mRNA_H-canaliculatus_F_contig1026.274.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: D7FW32_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW32_ECTSI) HSP 1 Score: 639 bits (1647), Expect = 8.420e-225 Identity = 320/375 (85.33%), Postives = 345/375 (92.00%), Query Frame = 1 Query: 136 MAVASDVAPLLSKEREDEPGGLWATKQYGDLKEGDRLRAADYVTGSVEVRQLRSVYKLSFTDVVRVNRFKPAGVQEVATVSDEGSDESVAALKRAEREQNASVRLYVFLTKKKAKTRMTDLEETAFLLRVDIGKEGCICFGESFGDFDQGMLQVPNPTGYKGIVIAKRKTDEPTTDEPIIFAYARIVQRRRPVPASEVMLGLAEDKDRVTRYTKAAPIVKSDNDLLKGVRKYARTARKAWEAMSIPEDQNIDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTTSYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVWTRII 1260 MA+ASDVAPLLSKER DEPGGLWATKQYGDLKEGDRLRAADYVTGSVEVRQLRSVYKLSFTD+ RVNRFKP QE+A DE SDESVAAL+RAEREQNASVRLYVFLTKKKAKTRM DLEETAFLLR+++GKEGCICFG++FG+F+QGMLQVPNPTGYKGI IAKRK DEP TDEPII+AYARIV +RRPV ASEV+LGLAEDKDRVTRY KAAP VK+D+DLLKGVRKY RTARKAWEAMSIPEDQ IDFEGFK A DELNLVI+EG+AL+LF+ACDL TG IGVSELEVALM+HDVVPTTSYLTP+DSFNVFDLDGGGDISWVEFKEAAEVIA GKL E QTK+LFDKVDTDKSGVIEYEEFKQ W ++ Sbjct: 1 MALASDVAPLLSKERADEPGGLWATKQYGDLKEGDRLRAADYVTGSVEVRQLRSVYKLSFTDIARVNRFKPVEAQEIAMAGDEESDESVAALRRAEREQNASVRLYVFLTKKKAKTRMADLEETAFLLRLEVGKEGCICFGDTFGNFEQGMLQVPNPTGYKGIAIAKRKADEPKTDEPIIYAYARIVPKRRPVVASEVVLGLAEDKDRVTRYAKAAPTVKTDDDLLKGVRKYTRTARKAWEAMSIPEDQGIDFEGFKLAFDELNLVIMEGRALQLFKACDLSGTGMIGVSELEVALMMHDVVPTTSYLTPLDSFNVFDLDGGGDISWVEFKEAAEVIAGGKLNEEQTKELFDKVDTDKSGVIEYEEFKQAWLAMV 375
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A6H5JF42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF42_9PHAE) HSP 1 Score: 635 bits (1637), Expect = 5.470e-216 Identity = 318/375 (84.80%), Postives = 345/375 (92.00%), Query Frame = 1 Query: 136 MAVASDVAPLLSKEREDEPGGLWATKQYGDLKEGDRLRAADYVTGSVEVRQLRSVYKLSFTDVVRVNRFKPAGVQEVATVSDEGSDESVAALKRAEREQNASVRLYVFLTKKKAKTRMTDLEETAFLLRVDIGKEGCICFGESFGDFDQGMLQVPNPTGYKGIVIAKRKTDEPTTDEPIIFAYARIVQRRRPVPASEVMLGLAEDKDRVTRYTKAAPIVKSDNDLLKGVRKYARTARKAWEAMSIPEDQNIDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTTSYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVWTRII 1260 MA+ASDVAPLLSKER DEPGGLWATKQYGDLKEGDRLRAADY+TGSVEVRQLRSVYKLSFTD+ RVNRFKPA QE+A DE SDESVAAL+R EREQNASVRLYVFLTKKKAKTRM DLEETAFLLR+++GKEGCICFG++FG+F+QGMLQVPNPTGYKGI IAKRK DEP TDEPII+AYARIV +RRPV ASEV+LGLAEDKDRVTRYTKAAP VK+D+DLLKGVRKY RTARKAWEAMSIPED+ IDFEGFK A DELNLVI+EG+AL+LF+ACDL TG IGVSELEVALM+HDVVPTTS+LTP+DSFNVFDLDGGGDISWVEFKEAAEVIA GKL E QTK LFDKVDTDKSGVIEYEEFKQ W ++ Sbjct: 1 MALASDVAPLLSKERADEPGGLWATKQYGDLKEGDRLRAADYITGSVEVRQLRSVYKLSFTDIARVNRFKPAEAQEIAMPGDEESDESVAALRRTEREQNASVRLYVFLTKKKAKTRMADLEETAFLLRLEVGKEGCICFGDTFGNFEQGMLQVPNPTGYKGIAIAKRKADEPKTDEPIIYAYARIVPKRRPVVASEVVLGLAEDKDRVTRYTKAAPTVKTDDDLLKGVRKYTRTARKAWEAMSIPEDKKIDFEGFKLAFDELNLVIMEGRALQLFKACDLSGTGMIGVSELEVALMMHDVVPTTSHLTPLDSFNVFDLDGGGDISWVEFKEAAEVIAGGKLNEEQTKGLFDKVDTDKSGVIEYEEFKQAWLAMV 375
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A836CDR4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDR4_9STRA) HSP 1 Score: 224 bits (571), Expect = 5.380e-62 Identity = 145/408 (35.54%), Postives = 212/408 (51.96%), Query Frame = 1 Query: 169 SKEREDEPGGLWATKQYGDLKEGD--RLRAAD-------------------------YVTGSVEVRQLRSVYKLSFTDVV-----RVNRFKPAGVQEVATVSDEGSDESVAALKRAEREQNA------SVRLYVFLTKKKAKTRMTDLEETAFLLRVDIGKEGCICFGESFGDFDQGMLQVPNPTGYKGIVIAKRKTDEPTTDEPIIFAYARIVQRRRPVPASEVMLGLAEDKDRVTRY----TKAAPIVK-SDNDLLKGVRKYARTARKAWEAMSIPEDQNIDFEGFK-QALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTTSYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVWTRII 1260 S +R EP GLW +QYGD + GD +LRAA VTGSVEVRQLRS+ KLSF ++ + AG T+S + L+ A + + + +LY +LTKKK K RM DLEET FLL +D +G IC ++G FDQ +L VP+ + Y G VI KR D P T+EP++ +AR++Q+RRP+ A+ LG+ +DKDRV R+ T AP K SD +L++ V+ YART++ AW+A+ + + + + Q LD+LN+V++E +ALRLF+ CDL TG IG++E E A+++ P + + D +A L E L++K+ G + YE FKQ W ++ Sbjct: 26 STKRAGEPDGLWVARQYGDFEPGDLRKLRAATATRGNTPAQAGDVPLSPHQQPDKELIVTGSVEVRQLRSMLKLSFVNLALQSASTKSEANAAGGSSTGTLSLRSGADLAEQLEAALSDTGSVGVEQWAPKLYCYLTKKKPKARMADLEETGFLLLMDSSSDGSICQAPAYGSFDQSLLHVPSASEYCGAVIVKRAQDAPVTEEPVVLGFARLLQQRRPLVAAAAALGMQDDKDRVQRFDATKTDTAPATKKSDKELMRDVKMYARTSKMAWQALCVQVHFSHNSHMYLIQGLDQLNIVVLESRALRLFQQCDLQGTGRIGLTEFEAAMVLGGSRPKRNDASNAD------------------------LAHDPLNEVALLALYNKMLPSPYGEMAYEHFKQAWLELV 409
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A8J2X2P9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2P9_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.890e-50 Identity = 128/385 (33.25%), Postives = 192/385 (49.87%), Query Frame = 1 Query: 163 LLSKEREDEPGGLWATKQYGDLKEGDRLRAADYVTGSVEVRQLRSVYKLSFTDVVRVNRFKPAGVQEVATVSDEGSDESVAALKRAEREQNASVRLYVFLTKKKAKTRMTDLEETAFLLRV--DIGKEGCICFGES-FGDFDQGMLQVP-NPTGYKGIVIAKRKTDEPTTDEPIIFAYARIVQRRRPVPASEVMLGLAEDKDRVTRYTKAAPIVKSDNDL-LKGVRKYARTA----RKAWEAMSIPEDQNIDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTTSYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKD----------LFDKVDTDKSGVIEYEEFKQVWTRII 1260 +LS ER GLW ++YGD GD+ A +VTG VE+RQL ++KLSF + +A + A+ + ++ VFLT+KKAK RM DLEET + + + D+ K G +C G++ G FD + P NP Y+G+ IAK D P T+EP ++ + R V R + +E +LGL E++D + T I+ D K ++ Y RTA RKAW+A+ + E+Q I F+ FK+ALD L+L ++E +A+ MI+D P LTP D+F +FDLD G I+ F+ + G+ +T D FDK+D D+SG I Y F+ W +++ Sbjct: 10 ILSSERAQLVDGLWTIQKYGDFAPGDKRLARVFVTGRVEMRQLGGLFKLSF--------------------------DGLAVQRLADNPSQSPLKAKVFLTRKKAKKRMADLEETGYSVPISRDLDKNGFVCSGDATLGTFDLTLRNAPDNPLLYRGLCIAKSAQDTPLTEEPAVYGFVRFVDDRPQITTTENVLGLHENEDLMGNKT----IMHDGTDSKYKPIQAYTRTALRRARKAWKALELAEEQQIGFDEFKRALDLLDLTLLETRAMXXXXXXXXXXXXXXXXXXXXXXXMINDSTPDLG-LTPNDAFRMFDLDQTGKITKTAFRRVIGALGAGEKLPGKTVDSEERKMAIEAFFDKLDLDRSGEISYTTFRSAWVKLV 363
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A2R5GPP8_9STRA (Leucine-rich repeat-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPP8_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.680e-25 Identity = 68/233 (29.18%), Postives = 117/233 (50.21%), Query Frame = 1 Query: 553 FGESFGDFDQGM-LQVPNPTGYKGIVIAKRKTDEPTTDEPIIFAYARIVQRRRPVPASEVMLGLAEDKDRVTRYTKAAPIVKSDNDLLKGVRKYARTARKAWEAMSIPEDQNIDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTTSYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVW 1248 FG++ +FD V +P + G+ + K +P + P + YA++ ++ ++ + + ++A + G+R R R IDFE FK A++ L L + E + +LF+ACDL R+GT+ + EL +AL I+D + + +TP D+F +FD DG G I+ EF E ++ +T + +F + DTD SG IEY+EF+++W Sbjct: 278 FGDTCFEFDSEFPTMVSSPLEWTGVALVKCAETKPVSLYPAVLFYAKLAVIHEKKKTAKKKADAVKEAENIQEKMRSATTWEPGL----GLRTIRRLLRSKLRYFDRNGSNTIDFEEFKAAMENLGLFLTETRLQKLFQACDLDRSGTVELDELPLALHINDQLRVRTRMTPRDAFELFDYDGSGSINEQEFFEVVNLLPVASMTRERAGKVFARHDTDNSGEIEYDEFREIW 506
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A7R9U7B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7B5_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.360e-20 Identity = 49/130 (37.69%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 613 YKGIVIAKRKTDEPTTDEPIIFAYARIVQRRRPVPASEVMLGLAEDKDRVTRYTKAAPIVKSDNDLLKGVRKYARTARKAWEAMSIPEDQNIDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGV 1002 + G VI K K + P + EP+I+A+AR+ RRP+P ++V LG+A DKD + R + S L+ + YAR A+KAW + ED+ + F FK+ALD L+++++E +A +LF +L G +G+ Sbjct: 5 FVGCVIIKPKAEAPLSKEPVIYAFARLAYERRPLPQTDVRLGIALDKDEIARIRRLGA---SGKHRLRSLGFYARNAKKAWRDLDKAEDEPLSFIEFKRALDRLDILVLESRAKKLFGLNNLDGAGALGM 131
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A6A5AEZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AEZ5_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.740e-15 Identity = 58/182 (31.87%), Postives = 99/182 (54.40%), Query Frame = 1 Query: 742 AEDKDRVTRYTKAAPIVKSDNDLLKGVRKYARTARKAWEAMSIPEDQN----IDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTT---------SYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVW 1248 ++D + RY + V D+++ K A ++ E M + D++ I + F + L +L + + + +A+R+F+ CD +G I + E ++A+ + D PTT S LTP D+F++FD +G G + +EF +A E +T+A+ + LF K DTDKSG IEY EF+ +W Sbjct: 22 SDDDAAIERYDRDD--VSEDDEVYKSRNVDALLSKMTPEEMFVKFDEDHSGMISTDEFLKMLPQLGIKLSDAKAIRIFDTCDKDGSGEIDMEEFKMAMFMVD--PTTGNSLGFSPSSLLTPKDAFHLFDSNGSGQLDELEFADALEYFGFS-VTDAKQERLFLKYDTDKSGFIEYSEFRAMW 198
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: W4H9F4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9F4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.170e-14 Identity = 58/182 (31.87%), Postives = 99/182 (54.40%), Query Frame = 1 Query: 742 AEDKDRVTRYTKAAPIVKSDNDLLKGVRKYARTARKAWEAMSIPEDQN----IDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTT---------SYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVW 1248 ++D + RY + V D+++ K A ++ E M + D++ I + F + L +L + + + +A+R+F+ CD +G I + E ++A+ + D PTT S LTP D+F++FD +G G + +EF +A E +T+A+ + LF K DTDKSG IEY EF+ +W Sbjct: 60 SDDDAAIERYDRDD--VSEDDEVYKSRNVDALLSKMTPEEMFVKFDEDHSGMISTDEFLKMLPQLGIKLSDAKAIRIFDTCDKDGSGEIDMEEFKMAMFMVD--PTTGNSLGFSPSSLLTPKDAFHLFDSNGSGQLDELEFADALEYFGFS-VTDAKQERLFLKYDTDKSGFIEYSEFRAMW 236
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A024UUX4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUX4_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.760e-14 Identity = 48/130 (36.92%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 886 IDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTT---------SYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVW 1248 I + F + L +L + + + +A+R+F+ CD +G I + E ++A+ D PTT S LTP D+F++FD +G G + +EF +A E ++T+A+ + LF K DTDKSG IEY EF+ +W Sbjct: 116 ISTDEFIKMLPQLGIKLSDAKAIRIFDTCDKDGSGEIDLEEFKMAMFTVD--PTTGNSLGFSPSSLLTPKDTFHLFDSNGSGQLDELEFADALEYFGF-RVTDAKQERLFQKYDTDKSGFIEYSEFRAMW 242
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Match: A0A6G0XXD3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXD3_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.660e-13 Identity = 49/136 (36.03%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 874 EDQN--IDFEGFKQALDELNLVIVEGQALRLFEACDLGRTGTIGVSELEVALMIHDVVPTT---------SYLTPMDSFNVFDLDGGGDISWVEFKEAAEVIARGKLTEAQTKDLFDKVDTDKSGVIEYEEFKQVW 1248 EDQ+ I + F + L +L + + +A+R+F++CD +G I + E ++A+ D P T S LTP D+F++FD +G G + +EF +A E +++A+ + LF K DTDKSG IEY EF+ +W Sbjct: 107 EDQSGMISRDEFVKMLPQLGIKLSNAKAIRIFDSCDKDGSGEIDLEEFKMAMFAVD--PNTGNTLGFAPSSLLTPKDAFHLFDSNGSGKLDELEFADALEYFGMD-VSDAKQEKLFHKYDTDKSGFIEYSEFRAMW 239 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1026.274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1026.274.1 >prot_H-canaliculatus_F_contig1026.274.1 ID=prot_H-canaliculatus_F_contig1026.274.1|Name=mRNA_H-canaliculatus_F_contig1026.274.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=376bp MAVASDVAPLLSKEREDEPGGLWATKQYGDLKEGDRLRAADYVTGSVEVRback to top mRNA from alignment at H-canaliculatus_F_contig1026:28078..31142+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1026.274.1 ID=mRNA_H-canaliculatus_F_contig1026.274.1|Name=mRNA_H-canaliculatus_F_contig1026.274.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3065bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1026:28078..31142+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1026:28078..31142+ >mRNA_H-canaliculatus_F_contig1026.274.1 ID=mRNA_H-canaliculatus_F_contig1026.274.1|Name=mRNA_H-canaliculatus_F_contig1026.274.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2256bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1026:28078..31142+ (Hapterophycus canaliculatus Oshoro5f female)back to top |