMRWTLAQ 206          
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Match: A0A642UH24_9ASCO (TPT domain-containing protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642UH24_9ASCO)

HSP 1 Score: 84.0 bits (206), Expect = 3.450e-15
Identity = 60/192 (31.25%), Postives = 100/192 (52.08%), Query Frame = 1
Query:   25 ILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRARLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGLQVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLCSGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQASASGRGLY 600
            IL++   S+SL++ +KWL +  G+ F+ P+   SL   +   V+  IR R R   +                 W    R ++P A AS  ++G   L L+ + +  +TMV+S+   F L+FSV  GL+ F  RLLL++L++S GV ++ +G+       F + GFLL + +    GL+W+L+Q    G  +Y
Sbjct:   39 ILMWYGFSISLSVYNKWLFSVEGVDFNYPIFSTSLHQFVQFGVAYLIR-RYREDHIE---------------DWD--LRAIMPCALASAGDIGMGNLSLRTVTLSFYTMVKSSNLGFALMFSVLFGLERFNWRLLLIILVMSVGVVMMVAGETV-----FSLIGFLLVMGAACCSGLRWSLTQMLLKGSKMY 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10297.310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL66_ECTSI6.380e-11675.59TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JMM1_9PHAE9.170e-11674.02TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1B2J554_PICPA1.550e-1628.49BA75_00418T0 n=3 Tax=Komagataella TaxID=460517 Rep... [more]
A0A8N7WQQ5_SPOFR4.590e-1630.08solute carrier family 35 member C2-like n=2 Tax=Sp... [more]
A0A7E5W6V2_TRINI4.840e-1633.15solute carrier family 35 member C2-like isoform X2... [more]
A0A3S2NCI8_CHISP6.140e-1630.13TPT domain-containing protein n=1 Tax=Chilo suppre... [more]
UPI001CF30D906.520e-1633.52solute carrier family 35 member C2-like isoform X1... [more]
A0A7E5W5N3_TRINI1.840e-1533.15solute carrier family 35 member C2-like isoform X1... [more]
UPI00103AC2AD3.100e-1533.70solute carrier family 35 member C2 n=1 Tax=Ostrini... [more]
A0A642UH24_9ASCO3.450e-1531.25TPT domain-containing protein n=1 Tax=Trichomonasc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10297contigH-canaliculatus_F_contig10297:942..4589 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.2
Seed ortholog evalue9.8e-95
Seed eggNOG ortholog2880.D7FL66
KEGG koko:K15280
KEGG TC2.A.7
EggNOG free text desc.UDP-glucose transmembrane transport
EggNOG OGsCOG0697@1,KOG1443@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionTriose-phosphate transporter domain
Ec32 orthologEc-19_005320.1
Exons6
Model size762
Cds size741
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928663.376419-UTR-H-canaliculatus_F_contig10297:941..9621622928663.376419-UTR-H-canaliculatus_F_contig10297:941..962Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10297 942..962 +
1696845517.7268922-UTR-H-canaliculatus_F_contig10297:941..9621696845517.7268922-UTR-H-canaliculatus_F_contig10297:941..962Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10297 942..962 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928663.3886578-CDS-H-canaliculatus_F_contig10297:962..10261622928663.3886578-CDS-H-canaliculatus_F_contig10297:962..1026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 963..1026 +
1696845517.7392807-CDS-H-canaliculatus_F_contig10297:962..10261696845517.7392807-CDS-H-canaliculatus_F_contig10297:962..1026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 963..1026 +
1622928663.3984172-CDS-H-canaliculatus_F_contig10297:1288..15001622928663.3984172-CDS-H-canaliculatus_F_contig10297:1288..1500Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 1289..1500 +
1696845517.7547328-CDS-H-canaliculatus_F_contig10297:1288..15001696845517.7547328-CDS-H-canaliculatus_F_contig10297:1288..1500Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 1289..1500 +
1622928663.4080322-CDS-H-canaliculatus_F_contig10297:2380..24911622928663.4080322-CDS-H-canaliculatus_F_contig10297:2380..2491Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 2381..2491 +
1696845517.7648587-CDS-H-canaliculatus_F_contig10297:2380..24911696845517.7648587-CDS-H-canaliculatus_F_contig10297:2380..2491Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 2381..2491 +
1622928663.4174137-CDS-H-canaliculatus_F_contig10297:3158..33361622928663.4174137-CDS-H-canaliculatus_F_contig10297:3158..3336Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 3159..3336 +
1696845517.7737815-CDS-H-canaliculatus_F_contig10297:3158..33361696845517.7737815-CDS-H-canaliculatus_F_contig10297:3158..3336Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 3159..3336 +
1622928663.427164-CDS-H-canaliculatus_F_contig10297:3514..35871622928663.427164-CDS-H-canaliculatus_F_contig10297:3514..3587Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 3515..3587 +
1696845517.7839122-CDS-H-canaliculatus_F_contig10297:3514..35871696845517.7839122-CDS-H-canaliculatus_F_contig10297:3514..3587Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 3515..3587 +
1622928663.4377358-CDS-H-canaliculatus_F_contig10297:4486..45891622928663.4377358-CDS-H-canaliculatus_F_contig10297:4486..4589Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 4487..4589 +
1696845517.7945988-CDS-H-canaliculatus_F_contig10297:4486..45891696845517.7945988-CDS-H-canaliculatus_F_contig10297:4486..4589Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10297 4487..4589 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10297.310.1prot_H-canaliculatus_F_contig10297.310.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10297 963..4589 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10297.310.1

>prot_H-canaliculatus_F_contig10297.310.1 ID=prot_H-canaliculatus_F_contig10297.310.1|Name=mRNA_H-canaliculatus_F_contig10297.310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=247bp
MILLYMVVSMSLTLLDKWLITDMGIGFDAPLTLISLTYLIMHLVSLSIRA
RLRRKEVTGGEAGGDRSPLLQQLSWSQLARKVLPVAAASGLEVGTSTLGL
QVMHVGLHTMVRSTVPIFVLLFSVGMGLQDFQCRLLLVVLLVSGGVALLC
SGQENDGQHDFPIDGFLLTLLSGMLGGLKWTLSQASASGRGLYGRGALTV
GEQIHPFTLLHYMSLSSAATLVPFILALELGTLRHIAVTFTGERGAK
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mRNA from alignment at H-canaliculatus_F_contig10297:942..4589+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10297.310.1 ID=mRNA_H-canaliculatus_F_contig10297.310.1|Name=mRNA_H-canaliculatus_F_contig10297.310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3648bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10297:942..4589+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGACTTCAGTAGCCTGGATGATTCTGCTCTACATGGTGGTGTCCAT GTCCCTAACGCTCTTGGACAAGTGGCTCATCACAGGTTAGAGGGGGAGTG TCTTCGACGCGGACATGGGCACATGGACATGGGTATCAGAGCTGCTGCAT CTCGGTGTACGGCACCTCTGCTAGCCCGGTCCTTTCCCTCGGTGACCTTG TCCCTCATTGCTTTACCACCACCACCACCACCACCGCCACCATCACCGCA CGGCCACTCCAACCAATCTACCCCTCACGTTGCCCCTTTGCTTGCCGCCG TGACAACACCGCGCCGTGACAACCCCCCCCATGGCGCTCCTGGAAAGACA TGGGGATCGGCTTCGACGCGCCGCTCACGCTGATCTCGTTGACCTACCTC ATCATGCACCTGGTCAGCCTGTCGATAAGGGCTCGTTTGAGACGGAAGGA GGTGACAGGGGGGGAGGCTGGGGGGGACAGGAGTCCCCTGCTGCAGCAGC TGTCCTGGAGCCAGTTGGCTCGGAAGGTTCTACCCGTCGCCGCCGCCTCG GGGTTAGAGGTGAGCGCCGTGGTTGCAGGCAGTCGGAATGCAGGAGAAAT ATTGGCCGAGAGAGTAGACAGGGGGCGGGTCTGTTGGATGCCTTATGGTG AGGGGCGAGTGTTCCGGTCGGAGCAAGATTATTTTTCTCTCGTGAAGGAC ATCTTCTAGGAAAGAGGCACGTCTTTCGCCGAGTCGTGCGCGGGGTTTGC TTTGGGGTTGAGGGGGTGCCGGCTGTTAGAGGACCGTGTCGCAAAGCTTG AGCTTCGTGCGTGGACGAGACGCCGCTGGCGCAGCTGTCGCCTCCCTCGT CTCGACTAGTTCGCCACGCCACTCATGTGGCATGCCTACGTGGGACGAAA TGCGAGGCGCCAAATCACGAGGCCGGTAGAGGGCCGGTCTGCGCCGCAGC ACCAAACGGTGATGCGGTAACGGCACCGTCGTGACACGCCACGACTTTCC CGAGCCGCTGGTTGCGGACGCTCTGCCGACGGCGAAGAGATGGCGCCAAG CGCGACCCAACCCGCGTGGACGTGGCCCCCGCGACAGCAGATGGTGAAGC TGTGATGCCCCACGGTACGATGCCCAACCGATGCCCTCCCCGCTGGCGAT CGCACAGCACGCTCTGCTGTAGCTCCGGGTGTTGCTGATCGAGCGTACGG CGAGCGAACGCTAGGCCTAGGATGTTCTTGAGCGCGGCGCGGACACACCC GATGACGTCGCCGCGTCAGTGGACCAAGCGAGGTTCCCACTCACCCTTCG CGTGCGTCTCTCCTACCGTTGCCTCGTGCTGCTGTAGCGTGCCCTTCTGG GCGGGGGTAAGGTGACGGCGGCGTGGCCGAAGGTTGGAACGTCACAAATC TCTGCGCTGTGTATCTACGTTGTGCACACATACAAACAGGTGGGCACGAG CACGCTCGGCCTCCAGGTGATGCACGTGGGTCTCCACACCATGGTCAGGT CCACGGTGCCAATCTTCGTGCTGCTGTTCTCCGTCGGAATGGGGCTGCAG GTGACTACACTTTGTGCGCATCGGTCGGGCAGAAGTGAACCTCTGCAGCA TCGATGTGCGCTCGCAGACGGGACCTGTGCCGATGATGCTTGGTGAAAGC GTCGACGTGGGTAAGGACATGAATGATGAGCCGACGAACATCACTGCCTT CTCCGATCGAAGCAAATCTCGCCCTTATTCATTGATTCATCGACTTCTAA TGAACATCCGATAGTTGAACGCGAAAAACACGCCAAGGCTTGGCCGCTCG TGCACCCGACTCTTACCGCGGCCGGCTCTGCGTCTTGCCAAGGACTGACT CCTGGAACTGTTGAAGGGTAGCTATTTTTGTTGTTGTTGTCGGCGTCGCC CTAGTTTTCATGTCGGTCGGACCGCAATGCAGCACACCTCCGCGCCAAGG GTGATCACACGAAGATCAGCCGTGCTCAGAGAAGCCTGAAACGACACCCA CCCTCGCCAAAAGATAAAATTGTGGGCGAACAACCATCACAAGGCTTGTC TATATGCCCGTCGTCAAACGGCATCCGAGGTCACGGTCAAACGAAGTGCA CAGGCCCCACCCAAACACTGCTGTTCATCTCCGCGCAACCTGTTTCATCG CTGGACGCTGGTTCTTGACCGTCGGTGTTTGACCGTTGACTATGGGTTTG ACCTGTCGTTCCCACAGGACTTTCAGTGCAGGCTCTTGTTGGTGGTGTTG CTGGTCAGCGGCGGCGTTGCCCTGCTCTGCTCGGGCCAAGAGAACGACGG CCAGCACGATTTTCCCATCGATGGTTTCCTCCTCACGCTTCTGAGCGGGA TGCTGGGCGGCTTGAAGTGGACGCTGTCCCAGGCAAGCGCGAGCGGTGCA ACCTTCTGTTTTGGTGCGGACGATCGAAGGCCTTGAAAAATTCCCGTCTT CCCTGTTCGACTTGCTGGTGTCGCCAAAGTTAGCGTGTCTCGTTTGGCCG TTCGGTTTGTTGTTCGCTACCGGAGATGAACGGTTAGGTTTGTCCCACGA CTTGTCGCAGGTGTTGCTGCAAGGGAGGGGGCTCTACGGGAGGGGAGCGC TGACCGTTGGAGAGCAAATCCACCCGTTCACCCTCCTCCACTACATGTGA GCACCGATCAGGTTGCTGCTCGATCGCGTTGGAGCTTGCCCTCGAACGCA CGCCCTGCATCGCACGTGCGGTGTCGACACGCAATGACGAGAAAGCTCGT CGTTGCTCGCTATACGCGGCCGGGCTTGGTCCCGACATCCTCGGGCAGAA CTTCGAGGGGAAAGGGAGGGGAAGAAAAGGGGAAGAAACGGATTGGATGG GACGGGCAAGGAAAGAAAAGGCGTGATGTTTGTTCATGCACCAGACATAC CTTTGGTGTTCGGCTGGATCGTATCAAGCCGCGAGCGTCGAAATGGAGGC CCGGAAGCACCTGCTGCGCACGCCTCCGACCGCTTTTTTTCTCGCTTTTG TTGGGCTTGAGCGGACGCCCGCACGGAACTCGAGTTGGGGAACGATGGAA GCGGTCATGCTTTGCGCAATCATGCCTGTCCCGAGCCGCCAACTTTCATG CTGACGCGGGCGCCACGGTATATCGACGTGGTCTAGGAAGAGAGGGAGCA ACGACTGTCGGCAGTGAGCTGCTGCCGTGCATAGACCCGCTGAGGACACT GCATGGGGTTCTTGGGCAGCCCCTTTCCGGGTCTCGACGTTGACGTCCGC CTCGAGGCATCTCATGCCATCACCTGGGCGGGCAGGGCCGGCAGCCGTGC CCTGTTTTCCCTTCGTTTGCCGATTGCATCTGGGCAGAGTTCGTCCTTTG TGGGCCGTGAGCCGAGACATGCCCGCACGTTTGGTTGCCTTGCGGCATCC AGTGTCCTGGCCTGGCGGCTGTCGTTCGTTGCAAACCGTCTGGTTCTGCC GTCATGGCGCCCACGCCGACGTTCATCGCCGTGGCCCATGCCGCCGTTCG CGGTGCCCCCCCTCCTGCGCTTCCAACCCCGGCCGGCCATCGTAGGAGCC TGTCAAGCGCGGCTACCTTGGTGCCTTTCATCCTGGCCTTGGAGTTGGGG ACGCTGCGGCACATTGCCGTCACCTTCACTGGCGAACGGGGAGCAAAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10297:942..4589+

>mRNA_H-canaliculatus_F_contig10297.310.1 ID=mRNA_H-canaliculatus_F_contig10297.310.1|Name=mRNA_H-canaliculatus_F_contig10297.310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1482bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10297:942..4589+ (Hapterophycus canaliculatus Oshoro5f female)
ATGATTCTGCTCTACATGGTGGTGTCCATGTCCCTAACGCTCTTGGACAA
GTGGCTCATCACAGATGATTCTGCTCTACATGGTGGTGTCCATGTCCCTA
ACGCTCTTGGACAAGTGGCTCATCACAGACATGGGGATCGGCTTCGACGC
GCCGCTCACGCTGATCTCGTTGACCTACCTCATCATGCACCTGGTCAGCC
TGTCGATAAGGGCTCGTTTGAGACGGAAGGAGGTGACAGGGGGGGAGGCT
GGGGGGGACAGGAGTCCCCTGCTGCAGCAGCTGTCCTGGAGCCAGTTGGC
TCGGAAGGTTCTACCCGTCGCCGCCGCCTCGGGGTTAGAGACATGGGGAT
CGGCTTCGACGCGCCGCTCACGCTGATCTCGTTGACCTACCTCATCATGC
ACCTGGTCAGCCTGTCGATAAGGGCTCGTTTGAGACGGAAGGAGGTGACA
GGGGGGGAGGCTGGGGGGGACAGGAGTCCCCTGCTGCAGCAGCTGTCCTG
GAGCCAGTTGGCTCGGAAGGTTCTACCCGTCGCCGCCGCCTCGGGGTTAG
AGGTGGGCACGAGCACGCTCGGCCTCCAGGTGATGCACGTGGGTCTCCAC
ACCATGGTCAGGTCCACGGTGCCAATCTTCGTGCTGCTGTTCTCCGTCGG
AATGGGGCTGCAGGTGGGCACGAGCACGCTCGGCCTCCAGGTGATGCACG
TGGGTCTCCACACCATGGTCAGGTCCACGGTGCCAATCTTCGTGCTGCTG
TTCTCCGTCGGAATGGGGCTGCAGGACTTTCAGTGCAGGCTCTTGTTGGT
GGTGTTGCTGGTCAGCGGCGGCGTTGCCCTGCTCTGCTCGGGCCAAGAGA
ACGACGGCCAGCACGATTTTCCCATCGATGGTTTCCTCCTCACGCTTCTG
AGCGGGATGCTGGGCGGCTTGAAGTGGACGCTGTCCCAGGCAAGCGCGAG
CGGACTTTCAGTGCAGGCTCTTGTTGGTGGTGTTGCTGGTCAGCGGCGGC
GTTGCCCTGCTCTGCTCGGGCCAAGAGAACGACGGCCAGCACGATTTTCC
CATCGATGGTTTCCTCCTCACGCTTCTGAGCGGGATGCTGGGCGGCTTGA
AGTGGACGCTGTCCCAGGCAAGCGCGAGCGGGAGGGGGCTCTACGGGAGG
GGAGCGCTGACCGTTGGAGAGCAAATCCACCCGTTCACCCTCCTCCACTA
CATGGAGGGGGCTCTACGGGAGGGGAGCGCTGACCGTTGGAGAGCAAATC
CACCCGTTCACCCTCCTCCACTACATGAGCCTGTCAAGCGCGGCTACCTT
GGTGCCTTTCATCCTGGCCTTGGAGTTGGGGACGCTGCGGCACATTGCCG
TCACCTTCACTGGCGAACGGGGAGCAAAGGAGCCTGTCAAGCGCGGCTAC
CTTGGTGCCTTTCATCCTGGCCTTGGAGTTGGGGACGCTGCGGCACATTG
CCGTCACCTTCACTGGCGAACGGGGAGCAAAG
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