mRNA_H-canaliculatus_F_contig10261.275.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: D7FWV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV9_ECTSI) HSP 1 Score: 486 bits (1252), Expect = 2.860e-161 Identity = 273/416 (65.62%), Postives = 311/416 (74.76%), Query Frame = 1 Query: 1 MSAAVWDAEKGRAAGEEAAATLAXXXXXXXXXXAVGTWDPQSQSGVGFDSAAGGSSSYPETKDNGMEGTAAADLFGNDLPPQSEQARTQQGDPAMVIASIAPNT-----NGGSXXXXXXXXXXTAFPSGSTMVAKRRNSMAFEIARMEREGKTAAPANPQKAQRVWELSRPRYIEESSDHGSAAGGG------RGGARRVRVPPGQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHFSSEQYSGQQAGVRPDLRGSAVCTSFLDVVAH-NDAWSTSTSDLPRNDCPLDAKQGFADMAGVLLLFLLLLLLGKAQERAADYTETQVHSAQAYTVKVSSPDPLADDPDRWRRLFAQFGHVSYVTVARGNGSLLRAMADRRAAGRRLEGSTANISEVI 1212 MSAAVWDAEKG A AAA A + W+P SQ+G+G + G S YPETKDNG + AAA+LFGND+P E T PA+VIASI P G TAF SG++ + KRRNSMAFEIAR+ER GK A ANP+KA+R WELSRPR++EESS HG A GG R G R R+PPGQENR AV YGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVA+VHFSSE YSGQQAGVR DLRGSAVCT+ +V+A D+W + RNDCPLD+KQG+ADMAGVLLLF+LLLLLGKAQE+AA+YT TQ+HSAQ YTVKVSSPDPLADDP+RWRRLFAQFGHVSYVTVARGNG+LLRAMA+RRA GRRLE ST +++E++ Sbjct: 1 MSAAVWDAEKGGATAAVAAAAAAEG--------SAENWEPASQAGIGGGVDSAGGSGYPETKDNGED--AAANLFGNDIP--DEDGGTGGDGPAIVIASIPPAAADGVVGRGGGLGTRGSAAGTAFASGTSTLTKRRNSMAFEIARVERAGK-AVLANPEKAKRAWELSRPRFVEESSVHGPAMGGSGXXXXXREGKTRARLPPGQENRNAVPYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAMVHFSSENYSGQQAGVRADLRGSAVCTASKEVLAFPRDSWDFRDT-FDRNDCPLDSKQGYADMAGVLLLFMLLLLLGKAQEKAAEYTATQIHSAQPYTVKVSSPDPLADDPERWRRLFAQFGHVSYVTVARGNGALLRAMANRRAVGRRLESSTPDVAEIV 402
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: A0A6H5JJI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI5_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 6.060e-149 Identity = 275/425 (64.71%), Postives = 310/425 (72.94%), Query Frame = 1 Query: 1 MSAAVWDAEKGRAAGEEAAATLAXXXXXXXXXXAVGTWDPQSQSGVGFDSAAGGSSSYPETKDNGMEGTAAADLFGNDLPPQSEQARTQQGDPAMVIASIAPNT-----NGGSXXXXXXXXXXTAFPSGSTMVAKRRNSMAFEIARMEREGKTAAPANPQKAQRVWELSRPRYIEESSDHGSAAGG------GRGGARRVRVPPGQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHFSSEQYSGQQAGVRPDLRGSAVCTSFLDVVAH-NDAWSTSTSDLPRNDCPLDAKQGFADMAGVLLLFLLLLLLGKAQERAADYTETQ-----------VHSAQAYTVKVSSPDPLADDPDRWRRLFAQFGHVSYVTVARGNGSLLRAMADRRAAGRRLEGSTANISE 1206 MSAA+WDAE G A XXXXXXX + W+P SQ+ +G + G S YPETKDNG + AAA+LFGND+P E T A+VIASI P G T F SG++ + KRRNSMAFEIAR+ER GK AA AN +KA+R WELSRPR++EE S HG A GG GR G RR R+PPGQENR AV YGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVA+VHFSSE YSGQQAGVR DLRGSAVCT+ V+A+ D+W + RNDCPLD+KQG+ADMAGVLLLF+LLLLLGKAQE+AA+YT TQ +HSAQ YTVKVSSPDPLADDPDRWRRLFAQFGHVSYVTVARGNG+LLRAMADRRAAGRRLE ST +++E Sbjct: 1 MSAALWDAENG-------GAPATAXXXXXXXESSAENWEPASQARIGGGIDSAGGSGYPETKDNGED--AAANLFGNDIPV--EDGGTGGXXXAVVIASIPPAAADGVVGRGGGLGTRGSAAGTGFASGTSTLTKRRNSMAFEIARVERAGK-AALANLEKAKRAWELSRPRFVEERSVHGPAMGGSGGAXXGRAGKRRARLPPGQENRDAVPYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAMVHFSSENYSGQQAGVRADLRGSAVCTASKQVLAYPRDSWDFRDT-FDRNDCPLDSKQGYADMAGVLLLFMLLLLLGKAQEKAAEYTATQGAGQVSVALTVIHSAQPYTVKVSSPDPLADDPDRWRRLFAQFGHVSYVTVARGNGALLRAMADRRAAGRRLETSTPDVAE 412
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: A0A6U1NVP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NVP9_9STRA) HSP 1 Score: 110 bits (275), Expect = 5.940e-23 Identity = 72/200 (36.00%), Postives = 100/200 (50.00%), Query Frame = 1 Query: 565 VRVPPGQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHFSSEQYSGQQAGVRPDLRGSAVCTSFLDVVAHNDA----WSTSTSDLPRNDCPLDAKQGFADMAGVLLLFLLLLLLGKAQERAADYTETQVHSAQAYTVKVSSPDPLADDPDRWRRLFAQFGHVSYVTVARGNGSLLRAMA 1152 V+V PG + Y +W T++ +GDFGL VG+YF TL L + A L + +F+ +YS Q GV L GSA CT V + W N+C QG + ++ + + L +L Q + A + +AQ Y V V+ P+P A DPD WR F Q+G VSYVTVA NG LL+A+A Sbjct: 51 VKVEPGDPS--GETYPLWKTTFQDLGDFGLGVGLYFSTLLMLTAMFVFLAILNSYSHAYFAGTEYSDGQEGVGTLLTGSAQCTLNETVTLVEETGDGNWEV-VGKAVHNECFPIKAQGDLTLTTIVFISIFLGVLTYFQNKTATAIDENEQTAQDYAVVVNDPNPDAMDPDEWRDFFQQWGTVSYVTVALNNGPLLQALA 247
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: A0A835YVZ1_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.110e-12 Identity = 58/204 (28.43%), Postives = 87/204 (42.65%), Query Frame = 1 Query: 571 VPPGQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHFSSEQYSGQQAGVRPDLRGSAVCTSFLDVVAHNDAWSTSTSDLPRNDCPLDAKQGFADMAGVLLLFLLLLLLGKAQERAADYTETQVHSAQAYTVKVSSPDPLADDPDRWRRLFAQFGHVSYVTVARGNGSLLRAMADRRAAGRRLE 1182 + PG+E G Y +W TS+ + DFGL +G+YF +A VCT+ V N +T+T G D + LFL +++ ++ A + +AQ Y+++V PD A +PD WR F QFGHV+YVTVA NG+LL ++ +R +LE Sbjct: 147 LEPGEE--GGELYSLWKTSFYEFDDFGLGIGLYFHMVAP---------------------------------------VCTA---AVCLNVKQNTATD------------VGLLDYFTIPFLFLFGVVMHMYHKKEAKSIDLGAQTAQDYSIRVEDPDKDATNPDEWREFFQQFGHVTYVTVALDNGTLLESLVKKRTIMHKLE 294
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: A0A7S1YRK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YRK1_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.540e-11 Identity = 60/222 (27.03%), Postives = 99/222 (44.59%), Query Frame = 1 Query: 580 GQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHFSSEQYSGQQAGV-RPDLRGSAVCTS-----------------------FLDVVAHNDAWSTSTSDLPR---NDCPL-DAKQGFADMAGVLLLFLLLLLLGKAQERAADYTETQVHSAQAYTVKVSSPDPLADDPDRWRRLF-------AQFGHVSYVTVARGNGSLL 1140 G++ R Y VWST +Q+ DFG+ VG+YF+TL L+ + + I++F YS +Q G+ L+GSAVCT F + A D ++ S S L N+C + D G A ++ + + + LL + + + Q +A Y+++V +P A+DP+ W+ Q HV+ T+A N L+ Sbjct: 31 GEDARPTKLYPVWSTPGSQLADFGVGVGIYFLTLKISAVICLIAGLINIPTILYFEGSNYSNRQEGISNGGLKGSAVCTDVEWKACPSCVRSDWDYFPSDTSRFASIPA--DIFTPSDSSLAFILVNNCNIADRYAGIASFCSLIFVTVSIFLLSRYLRKKEVDFDLQEQTATDYSIEVINPPVDANDPEVWKEYMEGILPDEVQNKHVTCCTIALDNTKLI 250
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: A0A7S3Q6C6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q6C6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.780e-9 Identity = 61/206 (29.61%), Postives = 92/206 (44.66%), Query Frame = 1 Query: 565 VRVPPGQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHFSSEQYSGQQAGVRPD--------LRGSAVCTSFLDV---VAHNDAWSTSTSDLP------------RNDCPLD-AKQGFADMAGVLLLFLLLLLLGKAQERAADYTETQVHSAQAYTVKVSSPDPLADDPDRWRRLFAQFGHVSYV 1110 V PG+++ Y ++T +QMGDFGL VG+YFVTL + + + L V I +F S+ YSG Q V D L+GSAVCT + V N +S + L +N C D +K ++ +LL+ + L+ + + +AQ Y++ V +P A DP W R F S+V Sbjct: 124 VNAVPGEDSLPTRLYSPFTTPLSQMGDFGLGVGLYFVTLRCICLVLFLAGLLNVYNIAYFRSDVYSGGQNSVNFDGSQSVPLILKGSAVCTQYEWVHCPSCTNSQFSDAKYRLVNADDNNNPVFALKNVCDGDISKVKMVNLGTILLVTVGLMYTYWQMSKKEVKMDIDEQTAQDYSIVVRNPPEDAVDPHEWVRFFQDVVGASFV 329
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: A0A1Z5JCD7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCD7_FISSO) HSP 1 Score: 70.1 bits (170), Expect = 3.440e-9 Identity = 63/216 (29.17%), Postives = 102/216 (47.22%), Query Frame = 1 Query: 547 RGGARRVRVPPGQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHFSSEQYSGQQAGVRPDLRGSAVCTSFLDVVAHNDAWSTSTSDLPRNDCPLDAKQ-GFADMAGVLLLFLLLLLLGKAQERAADYTETQVHSAQAYTVKVSSPDPLADDPDRWRRLFAQF---GHVSYVTVARGNGSLLRAMADRRAAGRRLE 1182 +GG + R PG+++ Y T AQ+GDFGL +GMYF TL L L+ L + I +F S+ Y+ PD G+ S VV + T L +N+C +Q F ++A + L+F + L R + +AQ Y++ V +P A P+ W + F + H++ T+A N L+R++ +RR R++E Sbjct: 232 KGGQQLRRAEPGEKDFPTRLYKPIFTPHAQLGDFGLGLGMYFSTLRALTVMTLIAGLLNLPNIFYFVSDDYNVATIPC-PDCNGTL---SGSRVVRATNGTDEMTFAL-KNNCDGAIEQVAFINLATLALIFFGTIGLNLYLRRMEIIYDEDEQTAQDYSIVVQNPPGDATSPEEWFKFFHESFDGAHMTACTIAVDNDLLVRSLVERRELLRKIE 442
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Match: A0A7S2PN30_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PN30_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.410e-8 Identity = 64/233 (27.47%), Postives = 107/233 (45.92%), Query Frame = 1 Query: 568 RVPPGQENRGAVAYGVWSTSWAQMGDFGLDVGMYFVTLAQLVGAVLVYAALCVVAIVHF-SSEQYSGQQAGVRPD-----LRGSAVCTSFLDV-----VAHNDAWSTSTSDLP-----------------RNDCPLDAKQGFADMAGVLL-----LFLLLLLLGKAQERAADYTETQVHSAQAYTVKVSSPDPLADDPDRWRRLFAQ-FG-HVSYVTVARGNGSLLRAMADRR 1161 + PG+ Y W+T Q+GDFG+ +G+YF+++ ++ + A L + ++H+ S+ YS G P+ LRGSA+CT + V V D + + + RN C + + + GV L +F+L LL K + + + T A ++++V+ P A DPD W + F++ FG V Y T+A N L+ A+A RR Sbjct: 162 KADPGETMLATELYSYWTTPEDQLGDFGIGIGIYFLSM-RIFSCICFIAGLLYIPLIHYYRSDDYSK---GPHPNRDSWVLRGSAICTHTMWVPCPTCVEDKDKFDQNRLAIGILETDGDDDGNEVYFALRNLCGGNNWEQGLNHLGVTLFMCVSIFVLSWLLHKGELKFDEDNLT----ASDFSIRVTDPPEDATDPDEWEQYFSEHFGARVVYCTIAMNNEKLIDALAKRR 386 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10261.275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10261.275.1 >prot_H-canaliculatus_F_contig10261.275.1 ID=prot_H-canaliculatus_F_contig10261.275.1|Name=mRNA_H-canaliculatus_F_contig10261.275.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=404bp MSAAVWDAEKGRAAGEEAAATLAAAAEAVAAAEAVGTWDPQSQSGVGFDSback to top mRNA from alignment at H-canaliculatus_F_contig10261:488..4695- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10261.275.1 ID=mRNA_H-canaliculatus_F_contig10261.275.1|Name=mRNA_H-canaliculatus_F_contig10261.275.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4208bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10261:488..4695- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10261:488..4695- >mRNA_H-canaliculatus_F_contig10261.275.1 ID=mRNA_H-canaliculatus_F_contig10261.275.1|Name=mRNA_H-canaliculatus_F_contig10261.275.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2424bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10261:488..4695- (Hapterophycus canaliculatus Oshoro5f female)back to top |