mRNA_H-canaliculatus_F_contig10272.287.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10272.287.1
Unique NamemRNA_H-canaliculatus_F_contig10272.287.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI)

HSP 1 Score: 515 bits (1326), Expect = 4.560e-170
Identity = 254/284 (89.44%), Postives = 264/284 (92.96%), Query Frame = 1
Query:    4 GGSKKRGIKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKEKAIEGAKKAVAAAAAEKRKPEPEQVNLAEQVIAKDETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            GGSKKRG+KPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHL+PREFVT+MQERR+KEKAIE AKK V+ A +EKRKP+PE   LAEQ IAKDETEEGQ++QECEVLDTRQTFLNLCQGNHYQFDMLRR KHSSMMVLYHLCNPDVPKFLSTCS CYKEIHSGDRYHCE CTDFDLCK+CYK   HPHPLK IPVRPAAQQQK LSPAQREERQRHIKLHMQLLQHASTCEDR CQSKNCSRMKNLLTHGASC IRAQGGCGVCKRIWALLQIHARQCKKDRC  P
Sbjct: 1036 GGSKKRGVKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLRPREFVTQMQERRAKEKAIEAAKKTVSTAVSEKRKPDPEMAKLAEQAIAKDETEEGQSSQECEVLDTRQTFLNLCQGNHYQFDMLRRGKHSSMMVLYHLCNPDVPKFLSTCSNCYKEIHSGDRYHCEVCTDFDLCKECYKAVPHPHPLKPIPVRPAAQQQKHLSPAQREERQRHIKLHMQLLQHASTCEDRNCQSKNCSRMKNLLTHGASCTIRAQGGCGVCKRIWALLQIHARQCKKDRCSVP 1319          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 9.470e-118
Identity = 207/281 (73.67%), Postives = 215/281 (76.51%), Query Frame = 1
Query:   13 KKRGIKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKEKAIEGAKKAVAAAAAEKRKPEPEQVNLAEQVIAKDETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            KKRG+KPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHL+PRE           EKAIE AKKAV+ A +EKRKP+PE V LAEQ IAKDETEEGQ++QECEVL                               YHLCNPDVPKFLSTCS CYKEIHSGDRYHCE         +CYK   HPHPLK IPVRPAAQQQK LSPAQREERQRHIKLHMQLLQHASTCEDR CQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRC  P
Sbjct: 1977 KKRGVKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLRPRE-----------EKAIEAAKKAVSTAMSEKRKPDPEMVKLAEQPIAKDETEEGQSSQECEVL-------------------------------YHLCNPDVPKFLSTCSNCYKEIHSGDRYHCE---------ECYKAVPHPHPLKPIPVRPAAQQQKHLSPAQREERQRHIKLHMQLLQHASTCEDRNCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCSVP 2206          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A835Z331_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z331_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.170e-77
Identity = 144/286 (50.35%), Postives = 171/286 (59.79%), Query Frame = 1
Query:   55 DPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKEKAIEGAKKAVAAAAAEKRKPEPEQVNLAEQVIAKDETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRH------------------IKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGG-CGVCKRIWALLQIHARQCKKDRCVPP 855
            DPLM +L  I+ PMK SFIVA+LKPR FV  M++ + +                    P+ + V LA   + +DETEE +  Q  E+ DTRQ FLNLCQGNHYQFD LRR+KHSSMMVLYHL  PD PKFLSTCS C +EI +G+RY C  C +F+LC +C     HPH L+AIPV+  A ++ +                              I LHMQLL HASTC D  C S NCSRMK LL HG SC  RAQG  C VCKR++ALL IHARQCKKD C  P
Sbjct:  375 DPLMQRLGEIIGPMKGSFIVAYLKPRSFVKAMEQTKGQA-------------------PDAQLVQLAATPLERDETEETEENQFSEIFDTRQAFLNLCQGNHYQFDQLRRSKHSSMMVLYHLSTPDAPKFLSTCSLCQREIVAGNRYQCTVCENFELCSECAPTAGHPHRLRAIPVKGKADEKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIMLHMQLLTHASTCVDAACPSTNCSRMKALLAHGQSCPARAQGAQCDVCKRVFALLSIHARQCKKDGCSVP 641          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A7S2KCF1_9STRA (Histone acetyltransferase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KCF1_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.890e-77
Identity = 116/187 (62.03%), Postives = 139/187 (74.33%), Query Frame = 1
Query:  304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYK---LQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            +CE L+ RQ FLNLCQGNHYQFD LRRAKH+SMMVL+HL N D PKF+  C+ C +EI  G RYHC TC DFD+C +C +   + +HPHPL+AIPV     QQ  L+P QR+ERQR I+LHM LL HASTC   +C S NC++MK LL HG  C I+A GGC VCKRIWALLQIHA+QCK++ C  P
Sbjct:   36 DCEFLNNRQLFLNLCQGNHYQFDSLRRAKHTSMMVLWHLHNRDAPKFVQQCALCSREILQGMRYHCPTCADFDMCNECRRNPNIPRHPHPLQAIPV---GSQQSALTPEQRKERQRSIQLHMTLLLHASTCRSTECSSANCAKMKGLLKHGTQCKIKANGGCNVCKRIWALLQIHAKQCKQENCPVP 219          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A7S2FSK6_9STRA (Histone acetyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSK6_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.600e-74
Identity = 118/186 (63.44%), Postives = 133/186 (71.51%), Query Frame = 1
Query:  304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKL--QQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            E E  DTRQ FLNLCQGNHYQFD LRRAKH+SMM LYH+ NPD+PKFL  CSQC  EI++G RY C TCTDF LC DC      QHPH LK + V+  A  Q  L+  QR  RQR I LHMQLLQHAS C    C S NC +MKNLL HG+ C+ + QGGC VC+RIWALLQIHARQC++D C  P
Sbjct:  106 ESEFFDTRQQFLNLCQGNHYQFDSLRRAKHTSMMALYHIHNPDMPKFLQQCSQCGLEINAGYRYDCPTCTDFHLCGDCCHQFGSQHPHKLKRVAVQSEANTQ--LTEEQRRARQRSISLHMQLLQHASGCNSSACPSANCEKMKNLLAHGSKCSTKVQGGCNVCRRIWALLQIHARQCRRDTCAVP 289          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A7S2R3Z8_9STRA (Histone acetyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Z8_9STRA)

HSP 1 Score: 247 bits (630), Expect = 8.440e-71
Identity = 120/187 (64.17%), Postives = 143/187 (76.47%), Query Frame = 1
Query:  304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYK---LQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            +CE L+ RQ FLNLCQGNHYQFDMLRRAKHSSMMVL+HL N D PKF+  C+ C +EI +G RYHC TC D+D+C +C       +HPH LK IPV  A+ QQ +L+ AQR+ERQR I+LHM LLQHA+TC   KC S NC++MK LL HGA C I+A GGC VCKRIWALLQIHARQCK+++C  P
Sbjct: 1294 DCEFLNNRQAFLNLCQGNHYQFDMLRRAKHSSMMVLWHLHNRDAPKFVQQCAVCSREILTGHRYHCLTCADYDICSECLSNPNTPRHPHQLKQIPV--ASGQQSELTEAQRKERQRSIQLHMTLLQHAATCVSPKCPSANCTKMKGLLKHGAHCQIKATGGCHVCKRIWALLQIHARQCKQEQCPVP 1478          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: K0RAM4_THAOC (Histone acetyltransferase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAM4_THAOC)

HSP 1 Score: 238 bits (607), Expect = 1.630e-69
Identity = 114/187 (60.96%), Postives = 139/187 (74.33%), Query Frame = 1
Query:  304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYK---LQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            +C+ L+ RQ FLNLCQGNHYQFD LRRAKH+SMMVL+HL N + PKF++ C+ C +EI  G R HC TC DFD C +C +   + +HPHPL AIPV  A   Q+ L+P QR+ER+R I+LHM LL HASTC   KC S NC++MK LL HG+ C ++AQGGC +CKRIWALLQIHARQCK D C  P
Sbjct:  547 DCDFLNNRQAFLNLCQGNHYQFDTLRRAKHTSMMVLWHLHNREAPKFVTQCAICSREILQGKRLHCPTCADFDQCIECLRNPAVPKHPHPLTAIPVSGA---QQTLTPEQRKERKRSIQLHMTLLLHASTCRSPKCNSANCAKMKGLLKHGSQCKVKAQGGCNICKRIWALLQIHARQCKTDNCPVP 730          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A1Z5JQN1_FISSO (Histone acetyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQN1_FISSO)

HSP 1 Score: 240 bits (613), Expect = 1.620e-68
Identity = 117/187 (62.57%), Postives = 137/187 (73.26%), Query Frame = 1
Query:  304 ECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCY---KLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            +CE L+ RQ FLNLCQGNHYQFD +RRAKHSSMMVL+HL N D PKF+  C+ C +EI +G RYHC TC DFD C +C    K+ +HPHPLK I V     QQ  L+  QR+ERQR I+LHM LLQHA+TC + KC S NC++MK LL HG+ C I+A GGC VCKRIWALLQIHARQCK   C  P
Sbjct: 1334 DCEFLNNRQAFLNLCQGNHYQFDTIRRAKHSSMMVLWHLHNRDAPKFVQQCATCSREILTGVRYHCPTCADFDQCHECVSNSKMPRHPHPLKPIAV--GNGQQSDLTEEQRKERQRSIQLHMTLLQHAATCSNAKCPSANCTKMKGLLKHGSQCQIKATGGCNVCKRIWALLQIHARQCKTVNCAVP 1518          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: A0A8J2ST16_9STRA (Histone acetyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST16_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.670e-68
Identity = 148/310 (47.74%), Postives = 187/310 (60.32%), Query Frame = 1
Query:   16 KRGIKPE---EAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEMQERRSKE---KAIEGAK--KAVAAAAAEKRKPEPEQVNLAEQVIAK-------------------DETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPA---AQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            +RG++ +   E  +  D L+ ++  I+ PMK +FIVA+L+PR F   M  R  KE       GA+  +A +     + KP    V+   Q  AK                   DETE+   T E E  DTRQ FLNLCQGNHYQFD LRRAKH+SMM LYH  NPDVPKFL TCS C  +I+SG  Y  E  TDF LC++CYK + H       P R +      Q QL+  QR +R R I+LHMQLLQHAS C +++C S NC++MKNLL HGA+C  R QGGC +C+RIWALLQIHARQC+++ CV P
Sbjct:  972 QRGLRSDGSVEEELGTDSLIVRMGKILEPMKDAFIVAYLQPRIFACAMGIRHKKELNNSNQHGAEIQRAPSNLRVGQTKPNSPGVDKTSQSAAKANINDPEARDQRINRERHFDETEDKDETIESEFYDTRQQFLNLCQGNHYQFDDLRRAKHTSMMSLYHTHNPDVPKFLVTCSNCNIDINSGCCYTSEQDTDFHLCQECYK-KMHKMFSDKFPFRRSIVGGDSQAQLTEEQRRDRHRSIQLHMQLLQHASGCRNQQCPSANCNKMKNLLKHGANCTTRVQGGCAICRRIWALLQIHARQCRREACVVP 1280          
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Match: F0YJM9_AURAN (Histone acetyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJM9_AURAN)

HSP 1 Score: 225 bits (574), Expect = 2.870e-66
Identity = 116/198 (58.59%), Postives = 139/198 (70.20%), Query Frame = 1
Query:  274 DETEEGQATQECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLSTCSQCYKEIHSGDRYHCETCTDFDLCKDCY----KLQQHPHPLKAIPVRPAAQQQKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGASCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP 855
            DETE+     E E  DTRQ FLNLCQGNHYQFD LRRAKH+SMM LYHL NPDVPKFL TCS C  +I+ G  Y+ E   +F LC+DCY    K+     P +   V      Q QL+  QR +RQR I+LHMQLLQHAS C +++C S NC++MKNLL HGA+C  R QGGC +C+RIWALLQIHARQC++D C+ P
Sbjct:  333 DETEDTDEIIESEFYDTRQQFLNLCQGNHYQFDDLRRAKHTSMMSLYHLHNPDVPKFLVTCSNCNMDINLGYCYNSEKDPEFHLCQDCYQKTHKVFADKSPFRRSLV--GGDSQAQLTEEQRRDRQRSIQLHMQLLQHASGCRNQQCPSANCNKMKNLLKHGATCMTRVQGGCAICRRIWALLQIHARQCRRDTCMVP 528          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10272.287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPT9_ECTSI4.560e-17089.44Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KPY4_9PHAE9.470e-11873.67Histone acetyltransferase n=1 Tax=Ectocarpus sp. C... [more]
A0A835Z331_9STRA1.170e-7750.35Histone acetyltransferase n=1 Tax=Tribonema minus ... [more]
A0A7S2KCF1_9STRA2.890e-7762.03Histone acetyltransferase n=1 Tax=Skeletonema mari... [more]
A0A7S2FSK6_9STRA2.600e-7463.44Histone acetyltransferase n=1 Tax=Florenciella par... [more]
A0A7S2R3Z8_9STRA8.440e-7164.17Histone acetyltransferase n=1 Tax=Eucampia antarct... [more]
K0RAM4_THAOC1.630e-6960.96Histone acetyltransferase (Fragment) n=1 Tax=Thala... [more]
A0A1Z5JQN1_FISSO1.620e-6862.57Histone acetyltransferase n=2 Tax=Fistulifera sola... [more]
A0A8J2ST16_9STRA2.670e-6847.74Histone acetyltransferase n=1 Tax=Pelagomonas calc... [more]
F0YJM9_AURAN2.870e-6658.59Histone acetyltransferase n=1 Tax=Aureococcus anop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10272contigH-canaliculatus_F_contig10272:743..4686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score517.7
Seed ortholog evalue3.5e-144
Seed eggNOG ortholog2880.D8LPT9
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1778@2759
EC2.3.1.48
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCBP-type histone acetylase, zinc finger and Bromodomain protein
Ec32 orthologEc-18_002450.1
Exons7
Model size857
Cds size855
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928661.1500082-CDS-H-canaliculatus_F_contig10272:742..7941622928661.1500082-CDS-H-canaliculatus_F_contig10272:742..794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 743..794 +
1696845516.9015946-CDS-H-canaliculatus_F_contig10272:742..7941696845516.9015946-CDS-H-canaliculatus_F_contig10272:742..794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 743..794 +
1622928661.1625881-CDS-H-canaliculatus_F_contig10272:1331..14321622928661.1625881-CDS-H-canaliculatus_F_contig10272:1331..1432Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 1332..1432 +
1696845516.9120233-CDS-H-canaliculatus_F_contig10272:1331..14321696845516.9120233-CDS-H-canaliculatus_F_contig10272:1331..1432Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 1332..1432 +
1622928661.1989186-CDS-H-canaliculatus_F_contig10272:1815..19741622928661.1989186-CDS-H-canaliculatus_F_contig10272:1815..1974Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 1816..1974 +
1696845516.9231417-CDS-H-canaliculatus_F_contig10272:1815..19741696845516.9231417-CDS-H-canaliculatus_F_contig10272:1815..1974Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 1816..1974 +
1622928661.2181702-CDS-H-canaliculatus_F_contig10272:2232..23251622928661.2181702-CDS-H-canaliculatus_F_contig10272:2232..2325Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 2233..2325 +
1696845516.9338703-CDS-H-canaliculatus_F_contig10272:2232..23251696845516.9338703-CDS-H-canaliculatus_F_contig10272:2232..2325Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 2233..2325 +
1622928661.2320433-CDS-H-canaliculatus_F_contig10272:3194..33201622928661.2320433-CDS-H-canaliculatus_F_contig10272:3194..3320Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 3195..3320 +
1696845516.9433177-CDS-H-canaliculatus_F_contig10272:3194..33201696845516.9433177-CDS-H-canaliculatus_F_contig10272:3194..3320Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 3195..3320 +
1622928661.2471504-CDS-H-canaliculatus_F_contig10272:3824..40221622928661.2471504-CDS-H-canaliculatus_F_contig10272:3824..4022Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 3825..4022 +
1696845516.9523518-CDS-H-canaliculatus_F_contig10272:3824..40221696845516.9523518-CDS-H-canaliculatus_F_contig10272:3824..4022Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 3825..4022 +
1622928661.2649143-CDS-H-canaliculatus_F_contig10272:4560..46861622928661.2649143-CDS-H-canaliculatus_F_contig10272:4560..4686Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 4561..4686 +
1696845516.9607086-CDS-H-canaliculatus_F_contig10272:4560..46861696845516.9607086-CDS-H-canaliculatus_F_contig10272:4560..4686Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10272 4561..4686 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10272.287.1prot_H-canaliculatus_F_contig10272.287.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10272 743..4686 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10272.287.1

>prot_H-canaliculatus_F_contig10272.287.1 ID=prot_H-canaliculatus_F_contig10272.287.1|Name=mRNA_H-canaliculatus_F_contig10272.287.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=285bp
SGGSKKRGIKPEEAPIVGDPLMHKLAAIVSPMKSSFIVAHLKPREFVTEM
QERRSKEKAIEGAKKAVAAAAAEKRKPEPEQVNLAEQVIAKDETEEGQAT
QECEVLDTRQTFLNLCQGNHYQFDMLRRAKHSSMMVLYHLCNPDVPKFLS
TCSQCYKEIHSGDRYHCETCTDFDLCKDCYKLQQHPHPLKAIPVRPAAQQ
QKQLSPAQREERQRHIKLHMQLLQHASTCEDRKCQSKNCSRMKNLLTHGA
SCAIRAQGGCGVCKRIWALLQIHARQCKKDRCVPP
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mRNA from alignment at H-canaliculatus_F_contig10272:743..4686+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10272.287.1 ID=mRNA_H-canaliculatus_F_contig10272.287.1|Name=mRNA_H-canaliculatus_F_contig10272.287.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3944bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10272:743..4686+ (Hapterophycus canaliculatus Oshoro5f female)
AGCGGAGGGAGTAAGAAGAGAGGGATCAAGCCGGAGGAGGCGCCGATCGT TGGTGAGGGATCCATCCGTTTTTTGCCGATGAGTACTCCGGGAGTGCATC AAGATGCTGGGAAGCAGAAGCACCACCCACGTTGTTGCAAGCGTTTTGGT GTGTCGTGTATGGTGTGTGTGGGTCTTCCCTTGTCCGTCGCGGAAAATAA TCAAAATGGACTTGGTGTTGTAGCTCTAGGATGGCATGCACCTGTGTTCT CCTCTGTTCCCTGTATGTACACCTCTGTTCTCTCGACGCTCACATTCGCA CGCACTCAGAAATCTCTGTCTCTGTCTCTTTGTGTGTGTGTCTTCAGATC AATCCACGAACATTCGTTTGTCCTGTTGTAGCAATGAAAATCGCTGTGAT ACTCGACGCCAGCACGAGCTTGCCCGCCTCCTCTCTGCCGTCGTAGCGCG GGCGCACTCGCCTTACATGGACACCGCGGACAGTAGCGTGTGCGCAACCA GCCTTCTGTGTTCTCTCTCGTGCGTGCTTTCTTTCACGACTTTGTTGCCC TGCCTTTTTCTCATCCTCGGCCTGTGTGTGTGTGTTCAGGTGACCCGCTG ATGCACAAGCTGGCGGCGATTGTGTCTCCGATGAAGTCATCCTTCATCGT AGCGCACCTCAAGCCGAGGGAGTTCGTTACGGAGATGCAGGTGCGCAGGG CAGGGAGGTTGTGGCTTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC TCCCTCTCTGCTGGTTGCCTCCAGGCGTGCGCCGCGTGCGTTTCGCGTTC GGCCGTGGAGCGCCGTCTCCCAGATAGTCTACAGTCTGCTGGCTGTGATG CACGAGAGCATCGGCGTCGCAGCCAACTGAGCTCAAATGTGGTTGGTCGT TGGCGCGGAGTGGAAGAGCCAGGCGTGTTGCCGCTCCGCTGGCGGCTGCT TTTTCTCTCCCTTGTCTCCCTTTCGGGCACGAATTTCTTCGTCCTCCGCC CTCTACTTGTAACCACCTTCGATTTCCCCCTTCCCTCTTTTCATTCCTTA CACTCCTTTCGCTCCCTTGGCAGGAGCGGCGGTCGAAGGAGAAGGCGATC GAAGGGGCGAAGAAGGCCGTCGCGGCGGCGGCAGCAGAGAAGAGAAAACC CGAGCCTGAGCAGGTGAACCTGGCGGAGCAGGTGATCGCCAAGGACGAGA CGGAGGAAGGACAGGCGACTCAGGAGTGCGAGGTATGTCGTCGTCGTCGT CGTTGTTGTTGTTGTTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGT TGGTGTTGGTGTTGGTGTCGATGCTTTGTATCATCGTCGCTGTTGACGTC TTCGTTATCGCCGTTGATTTGTTAGTAATACAATTATGTGGAGTTGTTGT CGTTGGTGTTGTTATTGCTGCTGTTGCTGGCGTTGTTGCTGTTGCCCACG CGTCTATCTCCGCTGTGGCACGCTCTGTTGGCCGCTTCAGGTGCTGGACA CGAGGCAGACCTTCCTCAACTTGTGCCAGGGCAACCACTACCAGTTCGAC ATGCTTCGAAGAGCGAAGCACTCGTCGATGATGGTGAGTCAAGCCAGACT AGTCACACAGACCAGTCACACCCATCTTGGTCTTGGTCTTGGTCCTGGTC TGACTAGTTGCGCGGTACGTCCCCCTTACACCCTCCTGTCGCGCACCTAT GATACGCGTATGTCGTGTGCATCTCGTTCGGCTGTCGCAGTCTGTCTGCT TCTCTGTTTGCCCCCCTCCGAGCGTCGGTGACATGAAATGTGACATGTTT TAAGGAGGCTTTCGACCGCTGCCTGCTCGATGTTCCCGGTCGGTGCCAGC GAGGTCGAAACTCTTTTCATCGGTCGGCTTGATCATCTGATTCTGGTTCT GCTTGTTCATTTTTTTTCTTTAGGGGGGGGGAGGCGGGCGGAGAGGAAGG TCCATCTGATTGAAACCGATGCACCCGTATTACGGGAGTGAGAGTGCAAT TTGCAACTCACTTAGCCAATCCACGCCACGCCACGCCACACCATACCATA CCGTACCATACCATACCATACCATGCCATACCATACCATACCACGCCACG CCACGCCACGCCGTCCTATTTTGTTGGTGTACTTGTACAGTATTAATAGT AGTGTGTGTGTGTATTTGGTGTTGCTACGGTCGCTCTCTATTAATAGCCT CCTACCTCACCCTGACCGTTCTCCATGATGCGCCGGGCCCCTCGGCCGTG GTGGTCACGAATTCCCTTAATCCTGAACTTTTTTTTTGTGGCCCTGATCC CCTTTGCCCCCCCCCCCAACACCCCAATTACTGTTTGCGGGATCCGCTTT CTCCTCTGTTTGTTTGTTTTTTGTCGTCCTTTGTACGTTGTTGTCTGTGT GTCGTGTTGTGCGCTACCGAAAAAATCCCCGGCGGCTTCGAAAAAAAAAC AGGTGCTCTATCACCTGTGCAATCCGGACGTGCCCAAGTTCCTGTCGACG TGCTCTCAGTGCTACAAGGAGATACACTCGGGGGACAGATACCACTGCGA GACTTGCACAGACTTCGACCTCTGCAAGGCAAGAGAGCCGCGAGATGCCA GCCGCTCATGCATTCATGCATGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTCGTTGTCGTTGTCGTTGTCGTTGTAAAGG AGGTATATTCAGGGGTACAGGGGATGGAATAGACGGGGTCGTTGAATACC ACCCCCTAGCTGAGCCTCGTTCCAGCCACCGCTTCCACAACCTGGCCGTG CCAGAGTTCGCCCTTCCCTTCCCCGCTCCCCACTCACGCTGCGATATTCT GCCGTGTATCGGCGTATCGTTCTTGGATCCCACCGCGAGGAATACCTCTC ACTCTGGTGCCGCGGCTATCAGCGTCAGGCTGCTTCCGCCTCGGCCGCTG CCGCCGCCGCTGTCGCTACTTCTGCTGCCCCTGGCTCCGCGTGTCTGAGC GCACTCCCAGTCATTCTCTCTCCATCGGGCGCTTGAAAGGACCCCCCCCT CCCGCGCCCTTTTTTTTCGCCACGCCCCGCAGGATTGCTACAAGCTCCAG CAGCACCCGCACCCTCTCAAGGCTATCCCGGTGCGGCCGGCGGCGCAGCA GCAGAAGCAGCTCAGCCCGGCCCAGCGCGAGGAGCGGCAGAGGCACATCA AGCTGCACATGCAGCTCCTGCAGCACGCGTCGACGTGCGAGGACCGCAAG TGTCAGTCCAAGAACTGCTCGCGGATGAAGGTGGGAGCCTTGGTTTTTGC ACGTCAAGTATCGACAAAAAAAAAAGATGAAAAGGAGAAGAGTCCGAAGG GGGTGTGCGGGCCGTTGGTGTTGGTGGTGCTGTGTGGCGCGTTTTGTCGA TCCTGAACCCGATCCCGTCGTCCCCCGGGGTTGCGCGAGTGCGCACGGCT TGTTGTTCGGCCGGTGGTTCAGTGTCGGGGTCGGCCGGTTTGCGTCGGGA GAATCCGGAGTCTCGTGCGTGCGGTGCGGCCCGTTGTGTTTGGCTTCCGT CGCTTGCGTTGCTTCCGACGTTTCGTTTTTGTTCTTGTGTCTCCCTTCAT CACGAGTCCTGTCTGTGGGTACGAACCTTGCCCTTGTCTCCGTCTCGGCT GGGTTGGGTCTCGTACGTCCCGTACGCCCCTGGTTCATCGTCGGCTCTCG CCGCCGACATGTCGTTATTGATCTTGTTCTTGTCCGTGCTCTTGTTGTCT TTGGTTGGGTCATGCTCACGAGTCCGTTCCTCGATTTCGCCCTCTGCTTC CTGGTCGCGTGTTTTCAGAACCTTCTGACGCACGGCGCGAGCTGCGCCAT CCGGGCGCAAGGCGGCTGTGGCGTGTGCAAGCGCATCTGGGCTCTGCTGC AGATCCACGCGAGGCAGTGCAAGAAGGACCGGTGCGTGCCCCCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10272:743..4686+

>mRNA_H-canaliculatus_F_contig10272.287.1 ID=mRNA_H-canaliculatus_F_contig10272.287.1|Name=mRNA_H-canaliculatus_F_contig10272.287.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1710bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10272:743..4686+ (Hapterophycus canaliculatus Oshoro5f female)
AGCGGAGGGAGTAAGAAGAGAGGGATCAAGCCGGAGGAGGCGCCGATCGT
TGAGCGGAGGGAGTAAGAAGAGAGGGATCAAGCCGGAGGAGGCGCCGATC
GTTGGTGACCCGCTGATGCACAAGCTGGCGGCGATTGTGTCTCCGATGAA
GTCATCCTTCATCGTAGCGCACCTCAAGCCGAGGGAGTTCGTTACGGAGA
TGCAGGTGACCCGCTGATGCACAAGCTGGCGGCGATTGTGTCTCCGATGA
AGTCATCCTTCATCGTAGCGCACCTCAAGCCGAGGGAGTTCGTTACGGAG
ATGCAGGAGCGGCGGTCGAAGGAGAAGGCGATCGAAGGGGCGAAGAAGGC
CGTCGCGGCGGCGGCAGCAGAGAAGAGAAAACCCGAGCCTGAGCAGGTGA
ACCTGGCGGAGCAGGTGATCGCCAAGGACGAGACGGAGGAAGGACAGGCG
ACTCAGGAGTGCGAGGAGCGGCGGTCGAAGGAGAAGGCGATCGAAGGGGC
GAAGAAGGCCGTCGCGGCGGCGGCAGCAGAGAAGAGAAAACCCGAGCCTG
AGCAGGTGAACCTGGCGGAGCAGGTGATCGCCAAGGACGAGACGGAGGAA
GGACAGGCGACTCAGGAGTGCGAGGTGCTGGACACGAGGCAGACCTTCCT
CAACTTGTGCCAGGGCAACCACTACCAGTTCGACATGCTTCGAAGAGCGA
AGCACTCGTCGATGATGGTGCTGGACACGAGGCAGACCTTCCTCAACTTG
TGCCAGGGCAACCACTACCAGTTCGACATGCTTCGAAGAGCGAAGCACTC
GTCGATGATGGTGCTCTATCACCTGTGCAATCCGGACGTGCCCAAGTTCC
TGTCGACGTGCTCTCAGTGCTACAAGGAGATACACTCGGGGGACAGATAC
CACTGCGAGACTTGCACAGACTTCGACCTCTGCAAGGTGCTCTATCACCT
GTGCAATCCGGACGTGCCCAAGTTCCTGTCGACGTGCTCTCAGTGCTACA
AGGAGATACACTCGGGGGACAGATACCACTGCGAGACTTGCACAGACTTC
GACCTCTGCAAGGATTGCTACAAGCTCCAGCAGCACCCGCACCCTCTCAA
GGCTATCCCGGTGCGGCCGGCGGCGCAGCAGCAGAAGCAGCTCAGCCCGG
CCCAGCGCGAGGAGCGGCAGAGGCACATCAAGCTGCACATGCAGCTCCTG
CAGCACGCGTCGACGTGCGAGGACCGCAAGTGTCAGTCCAAGAACTGCTC
GCGGATGAAGGATTGCTACAAGCTCCAGCAGCACCCGCACCCTCTCAAGG
CTATCCCGGTGCGGCCGGCGGCGCAGCAGCAGAAGCAGCTCAGCCCGGCC
CAGCGCGAGGAGCGGCAGAGGCACATCAAGCTGCACATGCAGCTCCTGCA
GCACGCGTCGACGTGCGAGGACCGCAAGTGTCAGTCCAAGAACTGCTCGC
GGATGAAGAACCTTCTGACGCACGGCGCGAGCTGCGCCATCCGGGCGCAA
GGCGGCTGTGGCGTGTGCAAGCGCATCTGGGCTCTGCTGCAGATCCACGC
GAGGCAGTGCAAGAAGGACCGGTGCGTGCCCCCCAACCTTCTGACGCACG
GCGCGAGCTGCGCCATCCGGGCGCAAGGCGGCTGTGGCGTGTGCAAGCGC
ATCTGGGCTCTGCTGCAGATCCACGCGAGGCAGTGCAAGAAGGACCGGTG
CGTGCCCCCC
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