Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 958 |
| Cds size | 756 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928648.1652114-UTR-H-canaliculatus_F_contig102:36137..36283 | 1622928648.1652114-UTR-H-canaliculatus_F_contig102:36137..36283 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig102 36138..36283 - |
| 1696845512.2247808-UTR-H-canaliculatus_F_contig102:36137..36283 | 1696845512.2247808-UTR-H-canaliculatus_F_contig102:36137..36283 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig102 36138..36283 - |
| 1622928648.213891-UTR-H-canaliculatus_F_contig102:37877..37933 | 1622928648.213891-UTR-H-canaliculatus_F_contig102:37877..37933 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig102 37878..37933 - |
| 1696845512.253296-UTR-H-canaliculatus_F_contig102:37877..37933 | 1696845512.253296-UTR-H-canaliculatus_F_contig102:37877..37933 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig102 37878..37933 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928648.182394-CDS-H-canaliculatus_F_contig102:36283..36811 | 1622928648.182394-CDS-H-canaliculatus_F_contig102:36283..36811 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig102 36284..36811 - |
| 1696845512.2341354-CDS-H-canaliculatus_F_contig102:36283..36811 | 1696845512.2341354-CDS-H-canaliculatus_F_contig102:36283..36811 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig102 36284..36811 - |
| 1622928648.1975782-CDS-H-canaliculatus_F_contig102:37649..37877 | 1622928648.1975782-CDS-H-canaliculatus_F_contig102:37649..37877 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig102 37650..37877 - |
| 1696845512.244542-CDS-H-canaliculatus_F_contig102:37649..37877 | 1696845512.244542-CDS-H-canaliculatus_F_contig102:37649..37877 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig102 37650..37877 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig102.216.1 >prot_H-canaliculatus_F_contig102.216.1 ID=prot_H-canaliculatus_F_contig102.216.1|Name=mRNA_H-canaliculatus_F_contig102.216.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=252bp
MFAASRWAAGPERLSKLWSPCEVADFNRRRPTAQQTSPLTRRFASHLWVT
NSTSMTTPVRIIAEYDFHNVIFCREQHFTTKQTIAFREIALSVFETAIVN
GKLQPGEAFEAFTHRVLALAGAEEAGTNATGTIFMAAKCGSPLPCKSGAS
AAASGETADPGQGGGSSDSASATGNSGVSDGVGDGEGGESEFSVGDVGAI
TKFVAQGFYRNFKLYRMCFQHEQRCCRETRQVQVETPLEIPPLHEGAESN
S* back to topmRNA from alignment at H-canaliculatus_F_contig102:36138..37933- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig102.216.1 ID=mRNA_H-canaliculatus_F_contig102.216.1|Name=mRNA_H-canaliculatus_F_contig102.216.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1796bp|location=Sequence derived from alignment at H-canaliculatus_F_contig102:36138..37933- (Hapterophycus canaliculatus Oshoro5f female)
AGCAAAATGTTAATGCTGCTGGAAATGCTAATGCTGCTCCATGCGGTTTG
TAAATCATGTTCGCAGCTTCACGATGGGCGGCTGGTCCAGAGCGGCTCTC
TAAATTATGGTCACCTTGTGAAGTTGCAGATTTTAATAGGAGAAGGCCTA
CCGCCCAACAAACGTCGCCTTTGACCAGGCGTTTCGCGAGCCACTTGTGG
GTGACTAACTCTACGAGCATGACCACCCCGGTTAGAATCATCGCGGAGTA
CGATTTCCACAACGTCATCTTCTGCAGAGAGCAGGTAGACGAACAAACCC
TGCGCTCGAGGAAGCAGTTCAAGTGTAAATTTACAGTAGAAAAAGAGATA
GGGCCTTGCAAGTCGCCGAGCGCTGGCAGCGCTGGCACTTGGTAGAGCTA
TTTGTAATAACACGACGAAAGTTGTTTCTGCCCCTTAGGATGATGACTTG
AGTGATTTCGAAGCCACCCGCTAACTTTCTCGACGTATAAGAAATAAACA
GGGGTTCGTGCTCCAGACGAAATACTTATCTCTCAAAGGTCTTTTGCTCT
CAGCAAAAAGGGAGGGATGATAATTGATGGCTAACACATCCCGGTGGGAT
CCGTCCTGAGTCCTACGATGCCAACAGCGCTCTTTCGACAATACTTTCCC
GGCCCTTACCCATTCACCCTTAGATATAGGTCTATCCCCATCTCTTCGAA
CCCCACGTGGAACGACGATGTTCCGTTAGTGCGCGATCCGGCCTACAAAA
CGCCAACGTATCGATATGTTCTCCGCTCGTAGTAACCGCCTGTGCAGTGC
ATGAAGGAACCCTGTGCAAAGTTGAGGTCGACGATAATTGCGCCCGGAGA
AAGTCTTCGGGGACGAGCCGCATCTCTCTCAAGCATCAGGCAGGATACTT
GTCGTCAGGAGAAGATCGGCGACGGTCATGAAACTGGTACAACTGCTGAA
GCAAACCCTAACTTTCAAAGTAGGAAAAGAAGCACGCCAATCCTTAAGAC
TACAGAGCATGCTGCCAGTCGAGTGGACCATGAATAACTTTGACACCGTA
TGCTCAGTGGCATGCGATCGATGCACACCTATCCCTTGTACACCTGTCAC
CGACGTCGCGTATCATTCGCAGCACTTCACCACCAAGCAAACAATCGCTT
TTCGTGAAATAGCACTGAGCGTCTTCGAGACAGCCATTGTAAACGGCAAG
CTTCAGCCCGGTGAAGCATTCGAAGCATTCACCCACCGGGTTCTCGCGCT
TGCCGGGGCAGAGGAGGCGGGCACGAATGCGACCGGGACCATTTTCATGG
CAGCAAAATGTGGCAGCCCGCTTCCTTGCAAGAGTGGCGCTTCTGCGGCT
GCGAGTGGAGAAACGGCTGACCCTGGTCAAGGAGGTGGTAGCAGCGATAG
TGCTTCGGCGACTGGGAATAGCGGAGTCAGTGATGGGGTAGGCGACGGCG
AAGGCGGCGAGTCGGAGTTTTCTGTGGGCGATGTCGGTGCAATCACGAAG
TTCGTCGCGCAGGGGTTCTACCGCAACTTTAAGCTGTACCGGATGTGCTT
CCAGCACGAGCAAAGATGTTGTCGAGAGACTAGGCAGGTTCAGGTGGAGA
CACCCCTTGAAATACCGCCACTGCACGAGGGGGCCGAATCCAACTCATAG
AACGCGGCGAAGTCGACGTCTGACTCACTCGACACGGTTGAAGACGAAGC
GACTGTACGACGACTTCGGGGCCTGGCTCGTTCTCTTCCACGCATGCACC
GTCCGCTGTTCATACTTTGAACCGAAAATCAAATTTTCAACCGAGG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig102:36138..37933- >mRNA_H-canaliculatus_F_contig102.216.1 ID=mRNA_H-canaliculatus_F_contig102.216.1|Name=mRNA_H-canaliculatus_F_contig102.216.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1512bp|location=Sequence derived from alignment at H-canaliculatus_F_contig102:36138..37933- (Hapterophycus canaliculatus Oshoro5f female)
ATGTTCGCAGCTTCACGATGGGCGGCTGGTCCAGAGCGGCTCTCTAAATT
ATGGTCACCTTGTGAAGTTGCAGATTTTAATAGGAGAAGGCCTACCGCCC
AACAAACGTCGCCTTTGACCAGGCGTTTCGCGAGCCACTTGTGGGTGACT
AACTCTACGAGCATGACCACCCCGGTTAGAATCATCGCGGAGTACGATTT
CCACAACGTCATCTTCTGCAGAGAGCAGATGTTCGCAGCTTCACGATGGG
CGGCTGGTCCAGAGCGGCTCTCTAAATTATGGTCACCTTGTGAAGTTGCA
GATTTTAATAGGAGAAGGCCTACCGCCCAACAAACGTCGCCTTTGACCAG
GCGTTTCGCGAGCCACTTGTGGGTGACTAACTCTACGAGCATGACCACCC
CGGTTAGAATCATCGCGGAGTACGATTTCCACAACGTCATCTTCTGCAGA
GAGCAGCACTTCACCACCAAGCAAACAATCGCTTTTCGTGAAATAGCACT
GAGCGTCTTCGAGACAGCCATTGTAAACGGCAAGCTTCAGCCCGGTGAAG
CATTCGAAGCATTCACCCACCGGGTTCTCGCGCTTGCCGGGGCAGAGGAG
GCGGGCACGAATGCGACCGGGACCATTTTCATGGCAGCAAAATGTGGCAG
CCCGCTTCCTTGCAAGAGTGGCGCTTCTGCGGCTGCGAGTGGAGAAACGG
CTGACCCTGGTCAAGGAGGTGGTAGCAGCGATAGTGCTTCGGCGACTGGG
AATAGCGGAGTCAGTGATGGGGTAGGCGACGGCGAAGGCGGCGAGTCGGA
GTTTTCTGTGGGCGATGTCGGTGCAATCACGAAGTTCGTCGCGCAGGGGT
TCTACCGCAACTTTAAGCTGTACCGGATGTGCTTCCAGCACGAGCAAAGA
TGTTGTCGAGAGACTAGGCAGGTTCAGGTGGAGACACCCCTTGAAATACC
GCCACTGCACGAGGGGGCCGAATCCAACTCATAGCACTTCACCACCAAGC
AAACAATCGCTTTTCGTGAAATAGCACTGAGCGTCTTCGAGACAGCCATT
GTAAACGGCAAGCTTCAGCCCGGTGAAGCATTCGAAGCATTCACCCACCG
GGTTCTCGCGCTTGCCGGGGCAGAGGAGGCGGGCACGAATGCGACCGGGA
CCATTTTCATGGCAGCAAAATGTGGCAGCCCGCTTCCTTGCAAGAGTGGC
GCTTCTGCGGCTGCGAGTGGAGAAACGGCTGACCCTGGTCAAGGAGGTGG
TAGCAGCGATAGTGCTTCGGCGACTGGGAATAGCGGAGTCAGTGATGGGG
TAGGCGACGGCGAAGGCGGCGAGTCGGAGTTTTCTGTGGGCGATGTCGGT
GCAATCACGAAGTTCGTCGCGCAGGGGTTCTACCGCAACTTTAAGCTGTA
CCGGATGTGCTTCCAGCACGAGCAAAGATGTTGTCGAGAGACTAGGCAGG
TTCAGGTGGAGACACCCCTTGAAATACCGCCACTGCACGAGGGGGCCGAA
TCCAACTCATAG back to top
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