mRNA_H-canaliculatus_F_contig10272.287.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI) HSP 1 Score: 515 bits (1326), Expect = 4.560e-170 Identity = 254/284 (89.44%), Postives = 264/284 (92.96%), Query Frame = 1 Query: 4 GGSKKRGIKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKEKAIEGAKKAVAAAAAEKRKPEPEQVNLAEQVIAKDETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 GGSKKRG+KPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHL+PREFVT+MQERR+KEKAIE AKK V+ A +EKRKP+PE LAEQ IAKDETEEGQ++QECEVLDTRQTFLNLCQGNHYQFDMLRR KHSSMMVLYHLCNPDVPKFLSTCS CYKEIHSGDRYHCE CTDFDLCK+CYK HPHPLK IPVRPAAQQQK LSPAQREERQRHIKLHMQLLQHASTCEDR CQSKNCSRMKNLLTHGASC IRAQGGCGVCKRIWALLQIHARQCKKDRC P Sbjct: 1036 GGSKKRGVKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLRPREFVTQMQERRAKEKAIEAAKKTVSTAVSEKRKPDPEMAKLAEQAIAKDETEEGQSSQECEVLDTRQTFLNLCQGNHYQFDMLRRGKHSSMMVLYHLCNPDVPKFLSTCSNCYKEIHSGDRYHCEVCTDFDLCKECYKAVPHPHPLKPIPVRPAAQQQKHLSPAQREERQRHIKLHMQLLQHASTCEDRNCQSKNCSRMKNLLTHGASCTIRAQGGCGVCKRIWALLQIHARQCKKDRCSVP 1319
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 382 bits (980), Expect = 9.470e-118 Identity = 207/281 (73.67%), Postives = 215/281 (76.51%), Query Frame = 1 Query: 13 KKRGIKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKEKAIEGAKKAVAAAAAEKRKPEPEQVNLAEQVIAKDETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 KKRG+KPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHL+PRE EKAIE AKKAV+ A +EKRKP+PE V LAEQ IAKDETEEGQ++QECEVL YHLCNPDVPKFLSTCS CYKEIHSGDRYHCE +CYK HPHPLK IPVRPAAQQQK LSPAQREERQRHIKLHMQLLQHASTCEDR CQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRC P Sbjct: 1977 KKRGVKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLRPRE-----------EKAIEAAKKAVSTAMSEKRKPDPEMVKLAEQPIAKDETEEGQSSQECEVL-------------------------------YHLCNPDVPKFLSTCSNCYKEIHSGDRYHCE---------ECYKAVPHPHPLKPIPVRPAAQQQKHLSPAQREERQRHIKLHMQLLQHASTCEDRNCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCSVP 2206
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A835Z331_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z331_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.170e-77 Identity = 144/286 (50.35%), Postives = 171/286 (59.79%), Query Frame = 1 Query: 55 DPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKEKAIEGAKKAVAAAAAEKRKPEPEQVNLAEQVIAKDETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRH------------------IKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGG-CGVCKRIWALLQIHARQCKKDRCVPP 855 DPLM +L I+ PMK SFIVA+LKPR FV M++ + + P+ + V LA + +DETEE + Q E+ DTRQ FLNLCQGNHYQFD LRR+KHSSMMVLYHL PD PKFLSTCS C +EI +G+RY C C +F+LC +C HPH L+AIPV+ A ++ + I LHMQLL HASTC D C S NCSRMK LL HG SC RAQG C VCKR++ALL IHARQCKKD C P Sbjct: 375 DPLMQRLGEIIGPMKGSFIVAYLKPRSFVKAMEQTKGQA-------------------PDAQLVQLAATPLERDETEETEENQFSEIFDTRQAFLNLCQGNHYQFDQLRRSKHSSMMVLYHLSTPDAPKFLSTCSLCQREIVAGNRYQCTVCENFELCSECAPTAGHPHRLRAIPVKGKADEKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIMLHMQLLTHASTCVDAACPSTNCSRMKALLAHGQSCPARAQGAQCDVCKRVFALLSIHARQCKKDGCSVP 641
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A7S2KCF1_9STRA (Histone acetyltransferase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KCF1_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.890e-77 Identity = 116/187 (62.03%), Postives = 139/187 (74.33%), Query Frame = 1 Query: 304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYK---LQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 +CE L+ RQ FLNLCQGNHYQFD LRRAKH+SMMVL+HL N D PKF+ C+ C +EI G RYHC TC DFD+C +C + + +HPHPL+AIPV QQ L+P QR+ERQR I+LHM LL HASTC +C S NC++MK LL HG C I+A GGC VCKRIWALLQIHA+QCK++ C P Sbjct: 36 DCEFLNNRQLFLNLCQGNHYQFDSLRRAKHTSMMVLWHLHNRDAPKFVQQCALCSREILQGMRYHCPTCADFDMCNECRRNPNIPRHPHPLQAIPV---GSQQSALTPEQRKERQRSIQLHMTLLLHASTCRSTECSSANCAKMKGLLKHGTQCKIKANGGCNVCKRIWALLQIHAKQCKQENCPVP 219
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A7S2FSK6_9STRA (Histone acetyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSK6_9STRA) HSP 1 Score: 240 bits (612), Expect = 2.600e-74 Identity = 118/186 (63.44%), Postives = 133/186 (71.51%), Query Frame = 1 Query: 304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKL--QQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 E E DTRQ FLNLCQGNHYQFD LRRAKH+SMM LYH+ NPD+PKFL CSQC EI++G RY C TCTDF LC DC QHPH LK + V+ A Q L+ QR RQR I LHMQLLQHAS C C S NC +MKNLL HG+ C+ + QGGC VC+RIWALLQIHARQC++D C P Sbjct: 106 ESEFFDTRQQFLNLCQGNHYQFDSLRRAKHTSMMALYHIHNPDMPKFLQQCSQCGLEINAGYRYDCPTCTDFHLCGDCCHQFGSQHPHKLKRVAVQSEANTQ--LTEEQRRARQRSISLHMQLLQHASGCNSSACPSANCEKMKNLLAHGSKCSTKVQGGCNVCRRIWALLQIHARQCRRDTCAVP 289
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A7S2R3Z8_9STRA (Histone acetyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Z8_9STRA) HSP 1 Score: 247 bits (630), Expect = 8.440e-71 Identity = 120/187 (64.17%), Postives = 143/187 (76.47%), Query Frame = 1 Query: 304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYK---LQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 +CE L+ RQ FLNLCQGNHYQFDMLRRAKHSSMMVL+HL N D PKF+ C+ C +EI +G RYHC TC D+D+C +C +HPH LK IPV A+ QQ +L+ AQR+ERQR I+LHM LLQHA+TC KC S NC++MK LL HGA C I+A GGC VCKRIWALLQIHARQCK+++C P Sbjct: 1294 DCEFLNNRQAFLNLCQGNHYQFDMLRRAKHSSMMVLWHLHNRDAPKFVQQCAVCSREILTGHRYHCLTCADYDICSECLSNPNTPRHPHQLKQIPV--ASGQQSELTEAQRKERQRSIQLHMTLLQHAATCVSPKCPSANCTKMKGLLKHGAHCQIKATGGCHVCKRIWALLQIHARQCKQEQCPVP 1478
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: K0RAM4_THAOC (Histone acetyltransferase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAM4_THAOC) HSP 1 Score: 238 bits (607), Expect = 1.630e-69 Identity = 114/187 (60.96%), Postives = 139/187 (74.33%), Query Frame = 1 Query: 304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYK---LQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 +C+ L+ RQ FLNLCQGNHYQFD LRRAKH+SMMVL+HL N + PKF++ C+ C +EI G R HC TC DFD C +C + + +HPHPL AIPV A Q+ L+P QR+ER+R I+LHM LL HASTC KC S NC++MK LL HG+ C ++AQGGC +CKRIWALLQIHARQCK D C P Sbjct: 547 DCDFLNNRQAFLNLCQGNHYQFDTLRRAKHTSMMVLWHLHNREAPKFVTQCAICSREILQGKRLHCPTCADFDQCIECLRNPAVPKHPHPLTAIPVSGA---QQTLTPEQRKERKRSIQLHMTLLLHASTCRSPKCNSANCAKMKGLLKHGSQCKVKAQGGCNICKRIWALLQIHARQCKTDNCPVP 730
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A1Z5JQN1_FISSO (Histone acetyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQN1_FISSO) HSP 1 Score: 240 bits (613), Expect = 1.620e-68 Identity = 117/187 (62.57%), Postives = 137/187 (73.26%), Query Frame = 1 Query: 304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCY---KLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 +CE L+ RQ FLNLCQGNHYQFD +RRAKHSSMMVL+HL N D PKF+ C+ C +EI +G RYHC TC DFD C +C K+ +HPHPLK I V QQ L+ QR+ERQR I+LHM LLQHA+TC + KC S NC++MK LL HG+ C I+A GGC VCKRIWALLQIHARQCK C P Sbjct: 1334 DCEFLNNRQAFLNLCQGNHYQFDTIRRAKHSSMMVLWHLHNRDAPKFVQQCATCSREILTGVRYHCPTCADFDQCHECVSNSKMPRHPHPLKPIAV--GNGQQSDLTEEQRKERQRSIQLHMTLLQHAATCSNAKCPSANCTKMKGLLKHGSQCQIKATGGCNVCKRIWALLQIHARQCKTVNCAVP 1518
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A8J2ST16_9STRA (Histone acetyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST16_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.670e-68 Identity = 148/310 (47.74%), Postives = 187/310 (60.32%), Query Frame = 1 Query: 16 KRGIKPE---EAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKE---KAIEGAK--KAVAAAAAEKRKPEPEQVNLAEQVIAK-------------------DETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPA---AQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 +RG++ + E + D L+ ++ I+ PMK +FIVA+L+PR F M R KE GA+ +A + + KP V+ Q AK DETE+ T E E DTRQ FLNLCQGNHYQFD LRRAKH+SMM LYH NPDVPKFL TCS C +I+SG Y E TDF LC++CYK + H P R + Q QL+ QR +R R I+LHMQLLQHAS C +++C S NC++MKNLL HGA+C R QGGC +C+RIWALLQIHARQC+++ CV P Sbjct: 972 QRGLRSDGSVEEELGTDSLIVRMGKILEPMKDAFIVAYLQPRIFACAMGIRHKKELNNSNQHGAEIQRAPSNLRVGQTKPNSPGVDKTSQSAAKANINDPEARDQRINRERHFDETEDKDETIESEFYDTRQQFLNLCQGNHYQFDDLRRAKHTSMMSLYHTHNPDVPKFLVTCSNCNIDINSGCCYTSEQDTDFHLCQECYK-KMHKMFSDKFPFRRSIVGGDSQAQLTEEQRRDRHRSIQLHMQLLQHASGCRNQQCPSANCNKMKNLLKHGANCTTRVQGGCAICRRIWALLQIHARQCRREACVVP 1280
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: F0YJM9_AURAN (Histone acetyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJM9_AURAN) HSP 1 Score: 225 bits (574), Expect = 2.870e-66 Identity = 116/198 (58.59%), Postives = 139/198 (70.20%), Query Frame = 1 Query: 274 DETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCY----KLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855 DETE+ E E DTRQ FLNLCQGNHYQFD LRRAKH+SMM LYHL NPDVPKFL TCS C +I+ G Y+ E +F LC+DCY K+ P + V Q QL+ QR +RQR I+LHMQLLQHAS C +++C S NC++MKNLL HGA+C R QGGC +C+RIWALLQIHARQC++D C+ P Sbjct: 333 DETEDTDEIIESEFYDTRQQFLNLCQGNHYQFDDLRRAKHTSMMSLYHLHNPDVPKFLVTCSNCNMDINLGYCYNSEKDPEFHLCQDCYQKTHKVFADKSPFRRSLV--GGDSQAQLTEEQRRDRQRSIQLHMQLLQHASGCRNQQCPSANCNKMKNLLKHGATCMTRVQGGCAICRRIWALLQIHARQCRRDTCMVP 528 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10272.287.1 >prot_H-canaliculatus_F_contig10272.287.1 ID=prot_H-canaliculatus_F_contig10272.287.1|Name=mRNA_H-canaliculatus_F_contig10272.287.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=285bp SGGSKKRGIKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMback to top mRNA from alignment at H-canaliculatus_F_contig10272:743..4686+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10272.287.1 ID=mRNA_H-canaliculatus_F_contig10272.287.1|Name=mRNA_H-canaliculatus_F_contig10272.287.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3944bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10272:743..4686+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10272:743..4686+ >mRNA_H-canaliculatus_F_contig10272.287.1 ID=mRNA_H-canaliculatus_F_contig10272.287.1|Name=mRNA_H-canaliculatus_F_contig10272.287.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1710bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10272:743..4686+ (Hapterophycus canaliculatus Oshoro5f female)back to top |