mRNA_H-canaliculatus_F_contig1022.238.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: D8LJZ7_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ7_ECTSI) HSP 1 Score: 793 bits (2048), Expect = 1.530e-276 Identity = 532/858 (62.00%), Postives = 590/858 (68.76%), Query Frame = 1 Query: 1 MTSPPA--TAAPE----DHERRRP-GHLRLAVVGQGADELGRRLAERYGFMAMSMDELMKGRKGRKTDNVKAKAAAVWLGT---ATGRVLTGFPTTATQADSLVKQGVNLEQLVLVSRTGPLPDADAVDENSEPRDEEEEERLLATRLEGRMIKLAGQEDVDSLCDTAASLLSFSG-------------DSPPHAATARAAGAESLPSXXXXXXXXXXXXXRTPSLLSDADMIMRPAEHAAAHQEAREMDPADPEAAD-RRAQSREGAEAKRARKEAIREKKRKANEAQQLDTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASSGGGEDSERGVGVVGGGGPVASTRLDFGPLALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQRWTPGLCSSAGADG------GRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGGLTSSVELLVDASVFHDLSKVTAPIVVGSAKVLERLIRKSRPSVRDDVLPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSANGEAQVVACSATIGRPLRRELGHIVRRASSMSGVSSVTNTVA------GDSSGSRELRLIRDAASESADRN---LATERARVTAVVAHLRRAGGSVGARAVALHEAMGFVSDEDFGGVRGAHASVAIQQHDQL-AGQFRAAA---------------------VAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFEPLDILNVVNR 2391 MTS P+ TA E DHE RP G LRLA+VG+ ADELG R+AER+G +A SMD LMKGRKGRKTDNVKAKAAA WLGT +TG VLTGFPTTATQA+ L KQGV +EQLVL+ R G P+ +A +E+ E E LL +RLEG+++KL Q+DVDSLCD+AASLL+ SG D+P A A+AA +LP PS L DADM+M P+E A A EA + +P EAAD RRA+SR GA+AKRA K AIR KKR ANEAQQLDTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAAS G GE +TRLDFGPL LDSPASDCLLAAGITEPTGIQ+AGMGPILNGESVILHAMTGSGKTL FLLPLMQRWTPGL S++ A G R +++ GG APWQLLLALPTRELAVQVAREVVLLSGGLT+SVELLVDA+ FHDLSKVTAPIVVGSAKVLER IRKSRP+VR+DVLPR+KCIVVDEVDRLVDVLSKHAP +EAEKRKRH RPIAALLERVL+ANGEAQ A G P RR L + + SG + +T+ GD L + A E R + RVTAVVAHLRRAGG+VGARAVALHEAMGFVSDEDFG VRG H S AI+QHD+L AGQ A E+G VLVTGE SARGLHFDDVDFVFLMQKPKSPDEYVHLAGRT XXXXXXXXXXXXXXXX RKL+GWS SLKV+FEPLDILNV+ R Sbjct: 1 MTSTPSATTAGREVPVQDHEPSRPAGLLRLAIVGENADELGLRIAERHGLVATSMDGLMKGRKGRKTDNVKAKAAAEWLGTCPASTGGVLTGFPTTATQAELLEKQGVGVEQLVLLERAGAAPE-EAANES-----EGGELHLLTSRLEGKVVKLPSQQDVDSLCDSAASLLAASGGQQRSSAALRDVDDAP--APPAKAAETSALP----------------PSTLRDADMMMSPSELAVARAEAADPEPEGVEAADHRRARSRAGAKAKRAEKAAIRRKKRMANEAQQLDTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASPGSGEXXXXXXXXA-----AVNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAAAASAGVNGERASDKAGGGVSHAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDANTFHDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQCRKPRAQ-GHP-RRLLRVVGPKPGHRSGAVVIPDTIRHYCVPLGDGDFFSRLEGLTAAVRELQPRRPLIFVPPQERVTAVVAHLRRAGGAVGARAVALHEAMGFVSDEDFGVVRGRHFSEAIEQHDRLVAGQSLAGGGEGGGREPXXXXXXXXXXXXXADESGVVTGAGGSGSSSGHLLAGGVGPGGMRLRNGDGDAEVGDVLVTGEGSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTGXXXXXXXXXXXXXXXXFRKLQGWSYSLKVNFEPLDILNVLKR 827
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A835ZA34_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA34_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.410e-62 Identity = 200/516 (38.76%), Postives = 254/516 (49.22%), Query Frame = 1 Query: 964 GPVASTRLDFGPLALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQRWTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGGLTSSVELLVDASVFHDLSKVTAPIVVGSAKVLERLIRKSRPSVRDDVLPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSANGEAQVVACSATIGRPLRREL-----------GHIVRRASSMSGVSSVTNTVA---GDSSGSRELRLIRDAA----SESADRNLATER--------ARVTAV----------------------VAHLRRAGGSVGARAVALHEAMGFVS--DEDFGGVRGAHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFE 2361 G A + FG L L ++CL+ AGI+ P+ IQ A M I GESV+LHA TGSGKTLAFLLPLMQR ++ GA+ P Q+++ +PTRELAVQ+ARE VLL GG T V+L +D L+ V APIVVG+AKVL + ++K+RPS R ++L + +V DEVDRLVD LSK+A REA++RKRH RPI LL + + + E QV+A SAT+GRPLRREL G V RA++++ S T+TV D+ G L A + A R +A R A VTAV VA R+ G V AR LHEAMGF S D D D F A A A VLV DSARGLHF+ VD V ++ + + PDEYVHL+GRT XXXXXX + ++GW + LK E Sbjct: 361 GTDADASVAFGELELRGAMAECLVKAGISTPSPIQAASMSRIATGESVMLHAETGSGKTLAFLLPLMQR-----IAATGAN---------------KPLQVMVVVPTRELAVQIAREAVLLGGGATKGVDLFLDQQAGVTLADVKAPIVVGTAKVLAQAVKKTRPSERVELLANLSAVVCDEVDRLVDTLSKYATKREADQRKRHPRPIMPLLTALKTRHPELQVIASSATVGRPLRRELAQALGLEDFKDGPAVVRANAIAPPRSKTSTVTVEEDDADGDVPADLAHSRAVMIPATIAHRYIALYREDFEEKIAAAVTAVRALRPPPRRPLIFIPASESVNRVALRLRSSGLVNARP--LHEAMGFASAVDTDAAXXXXXXXXXXXXTEDDAPSGFAHATQALAA-------------HDALAALYAETEGAGEGEGGVEHAQVLVASADSARGLHFEGVDLVVILGRARGPDEYVHLSGRTGXXXXXXTVVSVVTYKEAKAMKGWEAQLKFRLE 841
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A7S2Y0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0L3_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.890e-43 Identity = 182/591 (30.80%), Postives = 269/591 (45.52%), Query Frame = 1 Query: 802 DTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASSGGGEDSERGVGVVGGGGPVASTRLDFGPLALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQR--WTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGGLTSSVELLVDA---------------SVFHDLSKVTAPIVVGSAKVLERLIRKSRP--SVRDDVLPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSA--NGEA------QVVACSATIGRPLRREL----GHIVRRASSMSGVSSVTNTVAGDSSGS--------RELRLI--------------RDAASESADRNLAT--------------ERARVTAVVAHLRRAGGSVGARAVALHEAMGFVSDEDFGGVRGAHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFEPLDI 2373 + P+Y+ + P+A P +P++PSRI E + + + E E L+FGPL L S + L AGIT P+ IQ M I G + ++HA TGSGKTLA+LLPL+ W+ P QLL+ P RELAVQ+ RE+V+L GG + VEL+++ + H + APIVV +A+ +E ++ S+ + + L ++ +V+DEVDRL+D L K+A +E +R+ H RP + LL + + +GEA Q+VACSAT+GR L REL G + R + G S + GD G + LR + +++ E + L A+++ V+ L G + A ALH+AMGF S + R S A+ D +A F+ + E +LV ED+ARGLHF++VD+VFL+ KPK+PDEY+HLAGRT XXXXXXX +K++ W L V+ E L++ Sbjct: 187 EEPYYMRLKTKTPRAPAAP-LPIIPSRIQE-VDAQSLKAMREQVE---------------PLEFGPLTLRSSMAAALRQAGITTPSPIQANAMTAIRQGSNAVVHAETGSGKTLAYLLPLLMDMDWST-------------------------PRQLLVVAPGRELAVQIGREMVVLLGGRSDLVELVLEGKPKTVQGGNQREKNLASGHPALRTQAPIVVATARQMEIALKTSKKFEEHKTNFLKSIRTVVLDEVDRLIDPLPKYATLKERRQRELHPRPASTLLYNLFLSRISGEAAALPKVQLVACSATVGRQLTRELCRLTGMMPRDLPVLRG-SDADSLSLGDGDGEDPEGGGAEKTLRYVNVPPSIKHFYIPTMKESLEEKMEELLVAITMLKPRAPLLFIPRDAKISGVIEELHSVGLT---EAQALHQAMGFGSGHETSNRRHEGKS-AMLSLDHIASLFQKKSEDER-------------------------------------PPLLVASEDTARGLHFNEVDYVFLLAKPKTPDEYLHLAGRTGXXXXXXXVVTVISFREVKKMKAWKKILGVELEELEL 693
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A7S3A3J3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3J3_9RHOD) HSP 1 Score: 147 bits (372), Expect = 3.050e-34 Identity = 138/487 (28.34%), Postives = 203/487 (41.68%), Query Frame = 1 Query: 985 LDFGPLALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQRWTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGGLTSSVELLVDASVFHDLSKVTAPIVVGSAKVLERLIRKSRPSVRDDVLPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSANGEAQVVACSATIGRPLRRELGHIVR--RASSMSGVSSVTNTVAGDSSGSRE------------LRLIRDAASESADRNLAT--------------ERARVTAVVAHLRRAGGSVGARAVALHEAMGFVSDEDFGGVRGAHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFE 2361 ++FG + +DS S+ L + +P+ IQ+A + + NGE+ +LH+ TGSGKT+A+LLP+++ A L+ +P+REL VQV E L + V L + ++ T ++VG+AK + L K K IV DEVDRL+ + KHA +K+KRH RP +A+LER+ E QV+A SAT+GRPL+REL ++ M+ + + + SSG+ L +I D SE D + A +T V+ LR G A A ALHEA GF +G + ++ ++ +L F +LV E +ARGLH VD VFL+ P +EY+HLAGRT R + W S LKV F+ Sbjct: 60 VEFGGIQIDSAVSEALARRNVRDPSPIQRAALARLSNGETAVLHSETGSGKTIAYLLPIIKNMLESEVKKA----------------------YLIIVPSRELGVQVYSEACALLCDESGRVSYLEELNMPR-----TGTLLVGTAKTVHALSDKFGFK---GFFNMFKVIVFDEVDRLIGTVGKHAARAVKQKKKRHTRPASAILERIARDGMECQVIAASATVGRPLKRELASLLNLPMKDGMAVIRPAQDILPEGSSGNGSRLLIPKNIEHICLPVIIDEYSEMMDALAGALVHLNPKKPLIFINKNASITKVIEELRERGF---AEATALHEAYGFG--------KGVTSLESMDKYGKLMSSFNGG-----------------------------------DSDLDQSAPILVASEAAARGLHLSHVDVVFLIDCPSDQNEYLHLAGRTGRMGEDGKVVSICSYRKARVMNTWQSQLKVTFK 470
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A0G4EJG7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJG7_VITBC) HSP 1 Score: 145 bits (366), Expect = 3.030e-33 Identity = 152/482 (31.54%), Postives = 211/482 (43.78%), Query Frame = 1 Query: 1087 ILNGESVILHAMTGSGKTLAFLLPLMQRWTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGGLTSS-----------VELLVDAS---VFHDLSKVTAPIVVGSAKVLERLIR-KSRPSVRDDVLPRVKC---------IVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSANGE----AQVVACSATIGRPLRRELGHIVR-RASSMSGVSSVTNTVAGDSSGSRELRLIRDAASESADRNLATERARVTAVVAHLRRAGGSVGARAVA----------------------LHEAMGFVSD--EDFGGVRGAHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFEPLDI 2373 IL+GE V+LH+ TGSGKTLAFLLPLM R L + A G R AP + L+ PTRELA+Q+A+E++ L G LT S V L++D + L + + P VVG+A L R +R S S + L RVK +++DEVDRLV L ++A R+ E RK+H RP + + VL + Q++A SATIGRPLRREL +++ R G + + SR + + T A+V +VA LR S +A LHEA+GF S + +R + A+ +H +L G+F+ EA +LV D ARGLHF+ VD VF++ +P++PDEY HLAGRT R L W L +D PL + Sbjct: 4 ILSGEDVLLHSETGSGKTLAFLLPLMVRR---LAQARRARGAARER---------APMETLVIAPTRELAIQLAQEILELEGALTGSRSNDPLQRPDLVHLVIDDENLPLERTLLRTSCPYVVGTATSLLRALRYDSTASSQHHHLARVKPHRLLQNVRHLIMDEVDRLVSPLGRYATLRDKEVRKKHPRPATVIAQAVLETSRHLRQSVQLIAASATIGRPLRRELANMMGVRDVDKGGPLLIRPFEVEEYLHSRAVGVPDTIEHFFLPLTNNTLGAKVNGLVAALRTLKPSRPLIFLAPHHSVRSLTHFLKTQGFQDTMPLHEALGFHSGFKKKTRDLRVKTSQEALAKHQELKGRFKKQDGEEA-----------------VPDAALQERIDNTVVDKNSSPPLLVASMDGARGLHFNQVDMVFVLGRPRTPDEYQHLAGRTGRQGAGGTAVIIGDSFEVRSLLAWRKMLGIDIRPLRV 456
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A1Z5JEC7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC7_FISSO) HSP 1 Score: 121 bits (303), Expect = 8.040e-25 Identity = 141/498 (28.31%), Postives = 207/498 (41.57%), Query Frame = 1 Query: 970 VASTRLDFGPLALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQR-WTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGG-----LTSSVELLVDAS----VFHDLSKV-TAP-IVVGSAKVLERLI----RKSRPSVRD----DVLPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSAN-GEAQVVACSATIGRPLRRELGHIVRRASSMSGVSSVTNTVAGDSSGSRELRLIRDAASESADRNLATERARVTAVVAHLRRAGGSVGARAVALHEAMGFVSDEDFGGVRG-AHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------VLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFEPL 2367 V ++F L L + A D L A +P+ IQ A + ++ GES ILHA TGSGKTLAFLLPL + WT G + A ++ PTRELA Q+A +L+ ++ +L+ D + V D+ ++ T P + +GSAK + + + P R + L V+CIV+DEVDR++ V A E + +K H +P A + V G Q+VA SAT+GRPLRREL ++ + AGD +G DA ++A T VT V + AG S G A ++ + + V+ A + + + + Q A+ G + VLVTGED+ RGLH D +D+V ++ +P PDEY H+AGRT L WS L V+F + Sbjct: 164 VVERLINFAGLKLSTVAGDALGRAKFFKPSPIQAAAIPQLVRGESCILHAETGSGKTLAFLLPLTEYLWTQGQDRDSFA---------------------VVMAPTRELASQIAGIAAVLAPPGTVRFISRPTDLMADGAKERGVPIDVDELGTKPRLFIGSAKTIMHSLYGDGKMPAPPTRKPEAMEFLKNVRCIVMDEVDRMLAVQKSRA---EKQYKKIHEKPAAVVCAAVTRLTLGRVQIVAASATVGRPLRRELARVL----GLPPQECPPVICAGDGTG--------DAGQDAATTRAVTIPDSVTNYV--VPTAGSSPGQVLTAAYQVI-----QSLTAVKSNARILLVLSKGFGMNTQNSIGALKHFGCQPEPQNLLDTLEADGTDHMIELYREVSGADGVGQSRRQDDKSASSGYVLVTGEDTVRGLHLDGLDYVLVLGRPNGPDEYTHIAGRTGRAGTPGKVFSIMSESDSASLVSWSRMLGVEFHTI 618
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A4D9CQ85_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ85_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.730e-23 Identity = 99/264 (37.50%), Postives = 129/264 (48.86%), Query Frame = 1 Query: 1000 LALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQRWTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLL----------SGGLTSSVELLV---DASVFHDLSKVTAPIVVGSAKVL-ERLIRKSRPSVRDDVLPR-------------VKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSANG---------EAQVVACSATIGRPLRREL 1683 L L P S L AGITE T +Q+A I+ G V+LHA TGSGKTLA+LLPL+ P L S P QLL+ PTRELAVQV R V L GG SV LL+ + L +TAP+VVG+AKVL + + R +R R ++ +VVDEVDR + L ++A +E +++ RH +P L+E ++ G Q V SATIGRPLRRE+ Sbjct: 166 LLLPPPLSLSLRRAGITEATPVQEAAFPQIMRGHHVLLHAQTGSGKTLAYLLPLL---LPVLSSPL-------------------PRQLLVVCPTRELAVQVGRVVRDLLQGEGGGRRGEGGGEESVALLIQEGEEGAPPVLPSLTAPVVVGTAKVLWKEMERANRTEAGGRERGRGXXXXXXRAWAKNLRAVVVDEVDRCLSPLGQYATAKEKKQKARHPKPAVLLVEELMRGKGGKEXXXXXXRPQFVGASATIGRPLRREV 407
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A7S3QIU8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIU8_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.760e-21 Identity = 148/497 (29.78%), Postives = 216/497 (43.46%), Query Frame = 1 Query: 991 FGPLALDSPASDCLLAAGITEPTGIQKAGMGPIL--NGESVILHAMTGSGKTLAFLLPLMQR-WTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGG-----LTSSVELLVDASVFHDLS--------------KVTAPIVVGSAK-VLERLIRKSR---PSVRDDV---LPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSAN-GEAQVVACSATIGRPLRRELGHIVR-------RASSMSGVSSVTNTVAGDSSGSRELRLIRDAASESADRNLATERARVTAVVAHLRRAGGSVGARAVALHEAMGFVSDEDFGGVRGAHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFEPLD 2370 F + + + A L AG PT IQ + P+L + ES+ILHA TGSGKTLA+LLP+ +R W ++G G R D+ + L+L PTRELA QVA +LS +T+ LL D+ + S + I+VGS+K +L L S+ P+ + + L +V+DEVDRL ++ + T + K+ H +P A L + G+AQ+VA SAT+GRPLRREL ++ R SG V + S + L+ + +L T A T V+ A G + ++ G + G ++ H +V Q + L GA +LVTGE++ RG+H D +D V ++ +PK PDEY+H+AGR XXXXXXXX L W L + FEP+D Sbjct: 170 FAKMQISTAAGTALARAGFELPTPIQATAL-PLLTRDKESLILHAETGSGKTLAYLLPITERLWREE--ENSGLLGER----------TDSSYALILT-PTRELAAQVAGIATVLSPPNSVRLVTTPTNLLRDSWADKERSEGENGGRFDHNFGGRQGTKIIVGSSKSILLSLFGDSKLHPPTSKPEAKKFLSSTTYLVLDEVDRLFNIKTGRGKTSKFYKK--HDKPAAILTSTIARTTLGQAQIVAASATVGRPLRRELARVLGLTPDECPRVVRPSGT--VDDPTTRPISVPKSLKHYALPCDGTTSGSLLTAAAFATKVLP--TPASGKGRKTLFVITKSCGINLRDAIGALK--HFNVQPQPKELL------------GALSGDGTDQLMNNYRRVSGSVGLGERAANVAFDENEGYLLVTGEETVRGIHLDGLDTVVVVGRPKGPDEYIHIAGRAXXXXXXXXVINVLSYEQSNSLASWEGMLGISFEPVD 632
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A7S1GIE5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIE5_CYCTE) HSP 1 Score: 110 bits (276), Expect = 1.860e-21 Identity = 144/528 (27.27%), Postives = 215/528 (40.72%), Query Frame = 1 Query: 967 PVASTRLDFGPLALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQR-WTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAR-EVVLLSGGLTSSVELLVDASVFHDLSKVTAP---------------IVVGSAKVLERLIR---------KSRPSVRDDVLPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHVRPIAALLERVLSAN-GEAQVVACSATIGRPLRRELGHIV-----------------------------RRASSM-SGVSSVTNTVAGDSSGSRELRLIRDAASESADRNLATERARVTAVVAHLRRAGGSVGARAVALHEAMGFVSDED--FGGVRGAHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFEPLDI 2373 PV F L L + A + L A P+ IQ A + + GES ILHA TGSGKTLA+LLP+ +R W ++ T D ++ PTRELA QVA +VL G + + + + P I+VGSAK + + + S+P + L V+ +V+DEVDR++ + TR E+ + H RP A + V + G+AQ++A SAT+GRPL+REL ++ RRA ++ S V + T+ G+ S S + L + A E +++ T ++ L RA G V + G + + I++H +++G A + E G +LVTGED+ RGLH D +D V + +P PDEY H+AGRT XXXXX L+ W L+ DF +D+ Sbjct: 178 PVLGPVSKFAGLRLSATAGEALGKANFGNPSPIQAAAVPALYRGESAILHAETGSGKTLAYLLPITERLW-----------------QEYTADDYDDRGYCVIVTPTRELAAQVAGIALVLAPPGAVRLISRPANLMKRNPRERGELPNGGFNSENEPRKDPRILVGSAKAIMQSLYGDGVMPAPPTSKPEAKH-FLRNVRWMVLDEVDRVLHIKK----TRMQERYRLHERPAAVVAAAVARLSLGKAQIIAASATVGRPLKRELCRVLGLETEQCPQVIRGGKADEQEMSTEEDPQHRRAVTIPSTVQNYVTTMDGEGSSSSGMLLTK--ACEVI--KTLSQKKPSTKILLVLTRASGLKTQNTVGALKFFGCKPEPQSLLDALEADGTDRMIEKHRRVSG---ATGIGETG------------------------YFTHKQDDEPSAGYLLVTGEDTVRGLHLDGLDVVVAVGRPHGPDEYTHIAGRTGRXXXXXRVFTVVSKDNAAALKSWERILETDFNIVDV 652
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Match: A0A7S1EPT1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPT1_9RHOD) HSP 1 Score: 105 bits (263), Expect = 5.340e-20 Identity = 143/521 (27.45%), Postives = 217/521 (41.65%), Query Frame = 1 Query: 991 FGPLALDSPASDCLLAAGITEPTGIQKAGMGPILNGESVILHAMTGSGKTLAFLLPLMQRWTPGLCSSAGADGGRRGAEQGTGGAVDAPWQLLLALPTRELAVQVAREVVLLSGGLTSSVELLVDASVFHDLSK------VTAPIVVGSAKVLERLIRK------SRPSVRDDVLPRVKCIVVDEVDRLVDVLSKHAPTREAEKRKRHV--RPIAALLERVL------SANGEA-----QVVACSATIGRPLRRELGHIVR---------------RASSMSGVSSVTNTVAGDSSGSRELRL-----IRDAASESADRNLATERARVT---AVVAHLRRAGGSVGA-------RAVALHEAMGFVSDE-DFGGVRGAHASVAIQQHDQLAGQFRAAAVAEAGAXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGEDSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTXXXXXXXXXXXXXXXXXXRKLRGWSSSLKVDFEPLDILNVV 2385 FG L + L GI T IQ+ M + GES++++A TGSGKTLAF LPL+ L D +Q W L+ P+RELA+Q + + L L E + SV ++SK V P V SA ++ R S + R+D+L +V+C+V+DE DR++ SK+A +RE KRH+ +P +L+ + S G++ QVVA SAT+GRP RR L +++ +A++ G + VT +V S G R + L + D SA + A A+V ++A + ++ A AV +HEA GF+S V G + I+ + AG V VLVT + RGLHFD + +VFL+ S +EY H AGRT ++LR ++LK+ + I +++ Sbjct: 107 FGGLEIPDWIQSSLHEMGIESATDIQERCMESLFRGESLLINAETGSGKTLAFTLPLVLD----LLRQLRLDSSNESNDQEQ---TSRHWYGLILAPSRELALQTWKTLETL---LKFDKESRIRVSVLFEVSKSDSNERVELPADVASAHIVVATPRALFEQMDSSSTARNDLLTQVRCVVLDEADRMISAASKYARSREQMHAKRHLATKPAVQILDYLTDMDIRSSVFGDSRDQGLQVVAVSATMGRPFRRLLANVMHIQDMKLAPTFVRSETKATADIGDAIVTKSVTIPS-GIRHIYLPVEDELPDFNQRSAVLHAAMMHAKVQNALVIIAENQSTASAIEALKSLGWKSAVPVHEAFGFLSGSFSRDAVLGKASQNKIENGSTTGSE-------TAGLNAYPANVP-----------------------------VLVTSFGALRGLHFDGLQWVFLLGGAPSMEEYQHAAGRTGRCGTEGTIVSLVSWSEAKQLRSTQTALKIQLQKWRIEDIL 580 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1022.238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1022.238.1 >prot_H-canaliculatus_F_contig1022.238.1 ID=prot_H-canaliculatus_F_contig1022.238.1|Name=mRNA_H-canaliculatus_F_contig1022.238.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=798bp MTSPPATAAPEDHERRRPGHLRLAVVGQGADELGRRLAERYGFMAMSMDEback to top mRNA from alignment at H-canaliculatus_F_contig1022:12855..17079- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1022.238.1 ID=mRNA_H-canaliculatus_F_contig1022.238.1|Name=mRNA_H-canaliculatus_F_contig1022.238.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4225bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1022:12855..17079- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1022:12855..17079- >mRNA_H-canaliculatus_F_contig1022.238.1 ID=mRNA_H-canaliculatus_F_contig1022.238.1|Name=mRNA_H-canaliculatus_F_contig1022.238.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4788bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1022:12855..17079- (Hapterophycus canaliculatus Oshoro5f female)back to top |