mRNA_H-canaliculatus_F_contig10263.277.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: D7FVW7_ECTSI (ADH_zinc_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW7_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 5.190e-132 Identity = 293/528 (55.49%), Postives = 315/528 (59.66%), Query Frame = 3 Query: 114 GLPDTTVRVIAADFTSVDPDALFPAPDDAGHRRANDEKIAPATAAAAFDGNNRPPHVLVGCCLADLLPPAELVRALERLASGCRVGGGGGAAARGCLVYLPITFVGKTSMIPPAPQEGLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697 GLP+TTV VI ADFTSVD ALFP D A AN ++I PA+ PHVLVGCCLADLL P +LV ALERLA G G GG CLVYLPITF GKT MIP APQEG +PSDEAVL AYD CLR+ QGH TCL+TLLQTI E GGD MISSPSPWRVS G D A D+E+L G E + AD PGWVRRAR RAPVL+A+N DLLFRLR GXXXXXXXXXXXXXXXXXXXXXXXX Q + G P G +S D + AA VVR NAFLEFVAPGKVEVRHEELDEE AVGEGQVLVEA+CSSISSGTELKVFRGDFDS+SELDTTIKGMAGESMSYPL+YGYSLVGRV+KCG GVDP+KFLGKLVF FSPHS+ VVADADGVMLVPE Sbjct: 388 GLPETTVCVIPADFTSVDLAALFPR-DTASKDIANPDEITPASR----------PHVLVGCCLADLLAPTDLVGALERLAGGSSSGDGG------CLVYLPITFAGKTRMIPSAPQEGFVPSDEAVLEAYDTCLREEQGHFTCLDTLLQTIEEHGGDVMISSPSPWRVSPSGDDDDA-------------------------------------------------------AADSEALLG--RETGTVSSRGADLPGWVRRARARAPVLEAENADLLFRLR-----------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXSQRSATSEGIGAALAVSWSGGGLE------------GAPPPAAAGSDSAGTPDPEDAADA---VVRTNAFLEFVAPGKVEVRHEELDEERAVGEGQVLVEAVCSSISSGTELKVFRGDFDSDSELDTTIKGMAGESMSYPLKYGYSLVGRVSKCGGGVDPDKFLGKLVFAFSPHSARVVADADGVMLVPE 797
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A6H5LPZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPZ8_9PHAE) HSP 1 Score: 337 bits (863), Expect = 7.420e-104 Identity = 258/530 (48.68%), Postives = 279/530 (52.64%), Query Frame = 3 Query: 114 GLPDTTVRVIAADFTSVDPDALFPAPDDAGHRRANDEKIAPATAAAAFDGNNRPPHVLVGCCLADLLPPAELVRALERLASGCRVGGGGGAAARGCLVYLPITFVGKTSMIPPAPQEGLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESL--EGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697 GLP+TTVRVI ADFTSVDP ALFP D A N ++ A+ PHVLVGCCLADLL P +LVRALERLA G G GG CLVYLPITF GKT MIP APQ S ++ L + QTI E GGD MISSPSPWRVS G D YMW CLLYF+GLGLAP+ + L QS XXXXXXXX A D+E+L G G E S DF GWVRRAR RAPVL+A+N DLLF LR G XXXXXX W+ G XXX AF G P G +S K AA VR NAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEA GMAGESMSYPL+YGYSLVGRVA+CG GVDP+KFLGKLVF FSPHS+WVVADADGVMLVPE Sbjct: 4 GLPETTVRVIPADFTSVDPAALFPR-DTASKDTVNPDETTTASR----------PHVLVGCCLADLLAPTDLVRALERLAGGSNSGDGG------CLVYLPITFAGKTRMIPSAPQARFRESRFPWASSTPP--------RPLLSVIPQTIEEHGGDVMISSPSPWRVS-PSGDDDGYMWHCLLYFIGLGLAPHRLPL-------QSDRRSXXXXXXXXXXXXXXXXXXXDAAADSEALLGRGTGTESS----RGVDFSGWVRRARARAPVLEAENADLLFGLRGGXXXXXXX-----XXXXXXRXXXWI--GXXXXLGDRAARRRIQRSATSECIGAAFA--------------------------VSWSGGGLEGAPPPAAAGSDSAGIPGPKDAADAA---VRTNAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEA-----------------------------GMAGESMSYPLKYGYSLVGRVARCGGGVDPDKFLGKLVFAFSPHSTWVVADADGVMLVPE 431
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A7S2Y7W5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7W5_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.080e-33 Identity = 128/482 (26.56%), Postives = 181/482 (37.55%), Query Frame = 3 Query: 276 PHVLVGCCLADLLPPAELVRALER--LASGCRVGGGGGAAARGCLVYLPITFVGKTSMIPPAPQE-----GLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697 P +++GCC ADL+ P +LV++ + LA L Y PITF G T + P P ++PSD A A Y L+DR GH+ L+Q +R GG + S W + + Y+W ++ F G AP L+ G D GW++RARE P +QA N DLLFR+ ++H V+AA++ + E ++F AP KV ++ + +G+ +V + +CS ISSGTELKVF+G F+ + LD I M GE M+YPL YGYSLVG V +CGA V D E +GKLVF F+PH+S VV D + +VP+ Sbjct: 316 PDIILGCCFADLMEPNDLVQSTVQQFLAKPQH-------DQSYALAYFPITFCGTTQFLKPQPSTLSKAGVVIPSDAAAFAFYAKALQDRHGHNLDSSKLVQAMRSYGGQLLSRGNSNWNIVPSNNDEENYLWHAMMRFFGTTAAP--------------------------------------------ELQKAGF----------DAQGWLQRARENKPTIQASNQDLLFRI--------------------------------------------------PFVGREIQRH--------------------------------------------------VEAASSSLSETFEE---IQFTAPNKVSTVEKQTRSQ-TLGDTEVRIAGVCSLISSGTELKVFKGLFE-DVALDVNIPSMEGERMTYPLTYGYSLVGHVVECGAAVADKENLIGKLVFAFAPHASQVVVDQSALQVVPD 631
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A7S2Y827_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y827_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.710e-29 Identity = 114/434 (26.27%), Postives = 159/434 (36.64%), Query Frame = 3 Query: 414 PITFVGKTSMIPPAPQE-----GLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697 PITF G T + P P ++PSD A A Y L+DR GH+ L+Q +R GG + S W + + Y+W ++ F G AP L+ G D GW++RARE P +QA N DLLFR+ ++H V+AA++ + E ++F AP KV ++ + +G+ +V + +CS ISSGTELKVF+G F+ + LD I M GE M+YPL YGYSLVG V +CGA V D E +GKLVF F+PH+S VV D + +VP+ Sbjct: 6 PITFCGTTQFLKPQPSTLSKAGVVIPSDAAAFAFYAKALQDRHGHNLDSSKLVQAMRSYGGQLLSRGNSNWNIVPSNNDEENYLWHAMMRFFGTTAAP--------------------------------------------ELQKAGF----------DAQGWLQRARENKPTIQASNQDLLFRI--------------------------------------------------PFVGREIQRH--------------------------------------------------VEAASSSLSETFEE---IQFTAPNKVSTVEKQTRSQ-TLGDTEVRIAGVCSLISSGTELKVFKGLFE-DVALDVNIPSMEGERMTYPLTYGYSLVGHVVECGAAVADKENLIGKLVFAFAPHASQVVVDQSALQVVPD 280
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A7S1HEZ9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEZ9_HEMAN) HSP 1 Score: 127 bits (319), Expect = 2.120e-27 Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 3 Query: 1263 DESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMS 1706 D + AD AA +G + R LEF A KV V ++ AVGEG++L+++I S +SSGTELKVF GDFD S+LDTTI+ M +M+YPL+YGYSLVGRV G GVD +++G+LVF F+PH S V AD ++VP +S Sbjct: 200 DAAAKRADSSAARSGASESGRRQ-ILEFFAEKKVRVNVSDVP---AVGEGELLLKSIRSVVSSGTELKVFCGDFDQGSQLDTTIEDMKDATMAYPLQYGYSLVGRVEAVGDGVDAGEWMGRLVFAFAPHGSHTVVPADSAIVVPAGIS 343
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A6U3SUV6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SUV6_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.790e-27 Identity = 138/505 (27.33%), Postives = 200/505 (39.60%), Query Frame = 3 Query: 276 PHVLVGCCLADLLPPAELVRALERLASGCRVGGGGGAAAR---GCLVYLPITFVGKTSMIPPAP---------QEG-----LLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYF---VGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARER--APVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAA-DVKAAAAGGATVVREN-AFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESE--LDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMSA 1709 PH++VGCCLADL P +L R++ + A+ R L+Y PITF G TS PP P G ++PSD Y L + H+ ++ T+++ T+ S S W ++ Y+W ++YF GL L E + G D GW R ER P + A NVDLLFR A E + ++ + + A R DE+++ +++ + T + + +E+ + V+++E E +G QV V++ICS ISSGTELK+FRG FD++S+ LD IKGM +MSYPL YGYSLVGRV KCG+ V D + G+LVFTFSPHSS ++AD + + +VPE +SA Sbjct: 632 PHLIVGCCLADLFHPTDLTRSIFKFANFIGKNDNTNKQERKNDDVLLYFPITFAGTTSFYPPKPFGISSTKSNNNGKNSMMMVPSDTVAFHFYSHLLSTKYRHNLNPSIIVSTMKKFNWKTIASGASHWSINPI---KHAYLWNTMIYFFKSTGLLL---------------------------------------------ELMNYGW-----------DGIGWFERIFERDVLPDICASNVDLLFRY---AISSEKSSYSTSSSPEKQTKQDEIHENN------------------------AMRNKQ-----------------------------------------DEAITTVGEIQFVSPRNVTKITKLWKIMEYENNQDLNVKNKE--EVVYLGPNQVEVQSICSLISSGTELKIFRGTFDNDSDAALDINIKGMDDSTMSYPLTYGYSLVGRVVKCGSAVPDADSLHGRLVFTFSPHSSRIIADRESLHVVPEGISA 1007
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: L1IRP4_GUITC (ADH_zinc_N domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRP4_GUITC) HSP 1 Score: 125 bits (314), Expect = 2.840e-26 Identity = 64/132 (48.48%), Postives = 95/132 (71.97%), Query Frame = 3 Query: 1317 VVRENAFLEFVAPGKVEVRHEE--LDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMS 1706 V E A LEFV P +V+VR+E+ + + + ++L++ + S++SSGTELK+FRG+F+ +++LDTTI+ M + M+YPL YGYSLVGRV G+GV ++ GK +F+FSPHSS + A+G MLVPE +S Sbjct: 558 VSNERAILEFVGPRQVKVRYEQDVAELNSRLAKDELLLQTLSSAVSSGTELKIFRGEFEEDAQLDTTIEDMKEQRMAYPLSYGYSLVGRVI--GSGVSAREWEGKRLFSFSPHSSHAIVSANGAMLVPEHIS 687
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: B8BXG1_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXG1_THAPS) HSP 1 Score: 120 bits (301), Expect = 8.290e-26 Identity = 61/100 (61.00%), Postives = 73/100 (73.00%), Query Frame = 3 Query: 1413 QVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMSA 1709 Q+ +E++CS ISSGTELK+F+G F+S S LD IKGMA ESM YPL YGYSLVGRV CG V D + +GKLVFTFS HSS V+ D D LVP+ + A Sbjct: 90 QIEIESVCSLISSGTELKIFKGSFESAS-LDVNIKGMADESMEYPLAYGYSLVGRVVACGVDVEDADSLIGKLVFTFSAHSSRVIIDRDACQLVPDGIDA 188
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A1E7FW20_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW20_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.120e-25 Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 1344 FVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMSA 1709 F P KV + ++L + +G QVL+ A S ISSGTELK+F+G FD ++ LD IK M E MSYPL YGY LVG V CG+ V EK++GK VFTFSPH++ ++ D D +VP+ ++A Sbjct: 77 FTEPYKVTTKQKDLSSK--LGPRQVLIRASYSLISSGTELKIFKGKFDDDAALDINIKNMEDERMSYPLSYGYCLVGVVVDCGSEVLREKYMGKTVFTFSPHATHIITDVDATQIVPDGINA 196
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A4D9D1D3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1D3_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.220e-25 Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 1323 RENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDF---DSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGK---------LVFTFSPHSSWVVADADGVMLVP 1694 R + F+EF P V R E E+ A+G +V V+A+CS ISSGTELKV+RG+ + E+D IKGMAGE+++YPLRYGY+LVGRV +CGA V D E+ +G+ LVF FSPH+S V A +++VP Sbjct: 669 RRHVFVEFAGPRDVRCREEIWREKPALGSEEVEVDALCSLISSGTELKVYRGEIPQGEEAGEVDVNIKGMAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVP 805 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10263.277.1 >prot_H-canaliculatus_F_contig10263.277.1 ID=prot_H-canaliculatus_F_contig10263.277.1|Name=mRNA_H-canaliculatus_F_contig10263.277.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=430bp MIPPAPQEGLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMback to top mRNA from alignment at H-canaliculatus_F_contig10263:495..5030+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10263.277.1 ID=mRNA_H-canaliculatus_F_contig10263.277.1|Name=mRNA_H-canaliculatus_F_contig10263.277.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4536bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10263:495..5030+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10263:495..5030+ >mRNA_H-canaliculatus_F_contig10263.277.1 ID=mRNA_H-canaliculatus_F_contig10263.277.1|Name=mRNA_H-canaliculatus_F_contig10263.277.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2580bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10263:495..5030+ (Hapterophycus canaliculatus Oshoro5f female)back to top |