mRNA_H-canaliculatus_F_contig1021.228.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: D8LJA7_ECTSI (PITH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA7_ECTSI) HSP 1 Score: 387 bits (994), Expect = 1.750e-134 Identity = 213/235 (90.64%), Postives = 218/235 (92.77%), Query Frame = 1 Query: 1 MASCRHDHEEAGXXXXXXXXXXXXXXXXXXXX-DPEDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHKAPSGETGGRNIL 702 M+SCRHDHEEAGXXXXXXXXXXXXXXXXXXXX DPEDPDGMSLFGLIDTTRVRCLNES PG GLNCLKPWDKRRDPQPRLESEEDDPELII+VPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLP VQTLEMVRDSGG+EVDYP K++KMQNVSDITLFVPSNFGADSTVITYLGFKGESTK FRHGVVECVYEAKP EDHKAPSGETGGRNIL Sbjct: 1 MSSCRHDHEEAGXXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESAPGSGLNCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTK----------FRHGVVECVYEAKPNAEDHKAPSGETGGRNIL 225
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: A0A835ZD87_9STRA (Galactose-binding domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD87_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.080e-87 Identity = 144/234 (61.54%), Postives = 175/234 (74.79%), Query Frame = 1 Query: 1 MASCRHDHEEAGXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHKAPSGETGGRNIL 702 M++CR +HE G XXXXXXXXXXX D EDP G SL+GLIDTTRVRCLNES G L CLKPWDKRR+P+P LES + DPEL+I VPFT+VVKI+AIS+ GG +G+APS MKV+VNRDDIDF A+D+PGVQ++E+V DSGG+EVDYP K+ K QNVS +TLF N GAD+TV+++LGF+GEST FRHGVVE VYE+KPM DHK GE +++ Sbjct: 1 MSACRGEHEGCGGGHDHSXXXXXXXXXXX---DIEDPTGQSLYGLIDTTRVRCLNESAVGQVLQCLKPWDKRREPEPFLESNDGDPELLIHVPFTEVVKIKAISLLGGRDGAAPSKMKVWVNRDDIDFTSAEDVPGVQSMELVADSGGVEVDYPTKLHKFQNVSSVTLFFGDNHGADTTVLSFLGFRGESTN----------FRHGVVEAVYESKPMATDHKQLGGEFTNNSVV 221
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: W7UAE5_9STRA (PITH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAE5_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.650e-65 Identity = 105/203 (51.72%), Postives = 141/203 (69.46%), Query Frame = 1 Query: 97 DPEDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGG--GEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVR------DSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHKAPSGE 681 + EDPDG S+F IDT++VRCLNE+ G L+ K ++KRR+P+PRL+S +DDPEL++FVPFT++VK+++I++ GG GEG+AP+ +K+FVNRDDIDFG +L Q LE+V D GGI DYP K++K QNVS +T+F N G D T ++Y+GFKGE T RHGVVECVYE+ P DHK +GE Sbjct: 26 EAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGI--DYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSV----------RHGVVECVYESAPQAADHKQDAGE 216
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: A0A7S2WKA7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WKA7_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.060e-60 Identity = 99/202 (49.01%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 100 PEDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHKAPSGET-GGRNIL 702 P+DPDG SLF IDT +V CLNE G G NC+K ++ D + SEEDDPELI+ +PFT VK+++ + GG G APS +K+F NR+D+DF AQ++PGVQT E+ D G E+DYP + +K QN+S +T++V NFGADST IT+LG KGE T A R GVVEC YEA +DH+ + GR+ L Sbjct: 42 PDDPDGNSLFAYIDTEKVSCLNEREQGSGKNCIKSNVEKHDDTRFVISEEDDPELILHIPFTVAVKLKSFCIIGGANGEAPSKVKLFTNREDLDFEDAQEMPGVQTFELTEDFEG-EIDYPVRASKFQNISSLTIYVSENFGADSTKITFLGLKGEGTTA----------RRGVVECTYEASAQLKDHQTTRADNVAGRSEL 232
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: A0A2D4BK70_PYTIN (PITH domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK70_PYTIN) HSP 1 Score: 192 bits (488), Expect = 1.010e-57 Identity = 114/219 (52.05%), Postives = 148/219 (67.58%), Query Frame = 1 Query: 10 CRHDHEEAGXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHK 666 C+ +H+E G XXXXXXXXXXXXXXXXX +PEDP G SLF IDT+++R LN + P + KPW +R D L S EDDPELIIF+PFT+ V I++I + GG +G+ P ++K+F+NR+DIDF A +LP Q LE+V D G E+DYP ++ K Q VS +T+FV + G D T I Y+G KGES K +RHGVVE VYE++P DHK Sbjct: 3 CQREHDECGGHXXXXXXXXXXXXXXXXX-EPEDPSGDSLFPYIDTSKLRALNAAEPDHVAHPFKPWHERSDRSRYLSSNEDDPELIIFIPFTEAVSIKSICIAGGEDGAHPKSVKLFINREDIDFSNASELPAQQRLELVEDLAG-EIDYPLQVRKFQGVSSLTIFVEDSTGGDDTKIYYIGLKGESKK----------WRHGVVEAVYESRPQAADHK 209
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: K3WYX1_GLOUD (PITH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYX1_GLOUD) HSP 1 Score: 183 bits (464), Expect = 4.210e-54 Identity = 95/200 (47.50%), Postives = 122/200 (61.00%), Query Frame = 1 Query: 103 EDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHKAPSGETGGRNIL 702 ED +G SLF IDT+++R LN P + K + R D L S EDDPE+IIF+PFT+ V I++I ++GG +GS P +K+F NRDDIDF A +LP Q LE++ D VDYP +I K Q VS +TLFV N+G D + I Y+G KGES K +RHGVVE VYE++P DHKA GG N L Sbjct: 31 EDAEGDSLFPFIDTSKLRVLNAEDPARVAHPFKAFHDRHDRTRFLSSNEDDPEIIIFIPFTEAVSIKSICISGGEDGSHPKVVKMFTNRDDIDFTNANELPAQQKLELIEDLTAT-VDYPLQIRKFQGVSSLTLFVQDNYGGDDSRIYYIGLKGESKK----------WRHGVVEAVYESRPQAADHKAKGETLGGSNTL 219
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: A0A2P6TTM9_CHLSO (PITH domain-containing 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TTM9_CHLSO) HSP 1 Score: 182 bits (462), Expect = 6.600e-54 Identity = 91/198 (45.96%), Postives = 127/198 (64.14%), Query Frame = 1 Query: 121 SLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRD-----PQPRLESEEDDPELIIFVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHKAPSGETGGRNI 699 SL+ IDT VRCLNE+V G KPW R++ P +L+SEEDDPEL++ VPF+ VK+ I+V GG +G++P+ +KVF+NRDD+DF A DLP VQ +++ + GG +++YP K V + L+ PSN+GAD T I+++G +GE SE +RE VE VYEAKPMP+DHK P + G N+ Sbjct: 24 SLYKHIDTQHVRCLNEAVEGSCRKVFKPWHLRQEAPSGEPGAQLDSEEDDPELLLHVPFSGSVKLTGITVVGGPDGASPAKLKVFINRDDLDFSAAADLPAVQEWDLLENYGG-QIEYPTHAAKFNGVHSLDLYFPSNYGADRTTISFIGLRGEF---SERRRE-------AVEAVYEAKPMPQDHKVPERQGAGWNL 210
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: G4YY60_PHYSP (PITH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YY60_PHYSP) HSP 1 Score: 182 bits (461), Expect = 1.160e-53 Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 1 Query: 103 EDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGG-GEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHK 666 ED +G SL+ IDT++VR LN P N KP+ +R+D L S EDDPE+I+F+PFT+ V I++I ++G G+G P A+K+F NRDDIDF A +LP Q L+++ D +DYP ++ K Q VS +TLF ++G D T I Y+G KGES K +RHGVVECVYEA+P P DHK Sbjct: 31 EDANGDSLYPFIDTSKVRVLNALDPEAASNPFKPFHERQDHSRFLISNEDDPEMILFIPFTEAVSIKSICISGSAGDGEHPKAVKLFTNRDDIDFSNANELPPQQRLDLIEDESA-NIDYPLQVRKFQGVSSVTLFFEDSYGGDETKIYYIGLKGESKK----------WRHGVVECVYEARPQPSDHK 208
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: H3GLD6_PHYRM (PITH domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3GLD6_PHYRM) HSP 1 Score: 177 bits (450), Expect = 5.100e-52 Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 1 Query: 103 EDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGG-GEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHK 666 ED +G SL+ IDT+++R LN P N KP+ +R+D L S +DDPE+I+F+PFT+ V I++I ++G G+G+ P A+K+F NR+DIDF A +LP Q L++V D +DYP ++ K Q VS +TLF+ ++G D I Y+G KGES K +RHG+VECVYEA+P P DHK Sbjct: 30 EDANGDSLYPFIDTSKLRVLNALDPQDAANPFKPFHERQDRSRFLASNDDDPEMILFIPFTEAVSIKSICISGSTGDGTHPKAVKMFTNREDIDFSNANELPAQQKLDLVEDDTA-NIDYPLQVRKFQGVSSLTLFIEDSYGGDEMKIYYIGLKGESKK----------WRHGIVECVYEARPQPADHK 207
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Match: A0A5D6Y0C3_9STRA (PITH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0C3_9STRA) HSP 1 Score: 177 bits (449), Expect = 6.390e-52 Identity = 90/188 (47.87%), Postives = 119/188 (63.30%), Query Frame = 1 Query: 103 EDPDGMSLFGLIDTTRVRCLNESVPGGGLNCLKPWDKRRDPQPRLESEEDDPELIIFVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPGVQTLEMVRDSGGIEVDYPAKITKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKASENKRERREFRHGVVECVYEAKPMPEDHK 666 ED DG SLF IDT+++R LN P + K + RRD L S + DPELI+++PFT+ V I++I V+GG +G+ P +K+F NRDDIDF A +LP +Q LE++ D +VDYP +I K Q VS +TLFV NFG D + I Y+G KGES K +RHGVVE VYE++P DHK Sbjct: 27 EDADGDSLFPFIDTSKLRVLNAEDPSHAAHPFKSFHDRRDRTRFLRSNDGDPELILYIPFTEAVSIKSICVSGGEDGAHPKEIKLFANRDDIDFSNAGELPALQKLELLEDFSA-DVDYPLQIRKFQGVSSLTLFVQDNFGGDDSQIYYIGLKGESKK----------WRHGVVEAVYESRPQAADHK 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1021.228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1021.228.1 >prot_H-canaliculatus_F_contig1021.228.1 ID=prot_H-canaliculatus_F_contig1021.228.1|Name=mRNA_H-canaliculatus_F_contig1021.228.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=235bp MASCRHDHEEAGGGGGGDGHDHSHGHSHDHSHDPEDPDGMSLFGLIDTTRback to top mRNA from alignment at H-canaliculatus_F_contig1021:21268..24676+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1021.228.1 ID=mRNA_H-canaliculatus_F_contig1021.228.1|Name=mRNA_H-canaliculatus_F_contig1021.228.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3409bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1021:21268..24676+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1021:21268..24676+ >mRNA_H-canaliculatus_F_contig1021.228.1 ID=mRNA_H-canaliculatus_F_contig1021.228.1|Name=mRNA_H-canaliculatus_F_contig1021.228.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1410bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1021:21268..24676+ (Hapterophycus canaliculatus Oshoro5f female)back to top |