mRNA_H-canaliculatus_F_contig10263.277.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10263.277.1
Unique NamemRNA_H-canaliculatus_F_contig10263.277.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: D7FVW7_ECTSI (ADH_zinc_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW7_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 5.190e-132
Identity = 293/528 (55.49%), Postives = 315/528 (59.66%), Query Frame = 3
Query:  114 GLPDTTVRVIAADFTSVDPDALFPAPDDAGHRRANDEKIAPATAAAAFDGNNRPPHVLVGCCLADLLPPAELVRALERLASGCRVGGGGGAAARGCLVYLPITFVGKTSMIPPAPQEGLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697
            GLP+TTV VI ADFTSVD  ALFP  D A    AN ++I PA+           PHVLVGCCLADLL P +LV ALERLA G   G GG      CLVYLPITF GKT MIP APQEG +PSDEAVL AYD CLR+ QGH TCL+TLLQTI E GGD MISSPSPWRVS  G  D                                                         A D+E+L G   E   +    AD PGWVRRAR RAPVL+A+N DLLFRLR                             GXXXXXXXXXXXXXXXXXXXXXXXX   Q +                                G   P   G +S    D + AA     VVR NAFLEFVAPGKVEVRHEELDEE AVGEGQVLVEA+CSSISSGTELKVFRGDFDS+SELDTTIKGMAGESMSYPL+YGYSLVGRV+KCG GVDP+KFLGKLVF FSPHS+ VVADADGVMLVPE
Sbjct:  388 GLPETTVCVIPADFTSVDLAALFPR-DTASKDIANPDEITPASR----------PHVLVGCCLADLLAPTDLVGALERLAGGSSSGDGG------CLVYLPITFAGKTRMIPSAPQEGFVPSDEAVLEAYDTCLREEQGHFTCLDTLLQTIEEHGGDVMISSPSPWRVSPSGDDDDA-------------------------------------------------------AADSEALLG--RETGTVSSRGADLPGWVRRARARAPVLEAENADLLFRLR-----------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXSQRSATSEGIGAALAVSWSGGGLE------------GAPPPAAAGSDSAGTPDPEDAADA---VVRTNAFLEFVAPGKVEVRHEELDEERAVGEGQVLVEAVCSSISSGTELKVFRGDFDSDSELDTTIKGMAGESMSYPLKYGYSLVGRVSKCGGGVDPDKFLGKLVFAFSPHSARVVADADGVMLVPE 797          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A6H5LPZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPZ8_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 7.420e-104
Identity = 258/530 (48.68%), Postives = 279/530 (52.64%), Query Frame = 3
Query:  114 GLPDTTVRVIAADFTSVDPDALFPAPDDAGHRRANDEKIAPATAAAAFDGNNRPPHVLVGCCLADLLPPAELVRALERLASGCRVGGGGGAAARGCLVYLPITFVGKTSMIPPAPQEGLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESL--EGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697
            GLP+TTVRVI ADFTSVDP ALFP  D A     N ++   A+           PHVLVGCCLADLL P +LVRALERLA G   G GG      CLVYLPITF GKT MIP APQ     S     ++              L  + QTI E GGD MISSPSPWRVS   G D  YMW CLLYF+GLGLAP+ + L       QS               XXXXXXXX  A D+E+L   G G E S       DF GWVRRAR RAPVL+A+N DLLF LR G            XXXXXX    W+  G XXX                     AF                                    G   P   G +S      K AA      VR NAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEA                             GMAGESMSYPL+YGYSLVGRVA+CG GVDP+KFLGKLVF FSPHS+WVVADADGVMLVPE
Sbjct:    4 GLPETTVRVIPADFTSVDPAALFPR-DTASKDTVNPDETTTASR----------PHVLVGCCLADLLAPTDLVRALERLAGGSNSGDGG------CLVYLPITFAGKTRMIPSAPQARFRESRFPWASSTPP--------RPLLSVIPQTIEEHGGDVMISSPSPWRVS-PSGDDDGYMWHCLLYFIGLGLAPHRLPL-------QSDRRSXXXXXXXXXXXXXXXXXXXDAAADSEALLGRGTGTESS----RGVDFSGWVRRARARAPVLEAENADLLFGLRGGXXXXXXX-----XXXXXXRXXXWI--GXXXXLGDRAARRRIQRSATSECIGAAFA--------------------------VSWSGGGLEGAPPPAAAGSDSAGIPGPKDAADAA---VRTNAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEA-----------------------------GMAGESMSYPLKYGYSLVGRVARCGGGVDPDKFLGKLVFAFSPHSTWVVADADGVMLVPE 431          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A7S2Y7W5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7W5_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.080e-33
Identity = 128/482 (26.56%), Postives = 181/482 (37.55%), Query Frame = 3
Query:  276 PHVLVGCCLADLLPPAELVRALER--LASGCRVGGGGGAAARGCLVYLPITFVGKTSMIPPAPQE-----GLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697
            P +++GCC ADL+ P +LV++  +  LA                L Y PITF G T  + P P        ++PSD A  A Y   L+DR GH+     L+Q +R  GG  +    S W +      +  Y+W  ++ F G   AP                                             L+  G           D  GW++RARE  P +QA N DLLFR+                                                         ++H                                                  V+AA++  +    E   ++F AP KV    ++   +  +G+ +V +  +CS ISSGTELKVF+G F+ +  LD  I  M GE M+YPL YGYSLVG V +CGA V D E  +GKLVF F+PH+S VV D   + +VP+
Sbjct:  316 PDIILGCCFADLMEPNDLVQSTVQQFLAKPQH-------DQSYALAYFPITFCGTTQFLKPQPSTLSKAGVVIPSDAAAFAFYAKALQDRHGHNLDSSKLVQAMRSYGGQLLSRGNSNWNIVPSNNDEENYLWHAMMRFFGTTAAP--------------------------------------------ELQKAGF----------DAQGWLQRARENKPTIQASNQDLLFRI--------------------------------------------------PFVGREIQRH--------------------------------------------------VEAASSSLSETFEE---IQFTAPNKVSTVEKQTRSQ-TLGDTEVRIAGVCSLISSGTELKVFKGLFE-DVALDVNIPSMEGERMTYPLTYGYSLVGHVVECGAAVADKENLIGKLVFAFAPHASQVVVDQSALQVVPD 631          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A7S2Y827_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y827_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.710e-29
Identity = 114/434 (26.27%), Postives = 159/434 (36.64%), Query Frame = 3
Query:  414 PITFVGKTSMIPPAPQE-----GLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPE 1697
            PITF G T  + P P        ++PSD A  A Y   L+DR GH+     L+Q +R  GG  +    S W +      +  Y+W  ++ F G   AP                                             L+  G           D  GW++RARE  P +QA N DLLFR+                                                         ++H                                                  V+AA++  +    E   ++F AP KV    ++   +  +G+ +V +  +CS ISSGTELKVF+G F+ +  LD  I  M GE M+YPL YGYSLVG V +CGA V D E  +GKLVF F+PH+S VV D   + +VP+
Sbjct:    6 PITFCGTTQFLKPQPSTLSKAGVVIPSDAAAFAFYAKALQDRHGHNLDSSKLVQAMRSYGGQLLSRGNSNWNIVPSNNDEENYLWHAMMRFFGTTAAP--------------------------------------------ELQKAGF----------DAQGWLQRARENKPTIQASNQDLLFRI--------------------------------------------------PFVGREIQRH--------------------------------------------------VEAASSSLSETFEE---IQFTAPNKVSTVEKQTRSQ-TLGDTEVRIAGVCSLISSGTELKVFKGLFE-DVALDVNIPSMEGERMTYPLTYGYSLVGHVVECGAAVADKENLIGKLVFAFAPHASQVVVDQSALQVVPD 280          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A7S1HEZ9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEZ9_HEMAN)

HSP 1 Score: 127 bits (319), Expect = 2.120e-27
Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 3
Query: 1263 DESLSAADVKAAAAGGATVVRENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMS 1706
            D +   AD  AA +G +   R    LEF A  KV V   ++    AVGEG++L+++I S +SSGTELKVF GDFD  S+LDTTI+ M   +M+YPL+YGYSLVGRV   G GVD  +++G+LVF F+PH S  V  AD  ++VP  +S
Sbjct:  200 DAAAKRADSSAARSGASESGRRQ-ILEFFAEKKVRVNVSDVP---AVGEGELLLKSIRSVVSSGTELKVFCGDFDQGSQLDTTIEDMKDATMAYPLQYGYSLVGRVEAVGDGVDAGEWMGRLVFAFAPHGSHTVVPADSAIVVPAGIS 343          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A6U3SUV6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SUV6_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.790e-27
Identity = 138/505 (27.33%), Postives = 200/505 (39.60%), Query Frame = 3
Query:  276 PHVLVGCCLADLLPPAELVRALERLASGCRVGGGGGAAAR---GCLVYLPITFVGKTSMIPPAP---------QEG-----LLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTMISSPSPWRVSFDGGGDARYMWQCLLYF---VGLGLAPYPIHLTTPATATQSSLVDLPTQPSALTSSXXXXXXXXXXAVDAESLEGGGLERSPLPPTRADFPGWVRRARER--APVLQADNVDLLFRLRAGATRGEGARRGGXXXXXXXXRRSWVRDGGXXXXXXXXXXXXXXXXXXXXXXXXAFRQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGITPERVGDESLSAA-DVKAAAAGGATVVREN-AFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESE--LDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMSA 1709
            PH++VGCCLADL  P +L R++ + A+            R     L+Y PITF G TS  PP P           G     ++PSD      Y   L  +  H+     ++ T+++    T+ S  S W ++        Y+W  ++YF    GL L                                             E +  G            D  GW  R  ER   P + A NVDLLFR    A   E +            ++  + +                          A R                                            DE+++   +++  +    T + +    +E+     + V+++E  E   +G  QV V++ICS ISSGTELK+FRG FD++S+  LD  IKGM   +MSYPL YGYSLVGRV KCG+ V D +   G+LVFTFSPHSS ++AD + + +VPE +SA
Sbjct:  632 PHLIVGCCLADLFHPTDLTRSIFKFANFIGKNDNTNKQERKNDDVLLYFPITFAGTTSFYPPKPFGISSTKSNNNGKNSMMMVPSDTVAFHFYSHLLSTKYRHNLNPSIIVSTMKKFNWKTIASGASHWSINPI---KHAYLWNTMIYFFKSTGLLL---------------------------------------------ELMNYGW-----------DGIGWFERIFERDVLPDICASNVDLLFRY---AISSEKSSYSTSSSPEKQTKQDEIHENN------------------------AMRNKQ-----------------------------------------DEAITTVGEIQFVSPRNVTKITKLWKIMEYENNQDLNVKNKE--EVVYLGPNQVEVQSICSLISSGTELKIFRGTFDNDSDAALDINIKGMDDSTMSYPLTYGYSLVGRVVKCGSAVPDADSLHGRLVFTFSPHSSRIIADRESLHVVPEGISA 1007          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: L1IRP4_GUITC (ADH_zinc_N domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRP4_GUITC)

HSP 1 Score: 125 bits (314), Expect = 2.840e-26
Identity = 64/132 (48.48%), Postives = 95/132 (71.97%), Query Frame = 3
Query: 1317 VVRENAFLEFVAPGKVEVRHEE--LDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMS 1706
            V  E A LEFV P +V+VR+E+   +    + + ++L++ + S++SSGTELK+FRG+F+ +++LDTTI+ M  + M+YPL YGYSLVGRV   G+GV   ++ GK +F+FSPHSS  +  A+G MLVPE +S
Sbjct:  558 VSNERAILEFVGPRQVKVRYEQDVAELNSRLAKDELLLQTLSSAVSSGTELKIFRGEFEEDAQLDTTIEDMKEQRMAYPLSYGYSLVGRVI--GSGVSAREWEGKRLFSFSPHSSHAIVSANGAMLVPEHIS 687          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: B8BXG1_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXG1_THAPS)

HSP 1 Score: 120 bits (301), Expect = 8.290e-26
Identity = 61/100 (61.00%), Postives = 73/100 (73.00%), Query Frame = 3
Query: 1413 QVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMSA 1709
            Q+ +E++CS ISSGTELK+F+G F+S S LD  IKGMA ESM YPL YGYSLVGRV  CG  V D +  +GKLVFTFS HSS V+ D D   LVP+ + A
Sbjct:   90 QIEIESVCSLISSGTELKIFKGSFESAS-LDVNIKGMADESMEYPLAYGYSLVGRVVACGVDVEDADSLIGKLVFTFSAHSSRVIIDRDACQLVPDGIDA 188          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A1E7FW20_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW20_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.120e-25
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 3
Query: 1344 FVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTFSPHSSWVVADADGVMLVPEVMSA 1709
            F  P KV  + ++L  +  +G  QVL+ A  S ISSGTELK+F+G FD ++ LD  IK M  E MSYPL YGY LVG V  CG+ V  EK++GK VFTFSPH++ ++ D D   +VP+ ++A
Sbjct:   77 FTEPYKVTTKQKDLSSK--LGPRQVLIRASYSLISSGTELKIFKGKFDDDAALDINIKNMEDERMSYPLSYGYCLVGVVVDCGSEVLREKYMGKTVFTFSPHATHIITDVDATQIVPDGINA 196          
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Match: A0A4D9D1D3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1D3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.220e-25
Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 3
Query: 1323 RENAFLEFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDF---DSESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGV-DPEKFLGK---------LVFTFSPHSSWVVADADGVMLVP 1694
            R + F+EF  P  V  R E   E+ A+G  +V V+A+CS ISSGTELKV+RG+    +   E+D  IKGMAGE+++YPLRYGY+LVGRV +CGA V D E+ +G+         LVF FSPH+S  V  A  +++VP
Sbjct:  669 RRHVFVEFAGPRDVRCREEIWREKPALGSEEVEVDALCSLISSGTELKVYRGEIPQGEEAGEVDVNIKGMAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVP 805          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10263.277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVW7_ECTSI5.190e-13255.49ADH_zinc_N domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5LPZ8_9PHAE7.420e-10448.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2Y7W5_9STRA1.080e-3326.56Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2Y827_9STRA1.710e-2926.27Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1HEZ9_HEMAN2.120e-2749.32Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A6U3SUV6_9STRA2.790e-2727.33Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
L1IRP4_GUITC2.840e-2648.48ADH_zinc_N domain-containing protein n=2 Tax=Guill... [more]
B8BXG1_THAPS8.290e-2661.00Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A1E7FW20_9STRA3.120e-2549.18Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A4D9D1D3_9STRA3.220e-2548.91Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10263contigH-canaliculatus_F_contig10263:495..5030 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.2
Seed ortholog evalue1.9e-85
Seed eggNOG ortholog2880.D7FVW7
EggNOG free text desc.L-threonine 3-dehydrogenase activity
EggNOG OGs2REAB@2759,COG1063@1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1844
Cds size1290
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10263.277.1prot_H-canaliculatus_F_contig10263.277.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10263 1280..4916 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928659.6237085-UTR-H-canaliculatus_F_contig10263:494..6081622928659.6237085-UTR-H-canaliculatus_F_contig10263:494..608Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10263 495..608 +
1696845516.4249773-UTR-H-canaliculatus_F_contig10263:494..6081696845516.4249773-UTR-H-canaliculatus_F_contig10263:494..608Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10263 495..608 +
1622928659.6622512-UTR-H-canaliculatus_F_contig10263:953..12791622928659.6622512-UTR-H-canaliculatus_F_contig10263:953..1279Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10263 954..1279 +
1696845516.4374704-UTR-H-canaliculatus_F_contig10263:953..12791696845516.4374704-UTR-H-canaliculatus_F_contig10263:953..1279Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10263 954..1279 +
1622928659.7710369-UTR-H-canaliculatus_F_contig10263:4916..50301622928659.7710369-UTR-H-canaliculatus_F_contig10263:4916..5030Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10263 4917..5030 +
1696845516.4902527-UTR-H-canaliculatus_F_contig10263:4916..50301696845516.4902527-UTR-H-canaliculatus_F_contig10263:4916..5030Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10263 4917..5030 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928659.7023144-CDS-H-canaliculatus_F_contig10263:1279..13001622928659.7023144-CDS-H-canaliculatus_F_contig10263:1279..1300Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 1280..1300 +
1696845516.4463131-CDS-H-canaliculatus_F_contig10263:1279..13001696845516.4463131-CDS-H-canaliculatus_F_contig10263:1279..1300Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 1280..1300 +
1622928659.7172124-CDS-H-canaliculatus_F_contig10263:1742..18411622928659.7172124-CDS-H-canaliculatus_F_contig10263:1742..1841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 1743..1841 +
1696845516.4555526-CDS-H-canaliculatus_F_contig10263:1742..18411696845516.4555526-CDS-H-canaliculatus_F_contig10263:1742..1841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 1743..1841 +
1622928659.7295341-CDS-H-canaliculatus_F_contig10263:2632..35381622928659.7295341-CDS-H-canaliculatus_F_contig10263:2632..3538Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 2633..3538 +
1696845516.4639428-CDS-H-canaliculatus_F_contig10263:2632..35381696845516.4639428-CDS-H-canaliculatus_F_contig10263:2632..3538Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 2633..3538 +
1622928659.743607-CDS-H-canaliculatus_F_contig10263:3816..38671622928659.743607-CDS-H-canaliculatus_F_contig10263:3816..3867Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 3817..3867 +
1696845516.4729197-CDS-H-canaliculatus_F_contig10263:3816..38671696845516.4729197-CDS-H-canaliculatus_F_contig10263:3816..3867Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 3817..3867 +
1622928659.7587237-CDS-H-canaliculatus_F_contig10263:4703..49161622928659.7587237-CDS-H-canaliculatus_F_contig10263:4703..4916Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 4704..4916 +
1696845516.4817326-CDS-H-canaliculatus_F_contig10263:4703..49161696845516.4817326-CDS-H-canaliculatus_F_contig10263:4703..4916Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10263 4704..4916 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10263.277.1

>prot_H-canaliculatus_F_contig10263.277.1 ID=prot_H-canaliculatus_F_contig10263.277.1|Name=mRNA_H-canaliculatus_F_contig10263.277.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=430bp
MIPPAPQEGLLPSDEAVLAAYDACLRDRQGHHTCLETLLQTIREQGGDTM
ISSPSPWRVSFDGGGDARYMWQCLLYFVGLGLAPYPIHLTTPATATQSSL
VDLPTQPSALTSSSSSSSSAVAAAVDAESLEGGGLERSPLPPTRADFPGW
VRRARERAPVLQADNVDLLFRLRAGATRGEGARRGGGEGGGKGGRRSWVR
DGGDGGGVLGAAAGGGGGSGVHGGARGAFRQHAGGGSARRQGQGSAAVFG
GGATAIAVSSRGGGAGGITPERVGDESLSAADVKAAAAGGATVVRENAFL
EFVAPGKVEVRHEELDEEGAVGEGQVLVEAICSSISSGTELKVFRGDFDS
ESELDTTIKGMAGESMSYPLRYGYSLVGRVAKCGAGVDPEKFLGKLVFTF
SPHSSWVVADADGVMLVPEVMSAAGGAAE*
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mRNA from alignment at H-canaliculatus_F_contig10263:495..5030+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10263.277.1 ID=mRNA_H-canaliculatus_F_contig10263.277.1|Name=mRNA_H-canaliculatus_F_contig10263.277.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4536bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10263:495..5030+ (Hapterophycus canaliculatus Oshoro5f female)
AGGGCCTGGTGAGGGAAGGGTACACCCTCGACGACGATGATTCCGGAGTG AGTTGTTCCGGCAGCGGCGGGCCGCCGCTGTGGAGATTGGCCATCCGCCG GGACGAGGAGTCAGGTACGCTTAAACCTCTATGTTTGATTCCCTTGTCCC CTTGTTCTCGACGTGCTGTTGTCCCGAAAAGGCACGAATCACCCCGCCTG TCTCTTAGGTTATTTTTTCCTGTGCGTGCTCTCGTCTCTCTAAGCGTCTA GTTCGCTCTCTCCCTCTAGAAATATTTTTCCTTTTCCTTGTTCTCGCGTC TGCCCCCCCCCCGTATTGTGCCTAGGATTTTAGGGGCAGGGTCGCAAGGA TGGTACGAAGACCAAGTTTGTGTAAAAGAGTCGATATGAGCACACAGGTA CCCCCTCACATCAACCCCCGGCCCCTTGTCCGCGCGCCCTGTTTCACCCG GCCGGCCAGGCCTCCCCGACACCACGGTCCGCGTCATCGCGGCCGACTTC ACCTCCGTCGACCCCGACGCCCTCTTCCCCGCTCCCGATGACGCTGGTCA TCGACGCGCCAACGATGAGAAGATCGCCCCCGCTACCGCCGCCGCCGCCT TCGACGGGAACAATCGCCCGCCGCACGTTCTGGTGGGCTGCTGCCTGGCC GACCTGCTGCCCCCCGCCGAACTCGTGCGAGCCTTGGAGAGGCTTGCGAG TGGTTGCAGGGTTGGCGGCGGCGGCGGTGCTGCCGCGCGTGGGTGCCTGG TTTATTTGCCGATAACGTTCGTCGGGAAGACGAGCATGATCCCGCCGGCG CCGCAGGCAAGTGTTGGCATGCTCGTTGTTGTTGTTGCTGCTGCTGCTGT GATTTTGCGTTTTAGGCCGAGAGCAGATTAGTCGTCGTCAAGGCGCCTGC CACCGTTATGGTATGAGAGCGCGTGGTGACTGCTTACATGTTCGGCCTCC TCGCCCCAGCCTTCCGATTCACGCGGAGGGGTGTTGCAGTGGTGTTGGAA GGCGGTTGTCTCTGATGTTGCCCCCTGCCGCTTTGCATCGATTTTCATTT TCTCCTGAGAAGCATTTTCCTGTGTTCCATGCTGCCAATCACCTCCACGA CGAAAAAAAGCCATGTGCTCGCACATATCAAGCGCGTGCATTACACCGTT GCCCACCATGCCCTGGCGAGCAAGCTTCAAGCTCGACCCTCGAATGATGC GGACATGTCCAAAAAACGCGTCAATTTCCTCCCCTCCGCTCTTCACAGGA GGGGCTGCTCCCGAGCGACGAGGCGGTCCTCGCGGCGTACGACGCCTGCC TCAGGGATCGACAGGGCCACCACACGTGCCTCGAAACCCTCTTGCAGGTA CGGTGCAACGCCTGAGTGAGCTTGTTGTGGTTGTCGACGAGGTCGTGGTT GTGACCATCCGCCTCCTCCTTTCGCGTCGCACGAACTCCTTCAACCGTGC TTGTACGAGGTACGTGCCGTTTCGGTTCTTCCGTCTTTTCTTGCCGCCGC CTTGGCGGGTTTGGCGTCGTAGTGGCGTGCGCGAAGCCTCGCCGTTCGTG GCAGTGGTGCTGGCGCTGGCGCTGGCGCTGGCGCTGGTGTGCCTGAGAAA CGCAACTGTCCCCTGTAAGACCCAACCACGGCAGGCCGTCGACACAAAGA TGGCTTGTGCACCTCGTCCAATTCGTGATGTTAGCTTTGATCTTACCGGT TGAGCAGGACGTAACCATGGCGGCAGGAGCGCACGCACGTGCATCGAGCG TCCCGGCTGTCTTGCCACCACTCAGCGACCCCCCACCGTCCCACCGACGT CTAGCATCTATCTTCCAAGCTAATCGACTTGTGACAATGGTGGCCTCAAG GCCCTCCTTCGACGAAATAAGAACCGCCATGCGAACTACGAAACACAGAA CACTGGATTTCCTCTGTGTCTACGCAGCCCGAGGTGGGCCCGCGTCCTCG ATCTGCGACCTGCCGTGGAACACTACCCCAGCTTGAGACACCAGCCAATT CCTTGATAGAAGTGCTTCCATCAGGATTCAGCAACCGTGAGACACCGCCT CAGCACCGAAGGACCCCTCCCCCCCATCCACTCTTGTGCCCCCCCCCCCC CGACCCCTCCCTGATCTCCCCGGGCCTGCGCCACGAAGACCATCCGAGAG CAGGGAGGGGACACGATGATATCGTCCCCTTCCCCGTGGCGCGTTTCCTT CGACGGCGGCGGCGACGCCCGCTACATGTGGCAGTGCCTCCTCTACTTCG TCGGTCTCGGCCTCGCCCCGTACCCGATACACCTCACGACTCCGGCAACG GCGACACAGTCTAGCCTTGTAGACCTCCCGACGCAGCCGTCAGCACTTAC CAGCAGCAGCAGCAGCAGCAGCAGCGCCGTCGCCGCCGCTGTCGACGCGG AATCGTTGGAAGGCGGGGGGCTGGAGCGATCGCCGCTGCCTCCGACGCGG GCGGACTTCCCGGGGTGGGTGCGTCGCGCGAGGGAGCGGGCGCCGGTGCT CCAGGCGGACAACGTGGACCTGCTCTTCAGACTCCGCGCAGGGGCGACGC GGGGGGAGGGGGCACGCCGGGGAGGAGGGGAAGGAGGAGGAAAAGGAGGA AGGAGAAGTTGGGTGAGGGACGGCGGCGATGGTGGTGGTGTGCTCGGTGC TGCTGCTGGAGGAGGTGGAGGTAGTGGCGTCCACGGCGGCGCGAGAGGCG CTTTCCGGCAGCACGCCGGCGGGGGTTCCGCAAGGCGTCAGGGCCAGGGG AGCGCAGCGGTGTTCGGCGGCGGCGCTACGGCGATCGCCGTGTCCTCTCG AGGAGGGGGGGCGGGGGGAATTACCCCGGAGAGGGTGGGTGATGAAAGTT TGTCAGCCGCCGACGTGAAAGCCGCCGCTGCTGGGGGTGCTACCGTCGTT CGCGAGAACGCCTTTCTGGAGTTCGTGGCGCCTGGAAAGGTCGAGGTTCG GCACGAGGAGTTGGACGAGGAGGGGGCAGTAGGGGAGGGGCAGGTGCTGG TGGAGGCGATTTGTTCGTCCATCAGTTCCGGGACGGAGCTGAAGGTGAGA CTTGTAGGGAGGAGTAGAACGGGTAGAGATGGAGAGGGGAGCAAGGATCG GAGTGGGGTGGAAGAGGGGCGAGATATTTGGTGTCCGCGGCGCGGGCTGA TCGTGCCTTGGCACCCTGCTTCATCGGCAGAGCTTTTAATTCGGATCGAG GTCTTCCTTTTTTGTACGTGGAACTGTTCCGCTTGTCTTCGAGCGGACTG CTTCCATGATGGCACATCCGCGTAAATATTTTTGTGTTTGCAACTTCCCC CCCTCTCCATTCGCTTCGAAAGGTTTTCCGTGGAGACTTTGACTCGGAAT CGGAGCTAGACACGACAATCAAGGTGAGGAAAAGCGCCTAATGGTTAGCC TTCTGGTTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGATGCTGATGCTCTTTTCGTCGTGGTGACCTAATCTATATGCAATAC ACTAGGTGGTTCTTTTCACGTGGTGCCAGAGCAATCAAGTCGCAGTTGGC GTGTGGAGCAACTGGGAACCGAGCGCTGCTCGACGAGATGACGTATTGCA TCCCAATGTATTCCATGGTATTCCGTTGCTGTACTTGTAGTGTACCCAGT TGCACGAAATGACGCCTCAACCGTCGCAGCCGGCTTTCGCGTCAAAAAAG AACAAGGAAGAAGGAAGCCTCCAGCTACGCCTCGCACGACGTTCCGTGAT CATGCGGGTTATCGCACCCCCCCTGGACCGACCTCCAAAGCTCGATTACT CCGTCACGAAGAGGGTACCGATGCCAAACGACACATCATCTGATAGCCAT CGACGAGATCTTTCCAACGCCACCCTTTGCGGCGTTGACAATCTTCTTGT CGTGGAGTGATCGAGCTTTGGAAGTCGGTCCAGGGGGGGTCCGATAACCC GCATGATTACGGTACCTCAGGTGGTGTTCCTACGACGTTGTTATGTTTTG CTTTATAAAGTGCAGGACCTCCAGCACGGCGGAATCGGAGGACACCATCG GCATCATGGAACGATATGCCGCCAACCCCAGATTACACCCTAAAAGCTAA GCTACCCTCCTACGAGAAGCAAGCAACGGGCTATGCGAAATGCATGCAGC TCTGACCCAGCCCGCCCATCGTCTTTTCCTGCGCCCATGCTTCCTCACCC TGCGCAAAGGGCATGGCCGGCGAGAGCATGTCGTACCCCCTGCGGTACGG CTACAGCCTGGTGGGGCGGGTGGCGAAGTGCGGCGCCGGGGTGGACCCGG AGAAATTTCTCGGAAAGCTCGTGTTCACCTTCAGCCCGCACTCTTCCTGG GTGGTCGCCGACGCGGACGGAGTCATGCTCGTGCCGGAGGTGATGAGCGC GGCGGGCGGGGCGGCCGAGTAATTGCACCGCTCATCGGTCGTTTTTTGAA AAAAAGGTTTAACAACACTAAAGGAATACCGTCTGAGGCATACACTGTCC CAGAGGGCTTTTGTCAATTCCTTTTAGTGAGGGTTC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10263:495..5030+

>mRNA_H-canaliculatus_F_contig10263.277.1 ID=mRNA_H-canaliculatus_F_contig10263.277.1|Name=mRNA_H-canaliculatus_F_contig10263.277.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2580bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10263:495..5030+ (Hapterophycus canaliculatus Oshoro5f female)
ATGATCCCGCCGGCGCCGCAGATGATCCCGCCGGCGCCGCAGGAGGGGCT
GCTCCCGAGCGACGAGGCGGTCCTCGCGGCGTACGACGCCTGCCTCAGGG
ATCGACAGGGCCACCACACGTGCCTCGAAACCCTCTTGCAGGAGGGGCTG
CTCCCGAGCGACGAGGCGGTCCTCGCGGCGTACGACGCCTGCCTCAGGGA
TCGACAGGGCCACCACACGTGCCTCGAAACCCTCTTGCAGACCATCCGAG
AGCAGGGAGGGGACACGATGATATCGTCCCCTTCCCCGTGGCGCGTTTCC
TTCGACGGCGGCGGCGACGCCCGCTACATGTGGCAGTGCCTCCTCTACTT
CGTCGGTCTCGGCCTCGCCCCGTACCCGATACACCTCACGACTCCGGCAA
CGGCGACACAGTCTAGCCTTGTAGACCTCCCGACGCAGCCGTCAGCACTT
ACCAGCAGCAGCAGCAGCAGCAGCAGCGCCGTCGCCGCCGCTGTCGACGC
GGAATCGTTGGAAGGCGGGGGGCTGGAGCGATCGCCGCTGCCTCCGACGC
GGGCGGACTTCCCGGGGTGGGTGCGTCGCGCGAGGGAGCGGGCGCCGGTG
CTCCAGGCGGACAACGTGGACCTGCTCTTCAGACTCCGCGCAGGGGCGAC
GCGGGGGGAGGGGGCACGCCGGGGAGGAGGGGAAGGAGGAGGAAAAGGAG
GAAGGAGAAGTTGGGTGAGGGACGGCGGCGATGGTGGTGGTGTGCTCGGT
GCTGCTGCTGGAGGAGGTGGAGGTAGTGGCGTCCACGGCGGCGCGAGAGG
CGCTTTCCGGCAGCACGCCGGCGGGGGTTCCGCAAGGCGTCAGGGCCAGG
GGAGCGCAGCGGTGTTCGGCGGCGGCGCTACGGCGATCGCCGTGTCCTCT
CGAGGAGGGGGGGCGGGGGGAATTACCCCGGAGAGGGTGGGTGATGAAAG
TTTGTCAGCCGCCGACGTGAAAGCCGCCGCTGCTGGGGGTGCTACCGTCG
TTCGCGAGAACGCCTTTCTGGAGTTCGTGGCGCCTGGAAAGGTCGAGGTT
CGGCACGAGGAGTTGGACGAGGAGGGGGCAGTAGGGGAGGGGCAGGTGCT
GGTGGAGGCGATTTGTTCGTCCATCAGTTCCGGGACGGAGCTGAAGACCA
TCCGAGAGCAGGGAGGGGACACGATGATATCGTCCCCTTCCCCGTGGCGC
GTTTCCTTCGACGGCGGCGGCGACGCCCGCTACATGTGGCAGTGCCTCCT
CTACTTCGTCGGTCTCGGCCTCGCCCCGTACCCGATACACCTCACGACTC
CGGCAACGGCGACACAGTCTAGCCTTGTAGACCTCCCGACGCAGCCGTCA
GCACTTACCAGCAGCAGCAGCAGCAGCAGCAGCGCCGTCGCCGCCGCTGT
CGACGCGGAATCGTTGGAAGGCGGGGGGCTGGAGCGATCGCCGCTGCCTC
CGACGCGGGCGGACTTCCCGGGGTGGGTGCGTCGCGCGAGGGAGCGGGCG
CCGGTGCTCCAGGCGGACAACGTGGACCTGCTCTTCAGACTCCGCGCAGG
GGCGACGCGGGGGGAGGGGGCACGCCGGGGAGGAGGGGAAGGAGGAGGAA
AAGGAGGAAGGAGAAGTTGGGTGAGGGACGGCGGCGATGGTGGTGGTGTG
CTCGGTGCTGCTGCTGGAGGAGGTGGAGGTAGTGGCGTCCACGGCGGCGC
GAGAGGCGCTTTCCGGCAGCACGCCGGCGGGGGTTCCGCAAGGCGTCAGG
GCCAGGGGAGCGCAGCGGTGTTCGGCGGCGGCGCTACGGCGATCGCCGTG
TCCTCTCGAGGAGGGGGGGCGGGGGGAATTACCCCGGAGAGGGTGGGTGA
TGAAAGTTTGTCAGCCGCCGACGTGAAAGCCGCCGCTGCTGGGGGTGCTA
CCGTCGTTCGCGAGAACGCCTTTCTGGAGTTCGTGGCGCCTGGAAAGGTC
GAGGTTCGGCACGAGGAGTTGGACGAGGAGGGGGCAGTAGGGGAGGGGCA
GGTGCTGGTGGAGGCGATTTGTTCGTCCATCAGTTCCGGGACGGAGCTGA
AGGTTTTCCGTGGAGACTTTGACTCGGAATCGGAGCTAGACACGACAATC
AAGGTTTTCCGTGGAGACTTTGACTCGGAATCGGAGCTAGACACGACAAT
CAAGGGCATGGCCGGCGAGAGCATGTCGTACCCCCTGCGGTACGGCTACA
GCCTGGTGGGGCGGGTGGCGAAGTGCGGCGCCGGGGTGGACCCGGAGAAA
TTTCTCGGAAAGCTCGTGTTCACCTTCAGCCCGCACTCTTCCTGGGTGGT
CGCCGACGCGGACGGAGTCATGCTCGTGCCGGAGGTGATGAGCGCGGCGG
GCGGGGCGGCCGAGTAAGGCATGGCCGGCGAGAGCATGTCGTACCCCCTG
CGGTACGGCTACAGCCTGGTGGGGCGGGTGGCGAAGTGCGGCGCCGGGGT
GGACCCGGAGAAATTTCTCGGAAAGCTCGTGTTCACCTTCAGCCCGCACT
CTTCCTGGGTGGTCGCCGACGCGGACGGAGTCATGCTCGTGCCGGAGGTG
ATGAGCGCGGCGGGCGGGGCGGCCGAGTAA
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