|
Homology
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: D7G5K3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K3_ECTSI) HSP 1 Score: 187 bits (476), Expect = 8.200e-54 Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 3
Query: 234 QVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDEVR 521
Q+VESEVKEEFVK MA TLDWGALCKAA+EVGMPEGSLPPALTPELLEDSSFL+ALHRVLMDMHVVEGTLVCPETGRRFPI EGVPNLMCTEDEVR
Sbjct: 30 QMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEVR 125
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: A0A836CHT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHT2_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.900e-26 Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 3
Query: 234 QVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDE 515
Q+ ES + +FVK +A TL+W AL +A +VG+PE LP A++ LL D +FL+ALHRVLMD+HVV G LVCPE+GRRFPI G+P++M E E
Sbjct: 30 QMEESPFRPDFVKHIAPTLNWPALRQAVKQVGLPEDMLPEAVSDALLGDEAFLRALHRVLMDVHVVAGALVCPESGRRFPIAHGIPDMMIAEGE 123
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: B5Y448_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y448_PHATC) HSP 1 Score: 101 bits (252), Expect = 7.000e-22 Identity = 43/84 (51.19%), Postives = 65/84 (77.38%), Query Frame = 3
Query: 264 FVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDE 515
FV+ + +TLDW AL +AAS++G+P +LPP LT +L ED FL+ALH VLM++H+++G L CP TGR FP+ +G+PN++ E++
Sbjct: 45 FVEGLLSTLDWSALIEAASQLGIP--TLPPVLTEDLAEDPEFLEALHHVLMNVHLIQGILTCPATGREFPVRDGIPNMVLEEED 126
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: A0A4Y7LSC5_9CRUS (Multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LSC5_9CRUS) HSP 1 Score: 99.8 bits (247), Expect = 2.680e-21 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 3
Query: 234 QVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDEV 518
+V E E +F+ +M +DW ALCKAA VG E LPPA+ + + FL+ H LM++ V+ G LVCPETGR+FP+T+G+PN++ EDEV
Sbjct: 31 KVSEVEFNPDFISRMILKVDWPALCKAAENVGHAE-DLPPAVVDDYENNQDFLKKAHHALMEIEVINGDLVCPETGRKFPVTDGIPNMLANEDEV 124
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: A0A210QVU1_MIZYE (Multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QVU1_MIZYE) HSP 1 Score: 100 bits (248), Expect = 2.910e-21 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 3
Query: 234 QVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDEV 518
+V + EF+ +M +DW ALC+AA VG EG LP ALT + ED L+ +H VLM + V+EG LVCPETGR+FPI+ G+PN++ EDEV
Sbjct: 45 EVKTVDFNPEFISRMLPKIDWPALCQAAQSVGHGEG-LPEALTEKYEEDEMLLKKVHHVLMQVEVLEGNLVCPETGRQFPISSGIPNMLLNEDEV 138
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: A0A182Q4Q9_9DIPT (Multifunctional methyltransferase subunit TRM112-like protein n=11 Tax=Cellia TaxID=44534 RepID=A0A182Q4Q9_9DIPT) HSP 1 Score: 98.6 bits (244), Expect = 6.490e-21 Identity = 44/96 (45.83%), Postives = 65/96 (67.71%), Query Frame = 3
Query: 231 RQVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDEV 518
+++V ++ EF+ +M LDWGA+C AA+ VG +P ++ ++ D+ LQ LH +L+++ VVEGTL CPETGR FPI GVPN++ EDEV
Sbjct: 30 KKIVNADFNSEFITRMLPRLDWGAICMAATNVG---SDIPASMPSDIQNDAETLQKLHHILLEVDVVEGTLECPETGRIFPINNGVPNMLLNEDEV 122
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: UPI001EB047F1 (multifunctional methyltransferase subunit TRM112-like protein n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB047F1) HSP 1 Score: 98.6 bits (244), Expect = 6.870e-21 Identity = 48/95 (50.53%), Postives = 62/95 (65.26%), Query Frame = 3
Query: 234 QVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDEV 518
+V + + EFV +M LDW ALC AASEVG E +LP L D FL+ H VLM + V+EG LVCPE+GR+FPI+ G+PN++ EDEV
Sbjct: 31 EVKDVDFNPEFVSRMIPKLDWSALCSAASEVGHSE-NLPADLGESYETDQEFLKRAHHVLMQVEVIEGNLVCPESGRKFPISNGIPNMLLNEDEV 124
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: W7TQC2_9STRA (TRM112-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC2_9STRA) HSP 1 Score: 100 bits (248), Expect = 7.710e-21 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 3
Query: 234 QVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDEV 518
+V E+E EFV+ + +DW AL A+ E+GM E LP + D SFLQ +H++L+D+HV+EG+LVCPETGRRFPI G+PN++ EDEV
Sbjct: 81 EVKETEFNSEFVQNLLPKVDWPALRGASKELGMDE--LPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: A0A803QXK8_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QXK8_CANSA) HSP 1 Score: 97.8 bits (242), Expect = 1.220e-20 Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 3
Query: 219 RLRFRQVVESEVK--EEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDEV 518
R+ +VVE EV+ +F+K M + +DW AL +AA +G E LP + P +L+ FL+ H L+ +H+ EG L+CPETGRRFP+T+G+PN++ EDEV
Sbjct: 23 RIEVVKVVEKEVELNPDFLKSMFSKIDWKALVEAARSIGYTE--LPNEVDPSMLDSDDFLRRFHHALLQLHLEEGALICPETGRRFPVTKGIPNMLLHEDEV 122
BLAST of mRNA_H-canaliculatus_F_contig1025.262.1 vs. uniprot
Match: A0A2P6VL84_9CHLO (Multifunctional methyltransferase subunit TRM112 At1g22270 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL84_9CHLO) HSP 1 Score: 97.8 bits (242), Expect = 1.220e-20 Identity = 43/94 (45.74%), Postives = 69/94 (73.40%), Query Frame = 3
Query: 234 QVVESEVKEEFVKQMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEGVPNLMCTEDE 515
+V E++ + +F++ + + W ALC+AA+ +G+ EG LP T E+LED +F++ H L+++H+ EG LVCPETGR+FP++ G+PNL+ TEDE
Sbjct: 30 EVQEADFEPDFLQHIFPRIQWAALCEAAAAMGV-EG-LPAEATEEMLEDDAFMKKFHHALLEVHLQEGALVCPETGRKFPVSAGIPNLLLTEDE 121
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 187.6 |
Seed ortholog evalue | 4.7e-45 |
Seed eggNOG ortholog | 2880.D7G5K3 |
Preferred name | TRMT112 |
KEGG ko | ko:K15448 |
GOs | GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0009451,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0018364,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030488,GO:0031167,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0036265,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0046982,GO:0046983,GO:0048471,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0080090,GO:0090069,GO:0090070,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:2000232,GO:2000234 |
EggNOG free text desc. | peptidyl-glutamine methylation |
EggNOG OGs | KOG1088@1,KOG1088@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko03012,ko03016 |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | Uncharacterised protein family UPF0434/Trm112 |
Ec32 ortholog | Ec-22_000960.1 |
Exons | 3 |
Model size | 1686 |
Cds size | 489 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928654.171133-UTR-H-canaliculatus_F_contig1025:19449..20611 | 1622928654.171133-UTR-H-canaliculatus_F_contig1025:19449..20611 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1025 19450..20611 - |
1696845515.4038682-UTR-H-canaliculatus_F_contig1025:19449..20611 | 1696845515.4038682-UTR-H-canaliculatus_F_contig1025:19449..20611 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1025 19450..20611 - |
1622928654.2219005-UTR-H-canaliculatus_F_contig1025:25679..25714 | 1622928654.2219005-UTR-H-canaliculatus_F_contig1025:25679..25714 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1025 25680..25714 - |
1696845515.4526045-UTR-H-canaliculatus_F_contig1025:25679..25714 | 1696845515.4526045-UTR-H-canaliculatus_F_contig1025:25679..25714 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1025 25680..25714 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928654.1906378-CDS-H-canaliculatus_F_contig1025:20611..20636 | 1622928654.1906378-CDS-H-canaliculatus_F_contig1025:20611..20636 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1025 20612..20636 - |
1696845515.4180307-CDS-H-canaliculatus_F_contig1025:20611..20636 | 1696845515.4180307-CDS-H-canaliculatus_F_contig1025:20611..20636 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1025 20612..20636 - |
1622928654.20055-CDS-H-canaliculatus_F_contig1025:21778..21954 | 1622928654.20055-CDS-H-canaliculatus_F_contig1025:21778..21954 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1025 21779..21954 - |
1696845515.430909-CDS-H-canaliculatus_F_contig1025:21778..21954 | 1696845515.430909-CDS-H-canaliculatus_F_contig1025:21778..21954 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1025 21779..21954 - |
1622928654.2103772-CDS-H-canaliculatus_F_contig1025:25391..25679 | 1622928654.2103772-CDS-H-canaliculatus_F_contig1025:25391..25679 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1025 25392..25679 - |
1696845515.442012-CDS-H-canaliculatus_F_contig1025:25391..25679 | 1696845515.442012-CDS-H-canaliculatus_F_contig1025:25391..25679 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1025 25392..25679 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1025.262.1 >prot_H-canaliculatus_F_contig1025.262.1 ID=prot_H-canaliculatus_F_contig1025.262.1|Name=mRNA_H-canaliculatus_F_contig1025.262.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=163bp
MTITPTHRGTRGSRPRFTSAPGGPPGRSGHPANRETIRSSGVPAFKYNTM LTARSSSSSSFRLRFRQVVESEVKEEFVKQMANTLDWGALCKAASEVGMP EGSLPPALTPELLEDSSFLQALHRVLMDMHVVEGTLVCPETGRRFPITEG VPNLMCTEDEVR* back to topmRNA from alignment at H-canaliculatus_F_contig1025:19450..25714- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1025.262.1 ID=mRNA_H-canaliculatus_F_contig1025.262.1|Name=mRNA_H-canaliculatus_F_contig1025.262.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6265bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1025:19450..25714- (Hapterophycus canaliculatus Oshoro5f female) CGAGACCAGACAAAAAAACAAGGGAACCCACCAGCATGACAATCACACCG
ACACACCGGGGTACTCGTGGTTCGAGGCCGCGATTTACGTCGGCACCGGG
GGGACCTCCCGGTCGTTCCGGGCACCCCGCAAACCGCGAGACTATCCGTA
GCTCTGGAGTCCCGGCCTTCAAATACAACACCATGTTAACGGCTCGATCT
TCCTCCTCGTCATCTTTCCGTCTCCGGTTTCGACAGGTGGTGGAATCGGA
GGTTAAAGAGGAGTTCGTGAAGCAAATGGCGAACACCTTAGACTGGGGAG
CTCTCTGCAAAGCGGCGTCTGAGGTAAAGAAGCGTGAGCTGTGCTTGACG
AGTAGCAACCCGGGTTCACGATTGGACACATGATCGAACCACGCGCCTCA
CGGAATCAGTACCTACCTGTCAGAGGTTCCAAGCCTCTCTCGTATTCTCG
CGACCGAATCAATGATACCGGTAGTTCTCAGGCCGTAGTAACCAACCTCC
TCCTGCAATCACTTGACATCACCGTAAAAGTGCGAGTGAACGCACAGCAG
TGTGCGATCGACTTTTTGAATCCTTTCGAACTTTTTTTTCCGCACCCCCA
ATGCGACAACTCCGACATGAGCGATCCTGAGTAAATCAAAGCGATGGTAC
TAACTGGTGTTTCTAACGCATAGCCTGTGCGATAGCTCCGATGTGTGTAA
TAGCGAGCAAATTCAGAGCGAGCGCAGGTACCGATATTGAGAGGGCCTGC
GATCGTTTCGTGAATTGCAATCAACAACAGCACAACAAACCACACACACT
CTACTACCCAGCTCGCGGGGTCTTCGCTTGAAAGGAAAAAGCACGCACGG
CGGTGCGCACCAAACTACATCGAACATCATAAACGCGGAGAAAAGAGTTT
TCCCCGAAACGAGGGGAGGAACTATCGGTACGAAAATAAAAATCCCCGAA
ACAGAAATTGTGCAGGAAGCAACCACACGGACATTGCTTGCCGTACCAGG
GGACATGAACTCAAGCGTTGACCTTCCTACTGTGTGACTCTGGGTGGGAA
CGACATCCAACAAAAAGGTGTACTGTAGACAGATGGACCATAAAAGAGGG
ATGGCGATACATCTGCCCACAAAGAATTATCATTTCCATGTGTGCACTGG
TTCTCTGTATCAAAAACAATGTTGGAGCCTAGGTGATAGATCGCGACACA
AACACGCAGACCTTTGCAGCCCAAAGTGTGCCCCTGATCCTGCTCGCGAA
AGCATGCGATACCTTGTAGGGCTTATAAGTTCGGCATGTGAAGTTTCTGG
ACGCTTTGGACACTACCAATAAAATTGTGGCTTCTGTCAGTCCTTCTGAC
AGGCTCGCTTCCGCGCGGCACGCGCGTCCGCCACAAGACCTAGCCTTAGC
CACCACCCAGCGACCTAGGCCTAGCCAATGTATATCCCATGTACAGCGAC
AAAGTTCCGGGCCGTGGTTTGTGGTTAGGTTAAGCTTTTTTATAGAAAGA
AGTGGCCAATAAAAAAAAGAAACAACCCGGGTAGATTCGAACGACGTTGT
TTCGTTTTTCAGGACAGAAGTGTGATCGGTCTGGAGGTCGCGAGGCTATT
TTTTCCCGTCCTCCATCCACGACCGATCCTCCCCGCATTCGCCGGGCTAC
ATACTTGTAGCTTAATGGCCATGTCCGGAACATTCCAGGAATGTTCTCCA
TCACGCTTAGGTCGTATTCCCTCCCCTCAAGCGAGGTTCGGTCGGAGATT
CCGTAGTGTGCTAACGCTCCGACCCCTGTGCCAAAATCAAATTGAATTCT
TTCGAACTTGCTTTTGTTTTCGCACCCGTGTGCGATAACTCCGACCAGTG
CGCTCACTCTCATTTTTACAGCAGTCCTTCGAGCCTGTCCTCTCCCGACG
CGGGGTGTGCAGTCTGTGTGCTGACGGGATTGGATTTCTAGAAGCTCTAC
TGAAACAGATGGTTATGGCTTTCATGAAGGGCGAAGCGTGACTGCCGGGT
CAACTAAACCTATGCCACCCTCGATTCCAGCCATCTTTTCGAGGAACACT
ACGTGGCCATGACAGAGCTGCGGGTGATATCGATCGGTTACAGCCACTGG
TCCAGTGATGTGTGCTTATGAAGCAAGGCTAAAACAAATGTGCGTATCAC
TTGCAAGAGGATGCGCACAAAGAGTCACAGAATACTTACAAAATCAATCT
GCGCTTTTCGGAGAGAGACCTCAACGGCGAGAAATCACGGAACAGAGCCA
CAAAAGCGTTTGGACATTGTTTGGGACCAAGTAAGCGGGTGCGAGACAGC
GGTTTAGGCTGCCTCGCAATGGCTTTGCTGCATATCCGGTCTCCATCGGT
GTCGAATCGACCCTTTACCCACGATGATACACTCTTCGATGTAGTTCAAC
CTCGAAGAGCTTGACGTGGCGTGCACTTGAAGACGCTGTAATCGTACGAG
AGATGCCGAATTTGCACCTGATACGAAGAGAGCATGTAACATGGCGGCCG
CCTATCGAAAGCCTACTGATGGGAGTAAAATACTCAAGGTTGCACGTTTG
CGAGGGAATCCCCGGGGCGGGGCCGAATCCGTATCGCAGACCCAACGCTT
TTCGTCTCGGCACTCGCCGCTTCGTGATCCAGTCAGACAAACAGCGGGTC
ACAGTTCACCTTACTTCTTAATTGACCCGCGGATCGGGCGTCCTGTGCCC
GTACCGAACGGTGCAGCGGCGGCAAAGGTTCGGTCGAATTCCGTGCTTCG
GTTCGGAAGCGAAATGCCCCGGGAAACCGGCAACCTTCGAGGTCACGCCC
CAATCAGCAGGTATTCTCGTCCCAGCGTACCAGTAGCCGCTATGAACGAG
CAGCATGTTTGTGAATATGCATACACTGTGAAGATCGGCTCCTCCTGGTG
TCAGGACTTGGAAAACAGTCTTGGGGGCGTGGATTGAGCGTGATGGGATG
CCCCTAAGTGAGGTCGTGTTCAGGCCCTCGAGGATAAGAGGCACTTTGGA
CGCGATCCCGGTGATACCCCGAAAATGAGACCACCGGGGAGGGGTATTGA
TCGTCGTGGGGAAGACTCGATCCTTGTGGTGCTGTACGTCGACCAAATCT
GGCCTATAGTCGGCATTGGAGAACTCAACCACCCTTCGAGGCTACCACCA
TTCAGCCGTTCCGCTTGTCTCGGAAAAGGGCTAGAGATGTTCTCCCTTGC
GATGCTGACGCTTCTCTAGTCTCCGTTCGGGACGATATCGCGAGTCTTAA
AAAGCAGGATCCCCACCATGGCCCGATCCAAGACGCGGTGCAGAGTACAG
AAACCACGCGCTCTCTGTTCTGCTGCTGGCCGAGACACAAATGGGTATAG
TTGCTGCCCAGAAGGTCACAAATTTCACCCAAGCAGAGCATTTTCAACTG
CTGTACTTCCTGGAATGAGTCTCACTTTCGAAGGCTGATTACCCACGGCA
GAAATTACAGCAGGGCCACGTCGTTGGCTTCGATCTGGCTTTGGGAACTT
CTCGCCGTGGCTGCGGTCTTCCCGGTCACAGTCATAGGACTAGGGCCCAC
GGAGCAGAGTCCGAACGCGTAGTGATGAAAACGCCCGGGCTCTATTTAGC
ATCGACAACGATTGTTATGGATTTGGTTTCATCTCGTTCGCTCCGAAACG
CTCCATTAGTAAAAAAAAAAGGTTTCCTCGGCTTGACCCACTTTCCACTC
TCGCTTTTCTTCGAGGCATGCAACCTGAACCTCACCTTGGAAAAACTTAT
TTTCTTTCAGGTCGGGATGCCCGAAGGGTCTCTGCCCCCTGCGTTGACGC
CGGAGTTGCTGGAGGATTCCTCTTTCCTACAGGCGTTGCATCGGGTCTTG
ATGGACATGCATGTGGTGGAAGGAACCCTCGTCTGTCCAGAGACGGGTCG
CAGGTTTCCAATCACGGAGGGCGTGCCGAATCTCATGTAAGTTTCCCCGT
GTTCTCATCCGTTGCTGCTTTTGCTGATGCTGGCCACTTACGGGTGGCGT
TTCTTGCGCCAGTTTCCCCCCCGAAGCTGCATATATGCGCCAAGTATTAC
TTGTGTTACGGTTGTTGTTGAATATATTTACTATAGGTTGCCTATCCTAT
AAAGGAAAGAGTCGAAATCACGGAAGGAATGGCCTCTGATCCACGTCTCA
GCAGGAGTTTCAAGAGGTTTGTGTTTTACGCAGGAGTATTTCATTCAGCG
AGGATTCGGTGCTTTGTCCTGGATAAAATCATCAACAGAAGTACGAGTAG
CGGGTAGTGAGACTCGATTGGGAGGAATATGCTGAGTTGTTTGTTTTTGC
TTGCCGTGGTTCGAGGTGTTGCGATGATCTTGTTCGGTGACCAGTGAACA
ATTTAGATTACGGGGTAATAAACGGATGGTATCCTCGACCGAAGGGAGCG
CACACGGGTGCGGTGTGTGGCTCTTTAGGCCTACTTACGTTTCGCCGGTC
GTGTTTCTGCGGGATTGGCGCACCGCCCAAGCCGTGCTGAACCGCGGTCA
AGTTGACGTGCTTTCGTGTTTGCTGGTGGTGTCACTAGAGCCGTTCCATA
TATTAAGACTACGTGCCAGTCTCTCCGCCATGCCAGCGTGTCTGTGCTCT
CGTGATTCATCTGTCTGGAATCTTGTTTTCCTTCTTCCTTTCCTCCGCGG
GAGGTTGGGCTGCTGTTGCCTTAATGACTGCGAGTGCCATCTGCAGCAGT
CTGTTCTTGGTTCGTCGACGTGGTTTCGATGGGGGGTAGACCCTGACTAG
TGAAAAGCATTTTGGAAAGTTTCGAGTTGCTTCAATGGACCAGTTTCATG
GTGCTGTTAAAGACTGCTATGGGAAGACATTCGTGGCTGCACCTTCGATC
GGCGTCAAGCCCCTGTGCTTGTGCCCAAAATATGCGCACGATCGATCGTA
GCACATGTCAGTCGGAGCATGACAGGGGGTGGTAAGTGAGGCAAGCTCTG
TCGAAGGCTGACAACAAGCCTCAGGAAAAAGCAGTCTCCGGCATGCCTTC
CTTTCGTTCACAGCCTTCGAAATGAATATCACCCCCTTCCTGCATTTGCG
TCTTGGTTCTCAATTCGGTTTCGTACAGGTGCACGGAAGACGAGGTTCGA
TGACCATGGATACCAACAACAATTCTTCCGAAGAAATTTACGGCGTGAGG
AGGTGCGAGCGCCAAAGTTTCTTCTAGCCGAAGGTGTCACCCCTCTTCGC
TGCGGTGTGACACTTGCCCTTTACCTTCAATATCGAACGAAAAGAACGGC
GGTTTCCCGAGACCATGCCTCGCCTGTGGCAGGGAAGGACAGCAACAGGC
GGAACACAGGGAGGGACGGGGCACGGCGGCCTTGCCTCGCGTTCATCCCT
GAATGCAAGTGACAAAATAATCTCTTCCACCGTACCGTCCTCACCTCCGC
GGGGACCGCCGCCATAATTGGAGGGGCCGAGAGTTGATGGCCGTCAATTG
GGCAAGTTTTCTAGCAATGCACCGTTCGCTTTTGTGGCGCTGTGGTCAAA
AAGGTGCTCGGGTCGCAGACCTTTTTCGCGGGTGGGCATAGGCGTCGGGG
AAAAGAATGAGCTCTCACTGAGCACGGTCTTCCGTACGTCGGCATTGTTT
GACTCCCGTCCAACGGGACGTTGACGTGCCTCCTTCGCTTGGACTTGCTT
GTGATATTGTCGTGGCCACGCCAGGGAACGATGGCCGTGTGTCCAAGAGT
CGTTTTCCAGGGGGTGACTGGGGGGCGTGTGTTGTAGAGATGCGCGCTTC
CGACGTTGGGAGGCCAAATTTGCTGCCATTCTTCAAGCGATCCGACCACG
AGGACGAAAGTCGTCAAGGACGCCAGAGCTTTTGCGAGAGGGTTTCGTTC
ATATGTAGCGACATTATATCCGTATACGGAAGTGAGTTGCGCGAGGGAAC
GTTATCCCGCCGCACAGGCGTTCCTTCTCTTGCGCCCTTGTCTCGTCTCC
CGTTGATGGTCCAATGTACTATGTTTTAGGGGAAAACCAATCGGAGGCCA
TGGCGATAGGCTGGTGGTCCAAGAAAATCAATCGTGTCGAGTTTCTCGCT
TTCAAATGCCCTTCATCTTCGTCTCGCCTATTCTCCGCTTGACTGCTCGA
ATAGCTTCATCTTGGTCCTATCGGAGGCGGTAATTCTTGTGTGCGACGAC
GATTGTAGATTCCTTGCTGCAGCTGCTGCCACACGTGGGCCCTCGATGAG
TTTCTAGTTATGTTACATCTCGGAACTGGTGGCGAGGCGGAGTAATCTCT
CAAGATGTTGAAACC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1025:19450..25714- >mRNA_H-canaliculatus_F_contig1025.262.1 ID=mRNA_H-canaliculatus_F_contig1025.262.1|Name=mRNA_H-canaliculatus_F_contig1025.262.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=978bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1025:19450..25714- (Hapterophycus canaliculatus Oshoro5f female) ATGACAATCACACCGACACACCGGGGTACTCGTGGTTCGAGGCCGCGATT TACGTCGGCACCGGGGGGACCTCCCGGTCGTTCCGGGCACCCCGCAAACC GCGAGACTATCCGTAGCTCTGGAGTCCCGGCCTTCAAATACAACACCATG TTAACGGCTCGATCTTCCTCCTCGTCATCTTTCCGTCTCCGGTTTCGACA GGTGGTGGAATCGGAGGTTAAAGAGGAGTTCGTGAAGCAAATGGCGAACA CCTTAGACTGGGGAGCTCTCTGCAAAGCGGCGTCTGAGATGACAATCACA CCGACACACCGGGGTACTCGTGGTTCGAGGCCGCGATTTACGTCGGCACC GGGGGGACCTCCCGGTCGTTCCGGGCACCCCGCAAACCGCGAGACTATCC GTAGCTCTGGAGTCCCGGCCTTCAAATACAACACCATGTTAACGGCTCGA TCTTCCTCCTCGTCATCTTTCCGTCTCCGGTTTCGACAGGTGGTGGAATC GGAGGTTAAAGAGGAGTTCGTGAAGCAAATGGCGAACACCTTAGACTGGG GAGCTCTCTGCAAAGCGGCGTCTGAGGTCGGGATGCCCGAAGGGTCTCTG CCCCCTGCGTTGACGCCGGAGTTGCTGGAGGATTCCTCTTTCCTACAGGC GTTGCATCGGGTCTTGATGGACATGCATGTGGTGGAAGGAACCCTCGTCT GTCCAGAGACGGGTCGCAGGTTTCCAATCACGGAGGGCGTGCCGAATCTC ATGTCGGGATGCCCGAAGGGTCTCTGCCCCCTGCGTTGACGCCGGAGTTG CTGGAGGATTCCTCTTTCCTACAGGCGTTGCATCGGGTCTTGATGGACAT GCATGTGGTGGAAGGAACCCTCGTCTGTCCAGAGACGGGTCGCAGGTTTC CAATCACGGAGGGCGTGCCGAATCTCATGTGCACGGAAGACGAGGTTCGA TGAGTGCACGGAAGACGAGGTTCGATGA back to top
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