mRNA_H-canaliculatus_F_contig10211.231.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: D8LJ32_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ32_ECTSI) HSP 1 Score: 249 bits (635), Expect = 6.890e-76 Identity = 132/199 (66.33%), Postives = 144/199 (72.36%), Query Frame = 1 Query: 1 YELPEQHEPLIVLIPENGVPVKDSLKLGSSSSSGSSSLAAEIKSRRAEGCTATLVFDQALLKTARERGLLFEPGEAGASVGDKPGGDRAGVPPSPA--TTLFTPSPFLTRAAAVIEPHLRHAWLPLTCIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRVEVVRGKVKHTGEIHLSTESETVQD 591
YELPEQHEPL+VL+PE G P G LA EI RRAEG TATLVFDQ +L TARE GLLFE GE G + A P S + +TLFTPSPFLTRAAAVIEPHLRH WLPLTCID+GCGAGRDAVWLAKRGW V AMDCW QAL+KA QLA RNGVS+ VEV+RGKVKHTGEIH+S +E D
Sbjct: 14 YELPEQHEPLVVLLPEEGAPWNRLTNEG---------LAEEITGRRAEGATATLVFDQKMLTTARESGLLFEEGEEGGESWSEKAAVLASRPSSQSAPSTLFTPSPFLTRAAAVIEPHLRHGWLPLTCIDIGCGAGRDAVWLAKRGWRVTAMDCWNQALQKAAQLARRNGVSESVEVLRGKVKHTGEIHVSVRAEEAHD 203
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A6H5JC12_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC12_9PHAE) HSP 1 Score: 252 bits (643), Expect = 2.400e-75 Identity = 133/201 (66.17%), Postives = 148/201 (73.63%), Query Frame = 1 Query: 1 YELPEQHEPLIVLIPENGVPVKDSLKLGSSSSSGSSSLAAEIKSRRAEGCTATLVFDQALLKTARERGLLFEPGEAGASVGDKPGGDRAGVPPSPA----TTLFTPSPFLTRAAAVIEPHLRHAWLPLTCIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRVEVVRGKVKHTGEIHLSTESETVQD 591
YELPEQHEPL+VL+PE G P S +LA EI RRAEG TATLVFDQ +L TARE GLL E GE G + GG A + P+ +TLFTPSPFLTRA AVIEPHLRHAWLPLTCID+GCGAGRDAVWLAKRGW V AMDCW QAL+KA QLA RNGVS+RVEV+RGKVKHTGEIH+S +E +D
Sbjct: 91 YELPEQHEPLVVLLPEEGAPWNALT---------SEALAEEITGRRAEGATATLVFDQEMLTTARESGLLLEEGEEGRESWSEKGGTAAVLASRPSQSAPSTLFTPSPFLTRAVAVIEPHLRHAWLPLTCIDIGCGAGRDAVWLAKRGWRVTAMDCWNQALQKAAQLARRNGVSERVEVLRGKVKHTGEIHVSVRAEEARD 282
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: W7TC05_9STRA (Methyltransferase type 11 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC05_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.580e-10 Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 271 VPPSPATTLFTPSPFLTRAAAVIEPHLRHAWLP------LTCIDVGCGAGRDAVWLAKRG--WTVLAMDCWKQALRKAVQLAYRNGVSDRVE----VVRGKVKHTGEIHLSTES 576
+ P ++TP+PFL +E L L TC DVGCGAGRD+VWLAKRG W V +D + L + +LA R+GVS+ +E +VRG H+ S E+
Sbjct: 161 ISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFET 274
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A5C4U7B8_9CORY (Class I SAM-dependent methyltransferase n=2 Tax=Corynebacterium tapiri TaxID=1448266 RepID=A0A5C4U7B8_9CORY) HSP 1 Score: 67.8 bits (164), Expect = 2.570e-10 Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 361 WLPLTCIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRVEVVRGKVKHTGE 555
++P + IDVGCG G D+VWLA+RGW VLA+D A+R+A +LA + GV R+E ++ GE
Sbjct: 42 FIPGSAIDVGCGEGADSVWLAERGWKVLAIDPAPTAIRRARELAVQRGVDKRIEFCEATIQGVGE 106
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A3A4B5C0_9ACTN (Class I SAM-dependent methyltransferase n=1 Tax=Bailinhaonella thermotolerans TaxID=1070861 RepID=A0A3A4B5C0_9ACTN) HSP 1 Score: 64.7 bits (156), Expect = 4.730e-9 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 1 Query: 307 SPFLTRAAAVIEPHLRHAWLPLTCIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRVE 522
+P L R AA + P T +D+GCG G DA+WLA+RGW V A D + ALR+A A GV DR+E
Sbjct: 30 NPLLVREAASLTPG--------TALDLGCGEGADAIWLARRGWRVTATDVSRTALRRAAAHAAEAGVGDRIE 93
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A077WHY2_9FUNG (Uncharacterized protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WHY2_9FUNG) HSP 1 Score: 65.5 bits (158), Expect = 6.910e-9 Identity = 40/94 (42.55%), Postives = 50/94 (53.19%), Query Frame = 1 Query: 277 PSPATTLFTPSPFLTRAAAVIEPHLRHAWLPLTCIDVGCGAGRDAVWL-AKRGWTVLAMDCWKQALRKAVQLAYRNGVSDR-VEVVRGKVKHTG 552
PS LF P PFL R +IE L TC+D+GCG+GRD WL A RGW V A+D A+ + LA GV D V+ ++ KV G
Sbjct: 104 PSQRWLLFRPCPFLERHIDLIESRLTDH---KTCLDIGCGSGRDVAWLMASRGWHVYALDSSNGAVERTQALAEHMGVKDHLVKTMQAKVMADG 194
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A6G9YQ00_9NOCA (Methyltransferase domain-containing protein n=3 Tax=Nocardia TaxID=1817 RepID=A0A6G9YQ00_9NOCA) HSP 1 Score: 64.3 bits (155), Expect = 8.860e-9 Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 301 TPSPFLTRAAAVIEPHLRHAWLPLTCIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRVEVVRGKVKHT 549
+P+P L R + +P +D+GCG G DAVWLA RGW V A+D AL +A +LA R+GV++R++ R + T
Sbjct: 49 SPNPLLVREVTGL--------IPGAALDLGCGEGADAVWLASRGWRVTAVDVSATALGRAAELAVRDGVAERIDWQRHDLAET 123
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A6T5VZ29_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6T5VZ29_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 1.050e-8 Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 295 LFTPSPFLTRAAAVIEPH-LRHAWLP----LTCIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRV 519
L++PSP L +E L AW TC+D+G GAGRDAVW A RGW V+A+D K+ L + LA ++GV DRV
Sbjct: 148 LWSPSPELATWLPRVERETLGDAWTTSSSRATCVDLGSGAGRDAVWAASRGWRVVAIDNDKKGLARCEALAEQHGVLDRV 227
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A1N7F7X2_9NOCA (Methyltransferase domain-containing protein n=2 Tax=Williamsia sterculiae TaxID=1344003 RepID=A0A1N7F7X2_9NOCA) HSP 1 Score: 63.9 bits (154), Expect = 1.190e-8 Identity = 34/80 (42.50%), Postives = 41/80 (51.25%), Query Frame = 1 Query: 292 TLFTPSPFLTRAAAVIEPHLRHAWLPLTCIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRVEVVR 531
T P+P LT PH P T +D+GCG G DAVW+A +GW V A+D AL + A R GV DRV R
Sbjct: 48 TGLRPNPVLTDVMGTTAPH------PSTALDLGCGHGGDAVWMASQGWEVTAVDVSATALSRVTAAAERAGVGDRVHTRR 121
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Match: A0A2X4TNB4_9NOCA (Oxidoreductase n=1 Tax=Rhodococcus coprophilus TaxID=38310 RepID=A0A2X4TNB4_9NOCA) HSP 1 Score: 65.1 bits (157), Expect = 1.420e-8 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 1 Query: 337 IEPHLRHAWLPLT---CIDVGCGAGRDAVWLAKRGWTVLAMDCWKQALRKAVQLAYRNGVSDRVEVVRGKVK 543
+ P L PLT +DVGCG G DA+WLA RGW+V AMD + AL K A +GV DRV ++ V+
Sbjct: 340 VNPQLEAEAAPLTPGRALDVGCGEGADAIWLAGRGWSVTAMDFARAALEKTAAHAAESGVGDRVTTLQADVR 411 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10211.231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10211.231.1 >prot_H-canaliculatus_F_contig10211.231.1 ID=prot_H-canaliculatus_F_contig10211.231.1|Name=mRNA_H-canaliculatus_F_contig10211.231.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=234bp YELPEQHEPLIVLIPENGVPVKDSLKLGSSSSSGSSSLAAEIKSRRAEGCback to top mRNA from alignment at H-canaliculatus_F_contig10211:1478..4809- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10211.231.1 ID=mRNA_H-canaliculatus_F_contig10211.231.1|Name=mRNA_H-canaliculatus_F_contig10211.231.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3332bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10211:1478..4809- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10211:1478..4809- >mRNA_H-canaliculatus_F_contig10211.231.1 ID=mRNA_H-canaliculatus_F_contig10211.231.1|Name=mRNA_H-canaliculatus_F_contig10211.231.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1404bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10211:1478..4809- (Hapterophycus canaliculatus Oshoro5f female)back to top |