mRNA_H-canaliculatus_F_contig1026.273.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: D7FW33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW33_ECTSI) HSP 1 Score: 575 bits (1482), Expect = 1.840e-198 Identity = 322/466 (69.10%), Postives = 356/466 (76.39%), Query Frame = 2 Query: 53 MFHRGCLRGIFIGCSAASGGAFVLNPAGH---VIALRQTGSTTATPAAQVEPS-RCGSRRPPWVLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFHPSFAGA-TDAVADTFATG-GAGLPIPLAISELLADPVGSLAANPEWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYADERVLKALYAVFMLALSGYLLLDDQGSESLIPEECSVEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGGEDVPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVESLLAMTSAS 1432 M H CL G+F+ CSA +GGAF+LNPA + +++Q T AA VE + RC SR P VLA XX + HP+ AGA TD +A G GAGL I IS++LADP +LAANPEWTRYAFMFPVGILVATCAQTAGIGGAA+ P FLLG PLLGP YPLHSVAASVATAIL EAFGFSSGL+GYFRRGLID GSA+PFILAS+P+CLLGALIVPYADERVLKA+YAVFML LS YLLLD+QGSESL+PEECSVEELESG+MKAIC+SEG EY+Y+KPDFG GLS+AFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTS+LVVFLNAVVAAGTQIGGIVSRGGEDVPWNLIAFIVPGVVIGGQLAP+MQGRLSQRTMEKVLAGVFG VG TFA ISV++LL++TS S Sbjct: 1 MIHTRCLGGVFLVCSAVNGGAFLLNPAARHDVITSVQQQRDARTTTAALVERTGRCRSRVPSRVLAT---------------DGDSNEAALASENVRYSTGKAVVGAAATAAAXXAVAIVSHPAAAGAATDVLAAGAEVGAGAGLQISATISQVLADPASALAANPEWTRYAFMFPVGILVATCAQTAGIGGAALTAPVFLLGFPLLGPDYPLHSVAASVATAILCEAFGFSSGLLGYFRRGLIDPGSALPFILASIPSCLLGALIVPYADERVLKAIYAVFMLGLSAYLLLDEQGSESLVPEECSVEELESGDMKAICTSEGTEYIYRKPDFGTGSGLSTAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSILVVFLNAVVAAGTQIGGIVSRGGEDVPWNLIAFIVPGVVIGGQLAPKMQGRLSQRTMEKVLAGVFGGVGVTFAAISVKTLLSLTSVS 451
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A6H5JHM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM5_9PHAE) HSP 1 Score: 273 bits (697), Expect = 4.070e-83 Identity = 168/298 (56.38%), Postives = 186/298 (62.42%), Query Frame = 2 Query: 53 MFHRGCLRGIFIGCSAASGGAFVLNP-AGHVIA-LRQTGSTTATPAAQVE-PSRCGSRRPPWVLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFHPSFAGATDAVADTFATG-----GAGLPIPLAISELLADPVGSLAANPEWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYADERVLKALYAVFMLALSGYLLLDDQG 922 M H CL G+ + CSA +G AF+LN A HV + ++ T AA VE SRC SR P VLA A+ S GA A AD A G GAGL I IS +LADP +LAANPEWTRYAFMFPVGILVATCAQTAGIGGAA+ P FLLG PLLGP YPLHSVAASVATAIL EAFGFSSGL+GYFRRGLID GSA+PFILAS+P+CLLGAL+VPYADERVLKA+YAVFML LS YLLLD+QG Sbjct: 1 MIHTRCLGGVLLVCSAVNGRAFLLNSSARHVTSSVQHQRDARTTAAALVERTSRCRSRVPSRVLAR-------------------DGDSSEAVLASEDVRYSAGKAVVGAAATAAAAAVAIVSHPGAAGAAADVLAVGAEVGAGAGLQISATISHVLADPASALAANPEWTRYAFMFPVGILVATCAQTAGIGGAALTAPVFLLGFPLLGPDYPLHSVAASVATAILCEAFGFSSGLLGYFRRGLIDPGSALPFILASIPSCLLGALVVPYADERVLKAIYAVFMLGLSAYLLLDEQG 279
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A3D2BR39_9PROT (Probable membrane transporter protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BR39_9PROT) HSP 1 Score: 261 bits (668), Expect = 1.390e-78 Identity = 135/297 (45.45%), Postives = 196/297 (65.99%), Query Frame = 2 Query: 533 EWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYADER--VLKALYAVFMLALSGYLLLDDQGSESLIPEECSVEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGG-EDVPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVESLL 1414 +WT+Y FMFPV + VATCA +GIGGAA+ P F++ PLLGP YPL + +A++ +A+++E FGFSSG +GY+R+ LID SAVPFI S+P +LGAL+ E+ +LK YA+ M+ L +L + L E +V E EM+ + +G +Y + KP G GG ++ G +TG LGVG+GEV++PQLVK+N VP+ VAA TSVL V + A+ TQI ++ GG VPWNL+ + +P V+IGGQ+ P +QGR++Q+ +EK +A VFG +G + A I +++ L Sbjct: 2 DWTQYWFMFPVAMCVATCAMLSGIGGAALFIPIFVIIFPLLGPEYPL-ATSAAIGSALMTEVFGFSSGFIGYYRKRLIDFKSAVPFISVSIPVAILGALMFGLLQEQEIILKGAYALLMMILCPVILRHTPTRDVLAVSEGNVAENSDAEMRKVTGRDGTKYRFNKPRQGIIGGFFTSIGAFLTGFLGVGVGEVILPQLVKRNNVPVAVAAATSVLTVIVTIASASFTQIAALIEAGGLSAVPWNLVCYTIPAVIIGGQIGPLIQGRIAQQKLEKAIAIVFGIIGVSMAWIVLKAAL 297
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A2E7I469_9PROT (Probable membrane transporter protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I469_9PROT) HSP 1 Score: 260 bits (664), Expect = 7.420e-78 Identity = 132/299 (44.15%), Postives = 198/299 (66.22%), Query Frame = 2 Query: 524 ANPEWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYAD--ERVLKALYAVFMLALSGYLLLDDQGSESLIPEECSVEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGGED-VPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVESL 1411 A+ +W RY FMFPV + VAT A +GIGGAA+ P FL+ P+LG Y L AA++ TA+++E FGFSSG VGY+R+ LI SA PF++ +LP ++GAL++ E +LKA YA+ ML L+ ++ Q S+ + + GE+ + +++G Y +KKP G GG ++ G +TG+LGVG+GEV++PQLVK+N VP+PVAA TSV +V + A+ TQ+ +++ GG + +PWNL+ + +PGV+IGGQ+ PR+QG++SQRTMEK +A +F +G I++ L Sbjct: 5 ADLDWGRYWFMFPVSMGVATTAMLSGIGGAALFAPIFLIIFPILGSEYVLAGTAAAIGTALMTEVFGFSSGFVGYYRKKLIHFRSAYPFLIVALPVAVVGALLLATLQHQEALLKAAYALLMLILAP-IIFRHQSSQGMGATTIEAAKGPGGELVRVAAADGQIYEFKKPRQGMGGGATTGVGSFLTGLLGVGVGEVIMPQLVKRNRVPVPVAAATSVFIVIVTIAAASFTQVSALIAAGGANAIPWNLVCYTIPGVIIGGQIGPRLQGKISQRTMEKTIATLFAIIGLAMGFIALREL 302
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A2E7PHJ1_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PHJ1_9PROT) HSP 1 Score: 261 bits (666), Expect = 1.160e-77 Identity = 136/306 (44.44%), Postives = 202/306 (66.01%), Query Frame = 2 Query: 503 DPVGSLAANPEWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYAD--ERVLKALYAVFMLALSGYLLLDDQGSESLIPEECSVEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGGED-VPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVESL 1411 DP+ LA + +WTRY FMFPV + VAT A +GIGGAA+ P FL+ P+LGP + L AA++ TA+++E FGFSSG VGY+R+ LI SA PF++ S+P ++GAL++ E +LK YA+ ML L+ ++ E ++ E E E ++ +++G Y +KKP GA G ++ G +TG+LGVG+GEV++PQLVK+N VP+PVAA TSV +V + A+ TQ+ +++ GG + +PWNL+ + +PGV+IGGQ+ PR+QG +SQRTMEK +A +FG +G I++ L Sbjct: 35 DPMEFLA-DLDWTRYWFMFPVSMGVATTAMLSGIGGAALFAPIFLIIFPILGPDFVLAGTAAAIGTALMTEVFGFSSGFVGYYRKKLIHFRSAFPFLMVSVPVAIVGALLLATLQYQEALLKGAYALLMLILAP-IIFRHHPPEQIVTEGQDEFEGTGREPISVTAADGQVYNFKKPKQGAGGAATTGVGSFLTGLLGVGVGEVIMPQLVKRNHVPVPVAAATSVFIVIVTIAAASFTQVSALIAAGGVNAIPWNLVCYTIPGVIIGGQIGPRLQGAISQRTMEKTIATLFGIIGLAMGFIALREL 338
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A2E7FAG1_9PROT (Probable membrane transporter protein n=2 Tax=unclassified Rhodospirillaceae TaxID=41296 RepID=A0A2E7FAG1_9PROT) HSP 1 Score: 258 bits (660), Expect = 2.970e-77 Identity = 138/300 (46.00%), Postives = 193/300 (64.33%), Query Frame = 2 Query: 533 EWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYADE--RVLKALYAVFMLALSGYLLLDDQGSESLIPEECS-----VEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGGED-VPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVES 1408 +WT Y FMFPV ILVAT A +GIGGAAI P FL+ PLLGP YPL S+AA++ A+ +E FGFSSG VGY+R+GLID SA+PFI+ +P ++GAL++ E L+A Y + ML L ++ + E + + EE ++ E + I +G Y Y P G G ++ FG +TG+LGVGIGEVV+PQLVK N VP+PVAA TSV V + A+ TQI ++++GG + VPWN++ + +P V+IGGQ+ PR+QG++ QRTMEK +A +F +G I+V + Sbjct: 7 DWTLYWFMFPVAILVATSAMLSGIGGAAIFAPIFLIIFPLLGPEYPLGSLAAAIGVALFTEVFGFSSGFVGYYRKGLIDFKSAIPFIVVGVPIGIIGALMLNALSEYEEALRAAYGILMLVLFYVIIKVHESKEDMAKAQTESAWRGTEEDDTRETRTITGRDGATYTYGAPRQGK-GAAATGFGAFLTGLLGVGIGEVVMPQLVKSNKVPIPVAAATSVFTVIVVVASASFTQISALIAQGGVNAVPWNVVVYTIPAVIIGGQIGPRLQGKVKQRTMEKAIAYLFLMIGTAMTWIAVRN 305
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A2E8XRX4_9PROT (Probable membrane transporter protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XRX4_9PROT) HSP 1 Score: 256 bits (655), Expect = 1.560e-76 Identity = 132/299 (44.15%), Postives = 195/299 (65.22%), Query Frame = 2 Query: 524 ANPEWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYADER--VLKALYAVFMLALSGYLLLDDQGSESLIPEECSVEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGGED-VPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVESL 1411 A+ +WTRY FMFP+ + VAT A +GIGGAA+ P FL+ P+LGP + L AA++ TA+++E FGFSSG VGY+R+ LI SA PF++ ++P ++GAL++ E+ +LK YA+ ML L+ + E L E + E +I +++G Y +KKP G DG ++ G +TG+LGVGIGEV++PQLVK+N VP+PVAA TSV V + A+ TQ+ +++ GG + +PWNL+ + +PGV+IGGQ+ PR+QG +SQRTMEK +A +F +G I++ L Sbjct: 5 ADLDWTRYWFMFPISMAVATTAMLSGIGGAALFAPIFLIIFPILGPEFVLAGTAAAIGTALMTEVFGFSSGFVGYYRKKLIHFRSAYPFLIVAVPVAIVGALLLATFKEQEALLKGAYALLMLVLAPIIFKHHSPQEMLTEGEDHFAG-DGREPVSITAADGQTYNFKKPKQGVDGAATTGVGAFLTGLLGVGIGEVIMPQLVKRNHVPVPVAAATSVFTVIVVIAAASFTQVSALIAAGGMNAIPWNLVCYTIPGVIIGGQIGPRLQGTISQRTMEKTIATLFAIIGLAMGFIALREL 302
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A2E6GLR0_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GLR0_9PROT) HSP 1 Score: 253 bits (646), Expect = 2.250e-75 Identity = 128/286 (44.76%), Postives = 194/286 (67.83%), Query Frame = 2 Query: 533 EWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYADER--VLKALYAVFMLALSGYLLLDDQGSESLIPE-ECSVEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGGED-VPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVG 1378 +WT Y FMFPV I VAT A +GIGGAA+ P F++ P+LGP YPL + AA++ TA+++E FGFSSG +GY+R+ LID SA+PF+ S+P ++GA+++ Y E+ LK YA+ M+ L +L S + + + S+ + GEM+ + S+ G Y ++ P GA GG +++ G +TG+LGVGIGEV++PQLVK+N P+ VAA TSV V + A+ TQ+ +++ GG + +PWNL+ + +P V++GGQ+ P +QGR++QRTMEK +A +FG +G Sbjct: 2 DWTIYWFMFPVSICVATTAMLSGIGGAALFIPIFVIIFPILGPEYPLQT-AAAIGTALMTEVFGFSSGFIGYYRKRLIDFRSAIPFLFWSVPVAIIGAVLLGYLHEQDTFLKGAYAILMIVLCPIILRHTTPSNTTNSDNQESISTDDQGEMRTVTSNTGQTYKFRAPKVGALGGATTSGGAFLTGLLGVGIGEVIMPQLVKRNHFPVAVAAATSVFTVIITIAAASFTQVTALIAAGGINAIPWNLVCYTIPAVILGGQIGPWLQGRIAQRTMEKAIATLFGVIG 286
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A2S6TM75_9PROT (Probable membrane transporter protein n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6TM75_9PROT) HSP 1 Score: 249 bits (635), Expect = 1.270e-73 Identity = 132/297 (44.44%), Postives = 189/297 (63.64%), Query Frame = 2 Query: 533 EWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALIVPYADE--RVLKALYAVFMLALSGYLLLDDQGSESLIPEECSVEE--LESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGG-EDVPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVES 1408 +WT Y FMFPV I VAT A +GIGGAAI P F++ PLLGP YP S+AA++ A+L+E FGFSSG VGY+R+GLID SA+PFI +P ++GA+++ E VL+ YA+ ML LS Y+++ G P+ S + L + + I + +G +Y + P G GG ++ G +TG+LGVGIGEVV+PQLVK+N VP+PVA A+ TQI +++ GG VPWN++ + +P V+IGGQ+ PR+QG++SQRTMEK + +F VG + I++ + Sbjct: 7 DWTLYWFMFPVAICVATSAMLSGIGGAAIFAPIFMIIFPLLGPEYPFESIAAAIGVALLTEVFGFSSGFVGYYRKGLIDFRSAIPFIKVGVPIGIIGAILLGVLSEYEEVLRGSYALLMLILS-YIIIKHHGPHDAGPKTKSEVDGSLRKTKFRVINAKDGTKYEFSIPVQGKKGGSATGLGAFLTGLLGVGIGEVVMPQLVKRNNVPIPVAXXXXXXXXXXXXASASFTQISSLIAEGGMAAVPWNVVVYTIPAVIIGGQIGPRLQGKVSQRTMEKAIGYLFLVVGISMGWIAIRN 302
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Match: A0A2D7FLR8_9PROT (Probable membrane transporter protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLR8_9PROT) HSP 1 Score: 247 bits (631), Expect = 3.820e-73 Identity = 127/297 (42.76%), Postives = 191/297 (64.31%), Query Frame = 2 Query: 533 EWTRYAFMFPVGILVATCAQTAGIGGAAIMGPFFLLGLPLLGPAYPLHSVAASVATAILSEAFGFSSGLVGYFRRGLIDAGSAVPFILASLPACLLGALI--VPYADERVLKALYAVFMLALSGYLLLDDQGSESLIPEECSVEELESGEMKAICSSEGVEYLYKKPDFGADGGLSSAFGGLMTGMLGVGIGEVVIPQLVKKNGVPLPVAAGTSVLVVFLNAVVAAGTQIGGIVSRGGED-VPWNLIAFIVPGVVIGGQLAPRMQGRLSQRTMEKVLAGVFGAVGATFATISVESLL 1414 +WT+Y FMFP+ VAT A +GIGGAA+ P F++ PLLGP YPL + AA++ +A+++E FGFSSG VGY+R+ LID SA+PF+ S+P + GAL+ V E LK YA+ ML L +L + L E S S E++ I +G Y +++P G G + ++ G +TG LGVG+GEV++PQL+K+N +P+ VAA TSVL V A+ TQ+ ++ GG D +PWNL+ + +P V+IGGQ+ P +QG++SQR +EK +A +FG +G + I +++++ Sbjct: 2 DWTQYWFMFPIATCVATMAMLSGIGGAALFIPIFVIIFPLLGPEYPL-TTAAAIGSALMTEVFGFSSGFVGYYRKRLIDFNSAIPFLCVSVPVAIAGALMFGVLQQQETFLKGAYALLMLILCPIILRHTPAKDMLFESEDSNAINASTELREITDHDGRTYRFRRPKQGVFGVIYTSIGSFLTGFLGVGVGEVILPQLIKRNRIPVAVAAATSVLTVIFTIASASFTQVAALIEAGGIDAIPWNLVCYTIPAVIIGGQIGPLLQGKISQRKLEKAIAILFGLIGLSMGWIVLKTMI 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1026.273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1026.273.1 >prot_H-canaliculatus_F_contig1026.273.1 ID=prot_H-canaliculatus_F_contig1026.273.1|Name=mRNA_H-canaliculatus_F_contig1026.273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=463bp MFHRGCLRGIFIGCSAASGGAFVLNPAGHVIALRQTGSTTATPAAQVEPSback to top mRNA from alignment at H-canaliculatus_F_contig1026:23380..27905- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1026.273.1 ID=mRNA_H-canaliculatus_F_contig1026.273.1|Name=mRNA_H-canaliculatus_F_contig1026.273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4526bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1026:23380..27905- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1026:23380..27905- >mRNA_H-canaliculatus_F_contig1026.273.1 ID=mRNA_H-canaliculatus_F_contig1026.273.1|Name=mRNA_H-canaliculatus_F_contig1026.273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2778bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1026:23380..27905- (Hapterophycus canaliculatus Oshoro5f female)back to top |