mRNA_H-canaliculatus_F_contig1020.220.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: A0A6H5JJT0_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT0_9PHAE) HSP 1 Score: 541 bits (1394), Expect = 1.690e-177 Identity = 373/714 (52.24%), Postives = 438/714 (61.34%), Query Frame = 3 Query: 75 RLYHMSPRSATVWCALLVNAST-RRLVLASTAATRRVQPAAFISTSSSISRPCKTTTIDSTSSIGSRHRTISGVAIDDERRPAVRELLMGCSSPSYPWCGSEPCRSTLVQHQPQPHQRSGAQARRQLYRGFHVRRAN-TSGSRPATMST-SAAGAGRGGEAPLLTPSTGGDGV---------SDCAGSEKNSMRVTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQS---VGSGASGV-SVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDG-----DEGSE------EAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQ---VEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPSVLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDG---GNTRRNELVFIGLGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAWE 2117 RL MSP SA VW ALLVNAS RR VLAST TRR+QPAAFI T ++ TT+ SI S+ G RR RE+ MG SP W S R+T SG Q + ++ H R + SR AT T SAAGA R E+ + P+ GDGV SD + + M+VTLLSGFLGAGKTTLM NV+RQARE++LSLAVIVNDMAD+N+DAQ+L G+G + G +A +SGV SVAMQDGCICCTL+D+L+L V A+A+ GK+ HLIIESTGISDP PVAEALV SD S G+ F +D GS E+E G E G++SLDTLVTVVDSTSFL+E+RKADDLEERGLE+ EGDTRT+ADLL+SQ VEFANV+LLNK+DLAT D+A LE LVRRLNP AR+ RTVSS VGL EVLGTG FDL+EA++AAGW++ L+D+ D DH P +G++SFTFR+RRPFHPERLMGFVM H+PSVLRSKGFLWLATR D++GVWNQAGGSFATE GG WD E AA + V DDG G+ RRNELVFIGLGMDE LR EL+RCLLSEEEMA G + W R FSDPFP WE Sbjct: 2 RLRDMSPGSAAVWYALLVNASMMRRSVLAST--TRRLQPAAFIGTIAT------TTSRTGRGSIASQGPARGG------RRATTREVFMGFRSP---WFSSS--RATAS---------SGVQRLQPWWQRHHHRLNEIATKSRFATTPTASAAGAER--ESGIPRPTAAGDGVVVEGGNGGSSDKSATPAAVMKVTLLSGFLGAGKTTLMSNVLRQAREEQLSLAVIVNDMADINVDAQILTLGNGLDQGGIAAAGASGSXXXXXXSSGVTSVAMQDGCICCTLKDELLLEVGAMAKEGKYDHLIIESTGISDPAPVAEALVESDCSTNDIGYFFNGEDXXXXXXXSTGSAAPLERGESEAVGEGGGEGGMYSLDTLVTVVDSTSFLEEVRKADDLEERGLESGEGDTRTVADLLMSQANTVEFANVILLNKSDLATEEDMAALEGLVRRLNPTARVERTVSSAVGLTEVLGTGEFDLEEASKAAGWLRGLSDD----------------------------------------------------DEDH-------PHSHYGIESFTFRSRRPFHPERLMGFVMEHLPSVLRSKGFLWLATREDSLGVWNQAGGSFATEYGGLWDDFHDADEQXXXXXXXXXXEHGAATAATVDDDGVEGGSARRNELVFIGLGMDEKVLRGELQRCLLSEEEMALGSQEWERRFSDPFPPWE 626
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: D7G7B4_ECTSI (Cobalamin synthesis protein, P47K n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B4_ECTSI) HSP 1 Score: 376 bits (966), Expect = 2.090e-116 Identity = 263/498 (52.81%), Postives = 311/498 (62.45%), Query Frame = 3 Query: 75 RLYHMSPRSATVWCALLVNAST-RRLVLASTAATRRVQPAAFISTSSSISRPCKTTTIDSTSSIGSRHRTISGVAIDDERRPAVRELLMGCSSPSYPWCGSEPCRSTLVQHQPQPHQRSGAQARRQLYRGFHVRRANTSGSR------PATMSTSAAGAGRGGEAPLLTPSTGG--------DGVSDCAGSEKNSMRVTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQS---VGSGASGV-SVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSE----------------EAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALND 1463 RL MSP SATVW A LVNAS RR VLAST T R+QPAAFI T I +T+S R S RR RE+ MG SP W S RST SG Q + ++ H R N ++ P GA R PL T + GG G SD + + +M+VTLLSGFLGAGKTTLM NV+RQARE++LSLAVIVNDMAD+N+DAQLL G+G + G++A G +SGV SVAMQDGCICCTL+D+L+L V A+A+ GK+ HLIIESTGISDP PVAEALV SD S G+ F DG+ E+E E G++SLDTLVTVVDSTSFLDE+RKADDLEERGLE+ EGDTRTIADLL+SQVEFANV+LLNK+DLAT D+A LE LVRRLNP AR+ RTVSS VGLAEVLGTG FDL+EA++AAGW++ N+ Sbjct: 2 RLRDMSPGSATVWYAFLVNASMMRRSVLAST--TGRLQPAAFIGT------------IVTTTSRAGRGSLASDGPASGGRRATTREVFMGFRSP---WFSSS--RST---------DSSGVQRLQPWWQRHHHRHRNEFATKSRFAATPXXXXXXXTGAERESGIPLPTAAGGGAVVKGDSGSGRSDKSATPAAAMKVTLLSGFLGAGKTTLMSNVLRQAREEKLSLAVIVNDMADINVDAQLLTLGNGLDQGDLAAAGASGSAVAGESSSGVTSVAMQDGCICCTLKDELLLEVGAMAKEGKYDHLIIESTGISDPAPVAEALVESDCSTNDTGYFF----DGEXXXXXXXXXXXXXXAPLERGESEAVGGGXGEGGMYSLDTLVTVVDSTSFLDEVRKADDLEERGLESGEGDTRTIADLLMSQVEFANVILLNKSDLATEEDMAALEGLVRRLNPTARVERTVSSAVGLAEVLGTGEFDLEEASKAAGWLRLANE 467
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: A0A7S3Y427_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y427_HETAK) HSP 1 Score: 327 bits (837), Expect = 3.720e-98 Identity = 208/500 (41.60%), Postives = 279/500 (55.80%), Query Frame = 3 Query: 621 VTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALV--ISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPSVLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIGLGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAW 2114 VT+LSGFLG+GKTTL++N++ ++ + +AVIVNDMA++NID++L+ VD+ A V M++GC+CCTLR+DL+ V ++A K+ +L+IESTGIS+P PVAE + DG+ E + +LDT+VTVVD+ F ELR AD+L RGL A EGD RT+ADLLV+QVEFA+V+LLNK DL A D+ +E +++RLNP ARI++T++S+VGL +V+GTGAFD D+A QA GW+Q LN G+H T E +G+ SF FRARRPFHPERLM FV+ M +V+RSKGF WLATR+D +GVW+QAGGS+ GG+W + + E +D A A V + RR ELVFIG+GMD LR L LL+++EMA GP W D FP W Sbjct: 36 VTVLSGFLGSGKTTLLQNIL--TNKEGMKVAVIVNDMAEINIDSKLIKN---------LGVDITV----APEKMVEMENGCVCCTLREDLLKEVASLAGENKYDYLVIESTGISEPMPVAETFTFRLEDGTAL----------------------------EDVATLDTMVTVVDAAGFPRELRAADELGARGLAAGEGDGRTVADLLVAQVEFADVILLNKIDLVEANDVVLVENMIKRLNPDARIIQTINSKVGLQQVVGTGAFDFDKAAQAPGWLQELN-------------------------------------------------------GEHVPET-----EEYGISSFIFRARRPFHPERLMDFVVSDMSTVIRSKGFCWLATRNDQMGVWSQAGGSYTQGPGGAW-----WAATPAAEWPEDPEEA--ACVREDFEGPYGDRRQELVFIGMGMDASQLRGRLTNALLTDKEMAAGPASWAA-LEDSFPEW 424
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: UPI001B04A2DE (GTP-binding protein n=1 Tax=Solirubrobacteraceae bacterium TaxID=2586742 RepID=UPI001B04A2DE) HSP 1 Score: 297 bits (760), Expect = 1.850e-87 Identity = 208/499 (41.68%), Postives = 254/499 (50.90%), Query Frame = 3 Query: 621 VTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEG-LFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPSVLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIGLGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAW 2114 VT+LSGFLGAGKTTL+ +V+R + L +AVIVNDM++VN+DA L+A GD AR+D V M +GCICCTLR+DL++ V +A G+ L+IES+GIS+P PVAE D DG G + LDT+VTVVD+++FL E DDL +RGL D RTI DLLV QVEFA+ +++NKADLA A + EAL+R LNP AR++R+V EV L EVLGTG FD D A QA GW+ L EE E E +GV SF FRA RPFHP RL + V RSKGF WLATRHD W+ AG + G+W G E AQ D A P G D RR ELVFIG GMDE A+R L CLL E+E+A GPE WR +DPFP+W Sbjct: 7 VTVLSGFLGAGKTTLLEHVLRN--REGLRVAVIVNDMSEVNVDAALVAGGD-------ARIDH------VEEQLVEMSNGCICCTLREDLLVEVRRLAGEGRFDALLIESSGISEPLPVAETFTFED---------------------------EDGVTLGDVARLDTMVTVVDASTFLAECDGLDDLTDRGLGLGPDDARTIVDLLVDQVEFADTIVVNKADLADAPTLQRTEALIRALNPGARVVRSVRGEVPLGEVLGTGRFDPDAAAQAPGWLSVLRGEEVPE------------------------------------------------------------TEEYGVRSFVFRADRPFHPTRLHAAMTAGFAGVRRSKGFAWLATRHDLAAEWSLAGRVMSIGPAGTWWAAVGEAERAAWFAQMDPADVPDLG-GRFGD-----RRQELVFIGDGMDEPAIRRHLEACLLREDELATGPEAWRA-LADPFPSW 396
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: A0A084SIL2_9DELT (CobW C-terminal domain-containing protein n=2 Tax=Archangium TaxID=47 RepID=A0A084SIL2_9DELT) HSP 1 Score: 296 bits (759), Expect = 2.650e-87 Identity = 200/498 (40.16%), Postives = 266/498 (53.41%), Query Frame = 3 Query: 621 VTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPSVLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIGLGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAW 2114 VT+LSGFLGAGKTTL+ +V+ +R+ AVIVNDM++VNIDA+L+ G ++RVD + V M +GCICCTLR+DL++ V +AR G+ HL+IESTGIS+P PVAE +D ++G A+ A+ LDTLVTVVD+ +FL + +L ERGL A + D RT+ DLLV QVEFA+V++LNK DL + + LE+++R+LNP AR++R+ +V L+EVL TG FD+++A +A GW+Q L E E E +G+ SF FRARRPFHP RL F+ G +LRSKGF WLATR D GVW QAGG+ A E G W EE ++ ++RA + + RR ELVFI +D+ LRA L CLL+ EEMA GP GW + DPFP W Sbjct: 8 VTVLSGFLGAGKTTLLNHVLNNREGRRV--AVIVNDMSEVNIDARLVKGG-----ASLSRVDEKLV---------EMSNGCICCTLREDLLVEVGRLAREGRFDHLLIESTGISEPMPVAETFTFAD----------------EQGRSLADVAR----------LDTLVTVVDAFNFLKDWEDTGELRERGLAAGQEDERTVVDLLVEQVEFADVLVLNKTDLVSPERLGELESILRQLNPGARLVRSRHGQVPLSEVLETGLFDMEKAQRAPGWLQTLRGEALPE------------------------------------------------------------TEEYGIGSFVFRARRPFHPGRLWEFIHGSWKGLLRSKGFFWLATRMDVTGVWAQAGGACAFEPAGLW----WDAVPREEWPEEPESRAE---LEREMQAPWGDRRQELVFITRQVDQALLRAALEECLLTGEEMAPGPAGWS-QLEDPFPPW 395
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: A0A0K1QC32_9DELT (Putative metal chaperone, involved in Zn homeostasis n=1 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1QC32_9DELT) HSP 1 Score: 295 bits (755), Expect = 9.870e-87 Identity = 195/507 (38.46%), Postives = 278/507 (54.83%), Query Frame = 3 Query: 603 EKNSMRVTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVM--GHMPSVLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIGLGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAWE 2117 + + V++LSGFLGAGKTT++ +V+ A + L +AVIVNDM++VNIDA+L+ G AG+++R+D + V MQ+GCICCTLR+DL+L V +A+ G+ +L++ESTGIS+P PVAE +GD+G ++ A+ LDT+VTVVD+T FL + DDL R + E D RT+ DLLV QVEFA+V++L+K DL AAD+ LE+++R LN ARI+R+ ++ LA++L TG FD + A QA GW++ + G+H T ET+G+ SF +R+RRPFHP R F+ + VLRSKGF WLA+R D +G+W+ AGG+ + E G W Y ++E DD A + AA + + RR ELVFIG MD +A+RA L C+L++ EM+ GP WR + DPFPAW+ Sbjct: 6 DSQKLPVSVLSGFLGAGKTTILNHVL--ANREGLRVAVIVNDMSEVNIDARLVETG----AGKLSRLDEKLV---------EMQNGCICCTLREDLLLEVAKLAKEGRFDYLLVESTGISEPLPVAETFTF----------------EGDDGRSLSDVAR----------LDTMVTVVDATRFLRDWYSEDDLRARRIALSEDDERTVPDLLVQQVEFADVLVLSKLDLVAAADVPRLESMLRSLNRDARIVRSERGKLPLADILNTGLFDFERAAQAPGWLKEMR-------------------------------------------------------GEHAPET-----ETYGITSFVYRSRRPFHPARFSAFLDEGSYWRGVLRSKGFFWLASRLDVIGLWSHAGGAASCEAAGIW-----YAALPKDEWPDD-AESRAA-IERDFEGPFGDRRQELVFIGDRMDHEAMRAALEACVLTDGEMSEGPVSWR-SYEDPFPAWQ 403
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: A0A257AYN9_9BACT (CobW C-terminal domain-containing protein n=1 Tax=Chloracidobacterium sp. CP2_5A TaxID=2012633 RepID=A0A257AYN9_9BACT) HSP 1 Score: 293 bits (751), Expect = 3.780e-86 Identity = 204/505 (40.40%), Postives = 268/505 (53.07%), Query Frame = 3 Query: 621 VTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPS-----VLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIG-LGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAWE 2117 VT+LSGFLGAGKTTL+ +++R +R+ AVIVNDM+++NIDAQL+A GD + + RV+ + V M +GCICCTLR+DL++ V +AR G+ +L+IESTGIS+P PVAE +D + G +E A+ LDT+ TVVD+ SFL + R A L ER LE D RT+ADLL+ QVEFA+V+++NK DL +A ++A L+ ++RRLNP AR++ EV L EVLGTG F + A+Q+AGW++ L G+H T ET+G+ SF +R RRPFHP RL F+ G VLRSKGF WLATR +AVGVW+QAGGS E GGSW + EEE D+A + + D RR ELVFIG M DA+ A L CLL+E E G W DPF +WE Sbjct: 10 VTVLSGFLGAGKTTLLNHILRNREGKRV--AVIVNDMSEINIDAQLVANGDAA----LNRVEEKLV---------EMSNGCICCTLREDLLIEVGRLAREGRFDYLLIESTGISEPLPVAETFAFAD----------------ETGRSLSEVAR----------LDTMATVVDAASFLRDYRAAQSLAERRLELGPDDDRTVADLLIEQVEFADVIIVNKVDLVSAEELAELQGVLRRLNPEARLMTCRLGEVPLTEVLGTGRFSFERASQSAGWLKELR-------------------------------------------------------GEHVPET-----ETYGISSFAYRRRRPFHPNRLWAFLHGETGGDEWRGVLRSKGFFWLATRMNAVGVWSQAGGSCRIEPGGSW-----WATQPEEEWPGDEALRNE--IRSQFDGLFGDRRQELVFIGDRRMRRDAIEAALDNCLLTEAEARRGLNAWAM-LPDPFGSWE 405
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: A5UXW5_ROSS1 (Cobalamin synthesis protein, P47K n=2 Tax=Roseiflexus sp. (strain RS-1) TaxID=357808 RepID=A5UXW5_ROSS1) HSP 1 Score: 293 bits (751), Expect = 4.400e-86 Identity = 199/498 (39.96%), Postives = 260/498 (52.21%), Query Frame = 3 Query: 621 VTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPSVLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIGLGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAW 2114 VT+LSGFLG+GKTTL+ +V+ A L +AVIVNDM+++NIDAQL+ G + ++R D + V M +GCICCTLR+DL++ V +AR G+ +L+IESTGIS+P PVAE +D + G AE A+ LDT+VTVVDS +F + DDL +R L A E D R++ DLL+ QVEFA+V++LNK DL + LEAL+R+LNP ARI+RT V L E+L TG FD + A QA GW++ L E + E E +G+ SF +RARRPFHP+R + P VLRSKG +WLATR G+W+QAG + E GG W + E+E DD A ++ V RR ELV IG MDE ALRA L CLL++ EMA GPEGW +F DPF W Sbjct: 20 VTVLSGFLGSGKTTLLNHVL--ANRSGLRVAVIVNDMSEINIDAQLVRSGGAA----LSRTDERLV---------EMSNGCICCTLREDLLVEVARLAREGRFDYLLIESTGISEPLPVAETFTFAD----------------ETGVSLAELAR----------LDTMVTVVDSFNFPRDFFSTDDLRDRNLSAGEEDERSVVDLLIDQVEFADVLVLNKVDLVDPDAVDHLEALLRKLNPDARIVRTSFGRVPLHEILNTGRFDFERAAQAPGWLKELRGEHTPE------------------------------------------------------------TEEYGISSFVYRARRPFHPQRFWDLIHDAWPGVLRSKGLIWLATRMQVSGIWSQAGNACRVEPGGMW-----WAALLEDELPDDPD--VEAQLAQVWHSRWGDRRQELVLIGQDMDEAALRARLDACLLTDAEMALGPEGWA-QFEDPFGVW 408
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: A0A8I1NIU8_9ACTN (Zinc metallochaperone GTPase ZigA n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A8I1NIU8_9ACTN) HSP 1 Score: 292 bits (747), Expect = 1.240e-85 Identity = 193/498 (38.76%), Postives = 266/498 (53.41%), Query Frame = 3 Query: 621 VTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPSVLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIGLGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAW 2114 VT+LSGFLGAGKTTL+ +++ +R+ AVIVNDM++VN+DA+LL G+ S + RV+ + V M +GCICCTLR+DL++ V +AR G+ HL+IESTGIS+P PVAE +D S G ++ A+ LDT+VTVVD+++FLD+ ++L +RG D RT+ DLLV QVEFANV+L+NKADLA++A++A +EAL+ LNP A+++R+V ++V L +V TG FDLDEA + GW+ L EE E E +G+ SF + RRPFHPERL + P V+R+KGF W+ATRH+ VG W+QAG + G W + E ++ + + + G+ RR EL FIG G+D+ A+ A L CLLSE EMAGGP W E DP PAW Sbjct: 15 VTVLSGFLGAGKTTLLEHILGNREGRRV--AVIVNDMSEVNVDAELLRSGEAS----IDRVEERMV---------EMSNGCICCTLREDLLVEVADLAREGRFDHLLIESTGISEPMPVAETFTFADQS----------------GRSLSDVAR----------LDTMVTVVDASTFLDDCGSIEELRDRGESLGPEDERTVVDLLVDQVEFANVILVNKADLASSAELARIEALLSALNPQAKVVRSVKADVPLGQVFDTGLFDLDEAASSPGWLATLRGEEIPE------------------------------------------------------------TEEYGISSFVYSRRRPFHPERLWKELESAWPEVVRAKGFFWVATRHNLVGEWSQAGRVLSVGPIGMW-----WAALDPAELAANRELFEESAEAAWQEPWGD-RRQELAFIGAGLDQAAIEARLDACLLSEGEMAGGPLAWG-ELPDPLPAW 404
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Match: UPI001B8B4E27 (zinc metallochaperone GTPase ZigA n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8B4E27) HSP 1 Score: 290 bits (742), Expect = 7.210e-85 Identity = 205/505 (40.59%), Postives = 267/505 (52.87%), Query Frame = 3 Query: 621 VTLLSGFLGAGKTTLMRNVVRQAREQRLSLAVIVNDMADVNIDAQLLARGDGSEAGEVARVDVQSVGSGASGVSVAMQDGCICCTLRDDLVLAVEAIARAGKHQHLIIESTGISDPDPVAEALVISDGSIAGGGHHFAADDDGDEGSEEAEPAKRDGEEEGLFSLDTLVTVVDSTSFLDELRKADDLEERGLEAEEGDTRTIADLLVSQVEFANVVLLNKADLATAADIATLEALVRRLNPAARILRTVSSEVGLAEVLGTGAFDLDEATQAAGWIQALNDEESEEHQILDSARVDADDGGRADRDQGDDDVSMXXXXXXXXXXXXXXXPPGQQDGDHGRTTSSRPAETFGVDSFTFRARRPFHPERLMGFVMGHMPS-----VLRSKGFLWLATRHDAVGVWNQAGGSFATENGGSWDGDGGYTESGEEEAQDDQARAPAAGVSNVVDDGGNTRRNELVFIG-LGMDEDALRAELRRCLLSEEEMAGGPEGWRREFSDPFPAWE 2117 VT+LSGFLGAGKTTL+ +++ +R+ AVIVNDM++VNIDAQL+A+G S + R++ + V M +GCICCTLR+DL++ V +AR G+ +L+IESTGIS+P PVAE +D + GH + + LDTLVTVVD+ +FL + R+A L+ER LE D RTIADLLV QVEFA+V+L+NKADL T AD+A L ++RRLNP AR++ +V L+EVLGTG F + A Q+AGW++ L G+H T ET+GV SF +R RRPFHPERL F G VLRSKGF WLA+R VGVW+QAGG+ E GG W T+ E D+ RA + ++ D RR ELVFIG M++ A+ A L CLL+E E GP W D F WE Sbjct: 8 VTVLSGFLGAGKTTLLNHILCNREGKRV--AVIVNDMSEVNIDAQLVAQGGAS----LNRIEEKLV---------EMSNGCICCTLREDLLVEVGRLAREGRFDYLLIESTGISEPLPVAETFTFTDAT----GHSLS----------------------DVARLDTLVTVVDAQNFLRDYREAQSLKERRLEVGPEDDRTIADLLVEQVEFADVILINKADLVTDADLAELRGILRRLNPDARVVTCRFGQVPLSEVLGTGRFSFERAAQSAGWLKELR-------------------------------------------------------GEHPPET-----ETYGVSSFVYRRRRPFHPERLWAFFHGETTGNEWQGVLRSKGFFWLASRMAVVGVWSQAGGACRIEPGGYW----WATQPEESWGVDESLRAE---IRSLFDGLFGDRRQELVFIGDRRMNQAAIEAALDACLLTEAEARRGPAAWAA-LPDSFGDWE 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1020.220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1020.220.1 >prot_H-canaliculatus_F_contig1020.220.1 ID=prot_H-canaliculatus_F_contig1020.220.1|Name=mRNA_H-canaliculatus_F_contig1020.220.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=678bp MSPRSATVWCALLVNASTRRLVLASTAATRRVQPAAFISTSSSISRPCKTback to top mRNA from alignment at H-canaliculatus_F_contig1020:14706..23548+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1020.220.1 ID=mRNA_H-canaliculatus_F_contig1020.220.1|Name=mRNA_H-canaliculatus_F_contig1020.220.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8843bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1020:14706..23548+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1020:14706..23548+ >mRNA_H-canaliculatus_F_contig1020.220.1 ID=mRNA_H-canaliculatus_F_contig1020.220.1|Name=mRNA_H-canaliculatus_F_contig1020.220.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4068bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1020:14706..23548+ (Hapterophycus canaliculatus Oshoro5f female)back to top |