mRNA_H-canaliculatus_F_contig10289.302.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: D7G5Y1_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y1_ECTSI) HSP 1 Score: 335 bits (859), Expect = 2.390e-106 Identity = 182/221 (82.35%), Postives = 194/221 (87.78%), Query Frame = 1 Query: 1 LSRALFRAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVKEHSGVRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDFARLLMARKTG---DVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHESAVEEIMTMLDLDAVGSVSFEEFLKIIRWDP 654 LSRALFRAKNVVRAVHSV++R L PGEAVFRQGD G SLFTV EGEL+VVKEHSGV +VA+LSPGS FGEMALMT+QPRSASVVC+A EGGC V+EISGDDFARLLMAR+TG DVMRMLRARQFRHGVYKLLTELGSEATF+D+ ELRQVFDR DT KSG L+LDELKAAF RADPLL ESAVEEIMTMLDLDAVG VSFEEFLKIIRWDP Sbjct: 693 LSRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAA--EGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDE-------ELRQVFDRADTAKSGTLSLDELKAAFLRADPLLDESAVEEIMTMLDLDAVGCVSFEEFLKIIRWDP 904
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: A0A6H5JE67_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE67_9PHAE) HSP 1 Score: 334 bits (857), Expect = 2.360e-104 Identity = 182/221 (82.35%), Postives = 193/221 (87.33%), Query Frame = 1 Query: 1 LSRALFRAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVKEHSGVRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDFARLLMARKTG---DVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHESAVEEIMTMLDLDAVGSVSFEEFLKIIRWDP 654 LSRALFRAKNVVRAVHSV++R L PGEAVFRQGD G SLFTV EGEL+VVKEHSGV +VA+L PGS FGEMALMT+QPRSASVVC+A EGGC VDEISGDDFARLLMAR+TG DVMRMLRARQFRHGVYKLLTELGSEATFTD+ ELRQVFDR DT KSG L+L ELKAAF RADPLL ESAVEEIMTMLDLDAVGSVSF+EFLKIIRWDP Sbjct: 925 LSRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLPPGSLFGEMALMTAQPRSASVVCAA--EGGCAVDEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFTDE-------ELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWDP 1136
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.540e-55 Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 1 Query: 4 SRALFRAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVKEHSGVR-HSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDFARLLMARKTG---DVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHESAVEEIMTMLDLDAVGSVSFEEFLKIIRWDP 654 SR + R K ++RA+++V R +R GE V RQG+ G S++T+ +G LDV+KE + +VA L PGS+FGEMA++ QPR+A+V CS CE CV+DE+SG +F +LLM+R + DV +++RARQFRHGVYKLL D + ELR VFD VD D SG++ L EL A R D L E V EI+ +LDLDA ++SFEEF+KII +DP Sbjct: 528 SRQMVRTKALLRALNTVRRLKVRGGEVVVRQGEVGKSMYTIVDGNLDVIKESPPLAPRTVAVLKPGSYFGEMAVLLKQPRNATVACSRGCEW-CVIDEVSGAEFLKLLMSRPSSFRRDVQQLMRARQFRHGVYKLLAAQEVAVPSLDSRTTFSTEELRAVFDAVDVDDSGEIELSELTEALFRVDSGLTEEGVREIIAILDLDASNTISFEEFVKIISFDP 747
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: D8LCM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM7_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.590e-48 Identity = 110/218 (50.46%), Postives = 122/218 (55.96%), Query Frame = 1 Query: 1 LSRALFRAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVKEHSGVRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDFARLLMARKTGDVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHESAVEEIMTMLDLDAVGSVSFEEFLKIIRWDP 654 LSRALFRAKNVVRAVHSV++R L PGEAVFRQGD G SLFTV EGEL+VVKEHSGV +V +LSPGS +A CS S LG+ F ++ E T KSG L+L ELKAA RADPLLHESAVEEIMTMLDL+AVGSVSF+EFLKIIRWDP Sbjct: 57 LSRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVVRLSPGS-----------SGTACTRCSHS----------------------------------------------LGARRPFRTRSCGRSSAE---------TAKSGTLSLAELKAALLRADPLLHESAVEEIMTMLDLNAVGSVSFQEFLKIIRWDP 208
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: D7FSY6_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY6_ECTSI) HSP 1 Score: 112 bits (279), Expect = 7.530e-25 Identity = 84/209 (40.19%), Postives = 114/209 (54.55%), Query Frame = 1 Query: 7 RALFRAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDV-VKEHSGVRHS---------VAQLSPGSFFGEMALMTSQPRSASVVCSASC---EGG---------CVVDEISGDDFARLLMARKT--GDVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHE 561 R + RAK ++RAV S+++R L G AV +QGD G S++TV EG+LDV K G + VA LS G FGEMALM QPRSA+VVCS+ EGG CVV+EI G+DF R+L + + ++R R FR + LLT G+E + ++R F+ VDTDKSG L +E+ A + + L E Sbjct: 456 RDISRAKTLLRAVGSITQRRLPAGSAVVQQGDLGDSMYTVVEGKLDVRAKGREGEGNGRAGHPYGDKVASLSAGDVFGEMALMLKQPRSATVVCSSPTLPGEGGGTDRVPGGFCVVNEIKGEDFVRMLKQSDSFLKSMKVIMRTRLFRRAML-LLTAAGTETL--------SKEKMRAAFEMVDTDKSGYLDANEVLEALKKLESSLGE 655
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: A0A1Z5K2I9_FISSO (cGMP-dependent protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2I9_FISSO) HSP 1 Score: 99.4 bits (246), Expect = 2.040e-20 Identity = 72/216 (33.33%), Postives = 111/216 (51.39%), Query Frame = 1 Query: 7 RALFRAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGE---GELDVVKEHSGVRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDFARLLMARKTGDVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHESAVEEIMTMLDLDAVGSVSFEEFLKIIR 645 R L AKN++R ++ R+ GE V+++GDPG S+F V + GEL V H+G V + PG FGE +L+ +PRS++V C + C + E+ +DF L +A T ++ A FR+ K L + +A + +L + F D DKSG L LDE++ R DP + ++ +D+D G VSFEEF ++ R Sbjct: 642 RQLQYAKNLLRLQKNIIPRTYTKGEVVYKEGDPGTSMFRVDDEDGGELHV--SHNGTL--VHKYFPGDSFGESSLLFKRPRSSTVECVSDV---CRLSEMQAEDF--LAVAESTPEM-----AASFRNICRKRLFKKAVKAYSLSKKRGLTDDDLVKAFHESDADKSGSLNLDEVRQLMHRMDPNFPIEEIVALLKFVDVDEDGQVSFEEFRRLFR 843
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: A0A7S2RFQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFQ5_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.060e-17 Identity = 57/208 (27.40%), Postives = 109/208 (52.40%), Query Frame = 1 Query: 19 RAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVKEHSGVRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDFARLLMARKTGDVMRMLRARQFRHGVYKLLT-ELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHESAVEEIMTMLDLDAVGSVSFEEFLKI 639 RAK+++R ++ + G+ +FR+G+ G L+ + +G+++++ + ++ + G GE +L+ ++PR++S VC + C+V E+ DF + + V + +R R K + E+ + T+ LR+VFD VD D SGDL+LDE++ D E ++EI+ +DL+ G ++F+EF +I Sbjct: 61 RAKSILRIQKNLREFKAKKGDYLFRKGEEGDKLYILEKGQINILGDDG---KTIFTVKEGDLCGEHSLVMARPRNSSAVCVSD---ECIVYEMKARDFYAIY--NSSSHVKKSIRELCLRREFQKAVVHEMKNHFPSTEN--------LRKVFDTVDEDHSGDLSLDEIRKFMISFDSSFSEDEIQEIVEAMDLNESGKINFDEFKQI 252
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: A0A7S3KX92_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KX92_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 6.610e-15 Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 1 Query: 43 VHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVKEHSG------VRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDF----ARLLMARKTGDVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSR-ADPLLHESAVEEIMTMLDLDAVGSVSFEEFL 633 + S+ R PG+ VF +G G SLF V +G DV+ + + + V Q+ GS FGE+AL+ S PR+A++ VV E+ DF AR ++ K ++ R +FR +L + D +R L +VF ++DTD SG + + EL +R A + V +M MLD D+ GS+ EFL Sbjct: 52 MQSLQVRRYYPGDVVFYKGTEGTSLFFVQQGTFDVIVGENNADPADPMSYRVDQIQSGSVFGEIALLLSMPRTATICAHTE----AVVHELQRSDFEAVAARSIVLNKRLQAIKEERFVRFRK-------DLEAACFNPDNLEPKQRAYLMEVFKQIDTDGSGAIDVAELAVMLTRLAGRFFSDEQVTAMMDMLDQDSNGSIEAPEFL 248
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: A0A7S2L6K5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L6K5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.010e-14 Identity = 59/209 (28.23%), Postives = 103/209 (49.28%), Query Frame = 1 Query: 19 RAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVKEHSGVRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASCEGGCVVDEISGDDFARLLMARK--TGDVMRMLRARQFRHGVYKLLTELGSEATFTDQASKHERHELRQVFDRVDTDKSGDLTLDELKAAFSRADPLLHESAVEEIMTMLDLDAVGSVSFEEFLKI 639 RAK +++ + + + + GE ++++GDPG SLF V +G +D+ S H V + + G+F GE +L+T + R+ + C + CV + G DF +L+ A + M+ R F+ V + LG E + D R+ F+ VD +K G L +++ D + V+ +M LDL G V ++EF+K+ Sbjct: 267 RAKALLKLQNGMKSETFKRGETLYKEGDPGDSLFIVEDGVVDI----STQGHQVIKATEGNFCGEHSLLTGRKRNTTATCISD---ECVALRMLGRDFRQLMDAAPHVKESLTDMMNRRDFKKAV---VLRLGHEFPYDDP---------RKAFNAVDINKRGFLKHEDIAHIMRSMDEDYTDQEVDMMMHTLDLSRDGKVLYDEFVKV 456
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Match: A0A1G0NPS4_9BACT (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A1G0NPS4_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 3.190e-13 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 52 VSRRSLRPGEAVFRQGDPGLSLFTVGEGELDV-VKEHSGVRHSVAQLSPGSFFGEMALMTSQPRSASVVCSASC 270 V +R + GE VF QGDPGL ++ + EGE+ + + EH G +A L+ G FFGE+AL+ PRSAS VC C Sbjct: 50 VHKREYKAGEPVFYQGDPGLGMYIIQEGEVSIRIAEHEGEDKELAVLAEGDFFGELALLDESPRSASAVCHTDC 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10289.302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10289.302.1 >prot_H-canaliculatus_F_contig10289.302.1 ID=prot_H-canaliculatus_F_contig10289.302.1|Name=mRNA_H-canaliculatus_F_contig10289.302.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=219bp LSRALFRAKNVVRAVHSVSRRSLRPGEAVFRQGDPGLSLFTVGEGELDVVback to top mRNA from alignment at H-canaliculatus_F_contig10289:2673..4959- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10289.302.1 ID=mRNA_H-canaliculatus_F_contig10289.302.1|Name=mRNA_H-canaliculatus_F_contig10289.302.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2287bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10289:2673..4959- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10289:2673..4959- >mRNA_H-canaliculatus_F_contig10289.302.1 ID=mRNA_H-canaliculatus_F_contig10289.302.1|Name=mRNA_H-canaliculatus_F_contig10289.302.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1314bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10289:2673..4959- (Hapterophycus canaliculatus Oshoro5f female)back to top |