mRNA_H-canaliculatus_F_contig102.215.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Match: D7G0C7_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C7_ECTSI) HSP 1 Score: 786 bits (2030), Expect = 3.430e-259 Identity = 436/752 (57.98%), Postives = 513/752 (68.22%), Query Frame = 3 Query: 1551 PNGKVNLSGGEAAALALLRCPRIGWSPRPEEVMEALSEGEGSLCAYSVFPSEFDVEV--QIQGNMVADAAGXXXXXXXXXXXXKDGGWGSEAREAAAELVRTGLARTSGFGGMLALAPKMEETCELILKIFLGSSSDLGRETMALCALGYLATGPMTMGVYPPAVPGLLEAAQDAQQRAKERCDIARARPDGIGGQEWDTRGQTAGIGRMRGLVGGLCVKLHQWCLEVSRPAGNSGGVDLSILGRVSKAGFSNNEVGSNPASALIWSGPMSQALGLLGGATGLVGNPSRNNGSSNSGGEATST------GCEHDWMAAASREERLRETACLRLKGASARVLGVISSVVEGLQKQKMYGQAVTLLRLLVRRDQGLAGQGYAEAAPDLVWAADWVTSNYRGYAYARLAVNLKHLKQPGRRQLEVARDACEDDGVRGGERVELRERHRKLQKDHGDSQDSPAKEQQYRAIEHTVVVHMETQKEGNRKSKSGGRKLYFNKPADHGKQRWGEKNALNVEQVLLRERYLSGGWLGLHCESSLIMFLVMLLLWEEIFDPQVKAALPHCSMTRPVDLLDKYFFVRRQGLPRRLLGIYRSSDEELWSDLDLRYERYKGVTAAWCDWKRFPKQQVMEISVAIGGRRLSELLRTTTSNIPYLRCGFPDVVLWRPKSHERSAPRACGSGVGRNGNIADETELAWNSRTHFGLGWQGHGFGWEVEVVEVKSKGDITSDVQKAWLMELQNARVSAMVARVLAENEA 3782
P ++ L GGEAAAL+LL CP IGWSPRPE+VMEALSEG GSL AYS+ PSEFD V ++G V GG G A+ A ELVR G AR G+L L PKME+TC+ +LKIFLG D R+ MA LG + PMT + PPA+P L EA Q A R+ + G E D GRM GLVG LCVKLH WC ++ RP G S ++LS L V+ NE +PAS L+WSGPM++ALGLLGGA S G H W+AA SRE+R RE AC RLK A++RV+ VI S+VEGLQKQK Y AV LLRL+VR DQGLAG Y EAAPDLVWAADWVTS +RGYAY RLA+NLKHLK PGRRQLE +AC+DDGV+GG+RVELRER+ L K GDSQD+P KE+++R E +VV+METQKEGN++SKSGGRKLYF+KP D G+ RWGE+N+LNVE+VLLRERY SGGWLGLHCESSL MFL +LLLWEE+FD +V AALPH M+ P+D+ DK+F RR+GL RRL I RSSDE+LW D+ RY+R+ GV A WCDW RFPKQQVMEI A GGRRLS+LL TTT+ I LR GFPDVVLWRPKS + A G G G +E L W+++THFGLGW+G+G GWEV+VVEVKSK DITS QKAWLMEL+NARV AMV RVLAE EA
Sbjct: 181 PERQIGLYGGEAAALSLLPCPLIGWSPRPEDVMEALSEGGGSLRAYSISPSEFDTGVADNVRGQEVTPDIPKVKDLGVEQKREAAGG-GGRAQAAVDELVRVGYARKRAILGLLTLTPKMEDTCKAVLKIFLGQDWDPQRDVMARITLGLIKMAPMTRRMCPPAMPILWEAQQARNFVATSGLCRGRSSENQGIGVELD--------GRMSGLVGDLCVKLHLWCYKILRPRGGSRDIELSDLNEVT-----TNETNGHPASPLVWSGPMAKALGLLGGAVAHSSGTSIXXXXXXXXXXKVDEIAVGDGGGGHRWIAALSREKRTREAACFRLKDAASRVVSVIGSIVEGLQKQKTYEVAVMLLRLMVRSDQGLAGSDYREAAPDLVWAADWVTSKHRGYAYTRLAINLKHLKNPGRRQLETVMEACDDDGVQGGDRVELRERYDFLHKKFGDSQDTPLKERRFRYEEEVLVVNMETQKEGNQRSKSGGRKLYFDKP-DVGEPRWGERNSLNVEEVLLRERYRSGGWLGLHCESSLNMFLTVLLLWEEVFDERVHAALPHVIMSSPLDMQDKFFCSRREGLSRRLRTISRSSDEQLWLDVGQRYDRFSGVVAIWCDWNRFPKQQVMEICAAFGGRRLSDLLSTTTTTITQLRFGFPDVVLWRPKSDKGVAESRSGGGSG----TGEEEGLDWSAKTHFGLGWEGYGQGWEVQVVEVKSKDDITSHAQKAWLMELENARVPAMVTRVLAEKEA 913
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Match: D7G0C5_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C5_ECTSI) HSP 1 Score: 737 bits (1902), Expect = 4.260e-239 Identity = 489/1057 (46.26%), Postives = 615/1057 (58.18%), Query Frame = 3 Query: 819 PNPSQYQLTSAAEAVQRRPWGTNPPQ-RRPRQQE-NDFAAAAF---------------------TLQQGEWGRGGEKVAKASAPVPASTHLPLGEGGKSCVGQNQQQ-HDQPPFVVVGLIGEFGDRVLLLPTTRERRHAMRALPGAAVPLTWPDAGGAIRTAALTRTKAKPIVCNPLPMLATLLAWMREFSPEALPEVRCPL-LPGGLSPRQPSCSGSRPPCSXXXXXXXXXDAGSE-------------------------------------LSLAAAWLLAHLTFGRENYAEPQSVFARASLPPNGKVNLSGGEAAALALLRCPRIGWSPRPEEVMEALSEGEGSLCAYSVFPSEFDVEVQIQGNMVADAAGXXXXXXXXXXXXKDGGWGSEAREAAAELVRTGLARTSGFGGMLALAPKMEETCELILKIFLGSSSDLGRETMALCALGYLATGPMTMGVYPPAVPGLLEAAQDAQQRAKERCDIARARPDGIGGQEWDTRGQTAGIGRMRGLVGGLCVKLHQWCLEVSRPAGNSGGVDLSILGRVSKAGFSNNEVGSNPASALIWSGPMSQALGLLGGATGLVGNPSRNNGSSNSGGEATSTGCEHDWMAAASREERLRETACLRLKGASARVLGVISSVVEGLQKQKMYGQAVTLLRLLVRRDQGLAGQGYAEAAPDLVWAADWVTSNYRGYAYARLAVNLK-HLKQPGRRQLEVARDACEDDGVRGGERVELRERHRKLQKDHGDSQDSPAKEQQYRAIEHTVV--VH--METQKEGNRKS--KSGGRKLYFNKPADHGKQRWGEKNALNVEQVLLRERYLSGGWLGLHCESSLIMFLVMLLLWEEIFDPQVKAALPHCSMTRPVDLLDKYFFVRRQGLPRRLLGIYRSSDEELWSDLDLRYERYKGVTAAWCDWKRFPKQQVMEISVAIGGRRLSELLRTTTSNIPYLRCGFPDVVLWRPKSHERSAPRACGSGVGRNGNIADETELAWNSRTHFGLGWQGHGFGWEVEVVEVKSKGDITSDVQKAWLMELQNARVSAMVARVLAENEA 3782
P+PS T A VQR WG Q RR RQQ+ +F A TL++ +WGRG A+TH LG G C+ +Q+ HDQPPFV++G++ + R LLLPTTRERR M +L A+VP+TW D+ G RTA LTRTKAKP CNPLPMLA LLAWMRE P ALPE R + L L+ + PS S SR + XXXX LSL AAWLLAHL FG + + F R L NGKV+LSG EA A+ LL CP IGWSPRP EV++A+SEG G LCAYSV + F+ + I G +AA ELV G AR FG MLAL KME+ CEL+LKIFL + D+ RE A ALG TGP+ G+ PP +P L R K R R GG E +++ GRM GLVG LCV+LH WC +V R G DL +L + E + S W+GPM+QA GLLGGA V R+ S GG A++ W+A+ S+EERL E ACLRLK A VL V+ + E QK+ + +AV + RLLVRRDQGLAG Y + APDLVWAADWVT + RG+AY RLA+NLK HLK+P QL+V + AC+DD VRGG+RV+L ER++ L K GD Q + + +Q + V +H +ETQK+G++ + + GGRKLY+ A G++RW E + NVE+V++RERY +GGWLGLH ES LIMF++MLLLWEE+FD V+AA+PHC M P+D DK+F RR+GLP RL I + +D +L+SD+ RY+R +GV + WCDW FPKQQ+MEI VA GG+RLS+LL+T T+N+ + GFPDVVL RPK + G+G +G DE + W +RTHFGLGWQGHG GWEVEVVEVKSKGD S QKAWL EL++ V AMV+RV+AENEA
Sbjct: 30 PHPSDAAAT-AGVGVQRCEWGQTTQQVRRERQQQPQEFPPAVLALQLQEXXXXXXXQPRQEASPTLRRQQWGRG----------ASAATHS-LGGG---CLRDDQEAGHDQPPFVMMGMLDD--SRALLLPTTRERREVMGSLSSASVPVTWTDSTGQSRTAILTRTKAKPKPCNPLPMLANLLAWMRELPPGALPENRLRIRLETLLALQSPSKSVSRQSSTIGKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLGAAWLLAHLMFGMDGGGKATGPFEREIL--NGKVSLSGAEANAMPLLLCPLIGWSPRPREVIQAMSEGAGILCAYSVELAAFETQTGICG------------------------------KAADELVHAGFARKVEFGEMLALDQKMEDACELVLKIFL-CNWDVDREVRAQVALGLTKTGPVASGLCPPDIPSLFSG------RQKWRSSTTAVR----GGDE-----RSSCRGRMGGLVGDLCVRLHSWCHQVMRA-----GRDLRVLLLLQVL---KGETAGDLTSQREWTGPMAQAFGLLGGAE--VSYHKRHRDSI--GGTASA-----GWVASLSKEERLLEVACLRLKQAMKWVLVVVRGLAEESQKKGEHDEAVLIFRLLVRRDQGLAGPMYRDTAPDLVWAADWVTCDQRGFAYTRLAINLKTHLKRPREEQLDVVKAACDDDCVRGGDRVDLWERYQGLHKKCGDRQTASLRGRQRSPLWDPKVEDIHPPVETQKQGSQGTLGEKGGRKLYYYNDAAPGERRWSEARSHNVEEVVIRERYSAGGWLGLHGESKLIMFILMLLLWEEVFDSGVEAAVPHCIMISPLDTSDKFFTTRREGLPDRLATIGQYADRQLFSDVGQRYDRLRGVRSGWCDWNVFPKQQIMEICVAFGGKRLSDLLKTLTNNLADMDKGFPDVVLRRPKGAD------FGAGGSSSGGGRDERD--WKARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAMVSRVVAENEA 996
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Match: A0A6H5KHC9_9PHAE (VRR-NUC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC9_9PHAE) HSP 1 Score: 349 bits (895), Expect = 3.640e-99 Identity = 357/1032 (34.59%), Postives = 457/1032 (44.28%), Query Frame = 3 Query: 819 PNPSQYQLTSAAEAVQRRPWG--TNPPQRRPRQQENDF---AAAAFTLQQGEWGRGGEK--VAKASAPV---------PASTHLPLGEGGKSCVGQNQQQ-HDQPPFVVVGLIGEFGDRVLLLPTTRERRHAMRALPGAAVPLTWPDAGGAIRTAALTRTKAKPIVCNPLPMLATLLAWMREFSPEALPEVRCPL-LPGGLSPRQPSCS--GSRPPCSXXXXXXXXXDAGSELSLAAAWLLAHLTFGRENYAEPQSVFARASLPPNGKVNLSGGEAAALALLRCPRIGWSPRPEEVMEALSEGEGSLCAYSVFPSEFDVEVQIQGNMVADAAGXXXXXXXXXXXXKDGGWGSEAREAAAELVRTGLARTSGFGGMLALAPKMEETCELILKIFLGSSSDLGRETMALCALGYLATGPMTMGVYPPAVPGLLEAAQDAQQRAKERCDIARARPDGIGGQEWDTRGQTAGIGRMRGLVGGLCVKLHQWCLEVSRPAGNSGGVDLSILGRVSKAGFSNNEVGSNPASALIWSGPMSQALGLLGGATGLVGNPSRNNGSSNSGGEATSTGCEHDWMAAASREERLRETACLRLKGA--------SARVLGVISSVVEGLQKQKMYGQAVTLLRLLVRRDQGLAGQGYAEAAPDLVWAADWVTSNYRGYAYARLAVNLK-HLKQPGRRQLEVARDACEDDGVRGGERVELRERHRKLQKDHGD----SQDSPAKEQQYRAIEHTVV--VH--METQKEGNRK--SKSGGRKLYFNKPADHGKQRWGEKNALNVEQVLLRERYLSGGW--LGLHCESSLIMFLVMLLLWEEIFDPQVKAALPHCSMTRPVDLLDKYFFVRRQGLPRRLLGIYRSSDEELWSDLDLRYERYKGVTAAWCDWKRFPKQQVMEISVAIGGRRLSELLRTTTSNIP---YLRCGFPDVVLWRPKSHERSAPRACGSGVGRNGNIADETELAWNSRTHFGLGWQGHGFGWEVEVVEVKSKGDITSDVQKAWLMELQNARVSAMVARVLAENEA 3782
P+PS T A VQR WG T Q +QQ +F A LQ EWG ++ + +AS + A+TH LG G C+ +Q+ HDQPPFV++G++ + R L+LPTTRERR M++L A+VP+TW D+ G RTA LTRT+A+P CNP PMLA LLAWMRE P ALPE R + L L+P+ PS + XXXXXXXXX +LS AAWLLAHL F R PNGK A+SEG GSLC YSV + F+ I +AA ELV G AR FG MLAL K TGPM G+ PP +P L Q + K R GG + +++ GRM GLVG L G+ + +L +V K E + S W+GPM+QA GLLGGA R++ GG ++ DW+A+ +EERL E ACLRLK A VL V+ + EG K + +AV RLLVRRDQ AY RLA NLK HLK+P QL+V + AC+DD VRGG+RV+L ER++ L K G Q + K QQ + V +H +ETQK+G++ + GGRKLY+ Y+ G LG C EE+FD V+AA+PHC + P+D+ DK+F RR+GLP RL I + +D +L+SD+ RY+R+ A G L + IP Y G + L G GR+ WN+ THFGLGWQGHG WEVEVVEVKSKGD QKAWL EL++ V AMV+RV+AENEA
Sbjct: 30 PHPSDAAAT-AGVGVQRCEWGQTTQQVQGERQQQSQEFPPAVLAVLALQLQEWGETQQQQPLQEASPTLRRRQWGRCASAATHS-LGGG---CLRDDQEAGHDQPPFVMMGMLDD--SRALMLPTTRERREVMQSLSSASVPVTWTDSTGQSRTAILTRTEARPKPCNPFPMLANLLAWMRELPPGALPENRLRVRLETLLAPQSPSNNKXXXXXXXXXXXXXXXXXXXXXDLSRGAAWLLAHLML--------TGPFEREI--PNGK------------------------------AMSEGGGSLCTYSVEVAAFETHTGI------------------------------CDKAADELVHAGFARKVEFGEMLALDQK---------------------------------TGPMASGLCPPDIPSLFSGRQTWRSSTK----AVR------GGDK-----RSSCRGRMGGLVGDL-------------------GLRVLLLLQVLKG-----ETAGDLTSRREWTGPMAQAFGLLGGAEATYHKRRRDS----IGGTVSA-----DWVASLWKEERLLEVACLRLKQAMKWVSNLSKPSVLVVVRGLAEGSHKDGEHDEAVLTFRLLVRRDQ----------------------------AYTRLATNLKTHLKRPREEQLDVVKAACDDDCVRGGDRVDLWERYQSLHKQFGGCTGTQQTASLKRQQRSPLWDPKVEDIHPPVETQKQGSQGILGEKGGRKLYY---------------------------YIDGTVPVLGWDCT-------------EEVFDSGVEAAVPHCILISPLDMSDKFFTTRREGLPGRLAMIRQYADRQLFSDVGQRYDRW-----------------------AFGDHSL------IVAKIPHAFYCCGGTAQIEL----------------GDGRD----------WNATTHFGLGWQGHGQVWEVEVVEVKSKGDTIRKEQKAWLAELEDIGVPAMVSRVVAENEA 780
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 303 bits (777), Expect = 6.750e-82 Identity = 294/1045 (28.13%), Postives = 357/1045 (34.16%), Query Frame = 3 Query: 2289 AGFSNNEVGSNPASALIWSGPMSQALGLLGGATGLVGNPSRNNGSS-------------------NSGGEATSTGCEHDWMAAASREERLRETACLRLKGASARVLGVISSVVEGLQKQKMYGQAVTLLRLLVRRDQGLAGQGYAEAAPDLVWAADWVTSNYRGYAYARLAVNLKHLKQPGRRQLEVARDACEDDGVRGGERVELRER----HRK--------------------------------------------------LQKDH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDSQDSPAKEQQYRAIEHTVVVHMETQKEGNRKSKSGGRKLYFNKPADHGKQRWGEKNALNVEQVLLRERYLSGGWLGLHCESSLIMFLVMLLLWEEIFDPQVKAALPHCSMTRPVDLL--DKYFFVRRQGLPRRLLGIYRSSDEELWSDLDLRYERYKGVTAAWCD--WKRFPKQQVMEISVAIGGRRLSELLRTTTSNIPYLRCGFPDVVLWRPKSHERSAPRACGSGVGRNGNIADETELAWNSRTHFGLGWQGHGFGWEVEVVEVKSKGDITSDVQKAWLMELQNARVSAMVARVLAENEA 3782
A +NE + AS L+WSGPM+QALGLLGGA + ++G+S N GG H W+A+ SRE+R RE AC RLK A++RV+ VI S+VEGLQKQK Y AV LLRL+VR DQGLAG Y EAAPDLVWAADWVTS +RGYAY RLA+NLKHLK+PGRRQLE +AC+DDGV+GG+RVELRER H+K + K H GD+QD+P KE+++R E +VV+M+TQKEGN++SK+GGRKLYF+KP D G+ RWGE+N+LNVE+VLLRERY SGGWLGLHCESSL MFL++LLLWEE+FD +V AALPH R + DK+F RR+GL RL I RSSDE+LW D+ RY+R+ WCD W+ + + R S+ R GFPDVVLWRPKS + +A G G G DE L W S+THFGLGW+G+G GWEV VEVKSK D TS QKAWLMEL+NARV A+V RVLAE EA
Sbjct: 7 ASLDSNETNGHLASPLVWSGPMAQALGLLGGAV------AHSSGTSIXXXXXXXXXXKVDEIAVGNGGGG-------HRWIASLSREKRTREAACFRLKDAASRVVSVIGSIVEGLQKQKTYEIAVMLLRLMVRSDQGLAGSDYREAAPDLVWAADWVTSKHRGYAYTRLAINLKHLKKPGRRQLETVMEACDDDGVQGGDRVELRERYDFLHKKFGRFTPSINDKNVVCLVKKKDGTTCNHLMKWTPSESNKQRGTGTSWLSKHIAKAHPATAKTRRDEGTPADRKEPIRAAIVHGRFIDRFIISKRVELIVAGDMVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEELRCLFLHCVQCAVQDDDIFGATIRMQGAEDTHISQAIVIIHVVMEMLREDSHPIRAKNATVMPPPPDGIPTDEMEVTDLSLEAQEVLEVLLEVMGEKQVEKAVQQVERLSALMDPRRKSLNGEQLENGSAHLRKRAEEDLKAVIAQFDVQPSEPASAPAPVLNVDPVEPAPKRKKLSRLEERRGARVAAASGVGASGSVQAQGSATNRRVLIERDVLVYLAEKEQVDVDEFKVLGSWSRRGTDSVCATTGQVTSPTEMPYLAFIARLYLGIEALGGRGDNQDTPLKERRFRYEEEVLVVNMDTQKEGNQRSKNGGRKLYFDKP-DVGEPRWGERNSLNVEEVLLRERYRSGGWLGLHCESSLNMFLMVLLLWEEVFDDRVHAALPHVITARNMKHAGKDKFFCSRREGLSIRLRTISRSSDEQLWLDVGQRYDRFP-KQQVWCDRAWRYY-----------LDNDRASKRRRF----------GFPDVVLWRPKSDKGAAESRSGGGSGSG----DEKGLHWGSKTHFGLGWEGYGQGWEV--VEVKSKDDTTSHAQKAWLMELENARVPAIVTRVLAEKEA 1009
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Match: A0A6H5KLH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH2_9PHAE) HSP 1 Score: 269 bits (688), Expect = 1.450e-74 Identity = 220/565 (38.94%), Postives = 267/565 (47.26%), Query Frame = 3 Query: 726 SVIDLSDKEERSVRVQLPAEPGRLPAS-------TVTAPNPSQYQLTSAAEAVQRRPWGTNPPQRRPRQQENDFAAAAFTLQQGEWGRGGEKVAKASAPVPASTHLPLGEGGKSCVGQN---QQQHDQPPFVVVGLIGEFGDRVLLLPTTRERRHAMRALPGAAVPLTWPDAGGAIRTAALTRTKAKPIVCNPLPMLATLLAWMREFSPEALPEVRCPLLPGGL-SPRQPSCS-----------GSRPPCSXXXXXXXXXDAG-------------------------------------SELSLAAAWLLAHLTFGRENYAEPQSVFARASLPPNGKVNLSGGEAAALALLRCPRIGWSPRPEEVMEALSEGEGSLCAYSVFPSEFDVEV--QIQGNMVADAAGXXXXXXXXXXXXKDGGWGSEAREAAAELVRTGLARTSGFGGMLALAPKMEETCELILKIFLGSSSDLGRETMALCALGYLATGPMTMGVYPPAVPGLLEAAQDAQQRAKERCDIARARPDGIGGQEWDTRGQTAGI---GRMRGLVGGLCVKLHQWCLEV 2228
S+ L+D +VR LPA T P S + S +VQRR WG Q+R + ++ A+ L GGE A AS V L G S Q QQ+ Q PFV+VG +GEFGDRVLLLP TRERR AM A G +VPLTW D+ G RT +L +TKAKP VCNPL MLATLLAWMREFSP LPE P+LP L +P Q S S GS+ S ++G +ELS AAWLLAH+ FGR + + Q V + A +P G++ L+GGEAAAL+LL CP IGW PRPE+VMEALSEG GSL AYS+ PSEFDV V ++ G V DGG G A+ A ELVR G AR G+L L P+M PMT + PPA+P +L AQ A+ A + R R + Q G+ GRM GLVG LCVKLH WC +V
Sbjct: 26 SIGGLTDDTATTVRTTTITSAKALPACKEIHHQYTHRQPRVSPREPASVV-SVQRREWGKLTRQQRQQIKQALPPVVAYKLHLQP--AGGEAAATASTQV-------LPSRGCSLEYQRWLRQQEQQQRPFVIVGTVGEFGDRVLLLPATRERRQAMAAGSGTSVPLTWTDSKGFKRTTSLIQTKAKPKVCNPLLMLATLLAWMREFSPGVLPESNRPVLPKALLAPDQASSSAATSALQSNNNGSK---SNIRSNSSGNNSGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKEKFETELSPGAAWLLAHMMFGRGSGGQQQRVSSYAQVPHKGEIGLNGGEAAALSLLSCPLIGWCPRPEDVMEALSEGGGSLRAYSISPSEFDVGVADKVWGQEVTPDIPTVKDLGVEQERQADGG-GGRAQAAVDELVRVGYARKRAVLGLLTLTPEM---------------------------------APMTRRMSPPAMP-ILWGAQQARNIAAT-SGVCRGR---------SSENQGFGVQPDGRMSGLVGDLCVKLHLWCYKV 532
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Match: A0A7S0ZBA2_9RHOD (Fanconi-associated nuclease n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBA2_9RHOD) HSP 1 Score: 82.0 bits (201), Expect = 8.680e-12 Identity = 64/241 (26.56%), Postives = 99/241 (41.08%), Query Frame = 3 Query: 3048 KNALNVEQVLLRERYLSGGWLGLHCESSLIMFLVMLLLWEEIFDPQVKAALPHCSMTRPVDLLDKYFFVRRQG-LPRRLLGIYRSSDEELWSDLDLRYERYKGVTAAWCDWKRFPKQQVMEISVAIGGRRLSELLRTTTSNIPYLRCGFPDVVLWRPKSHERSAPRACGSGVGRNGNIADETELAWNSRTHFGLGWQGHGFGWEVEVVEVKSKGDITSDVQKAWLMELQNARVSAMVARVL 3767
+ + VE++ L+ Y GW+G+HCE +++ L LL+W+ IF V P+DL D F+ RR+ + +L + + E+ E ++ V W V I+ IGGR L+ + R + Y GFPD+ +W+P S ++ N+A VEVK D SD Q+AW+ EL SA V RV+
Sbjct: 601 EQVVGVEELCLQS-YGQQGWIGVHCEGTMVTSLFGLLMWDIIFCDSVDIVFQTSVQDAPLDLGDPQFYKRREASIDAQLNRLALLTVAEIALCTKQSLEDHEQVQCRGVSWSLIESVDVCYIAGCIGGRSLAHMFRLLCLDYDYWSGGFPDLTMWKPASDSSAS------------NLA--------------------------MFVEVKGPRDQLSDRQRAWMHELLAVGCSAEVCRVV 802
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Match: A0A383V904_TETOB (Fanconi-associated nuclease n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V904_TETOB) HSP 1 Score: 79.7 bits (195), Expect = 5.510e-11 Identity = 97/351 (27.64%), Postives = 148/351 (42.17%), Query Frame = 3 Query: 2547 LGVISSVVEGLQKQKMYGQAVTLLRLLVRRDQGLAGQGYAEAAPDLVWAADWVTSNYRGYAYARLAVNLKHLKQPGRRQLEVARDACED----------DGVRGGERVELRERHRKLQKDHGDSQDSPAKEQQYRAIEHTVVVHMETQKEGNRKSKSGGRKLYFNKPADHGKQRWGEKNALNVEQVLLRERYLS---GGWLGLHCESSLIMFLVMLLLWEEIFDPQVKAALPHCSMTRPVDLLDKYFF-VRRQGLPRRLLGIYRSSDEELWSDLDLRYERYKGVTAAWCDWKRFPKQQVMEISVAIGGRRLSELLRTTTSNIPYLRCGFPDVVLWRP-----KSHERSAPR 3542
LG ++ V L+KQK +G+AV LLRLL+ + +A +G DW + RLA+NL+H + + LE + D VR G+R+ L+ R +L K P + ++ E G + + G K F +G + + L + Y S GGW GLHCE + L LLLW+ IF V L P+DL + F+ RR L R+L I +D E + L + + G +W+RF + +++I +GG L+ +LR + G PD++LWRP K+ E PR
Sbjct: 802 LGTVA--VSLLEKQKRWGEAVELLRLLLGGNGCVARRG------------DW---------WERLAINLEH-QGLAEQALEAVESSLADAWAXXXXXXXXXVRWGDRLGLQRRLLRLAK-------PPRRWRRPAWAPQAEWEPPEVAITGRPLNCTVGLKSRF----------YGLDGSQVTVEALALQHYASAEGGGWQGLHCEGGVWATLFGLLLWDVIF-ASVPDVLRSPFQVAPLDLGSECFYSARRDALDRQLSRI---ADGEAGAILSATWAAHSGQMCRGVNWQRFEQALLLDIVECVGGLGLAAVLRLMAEDHSGAAGGLPDLLLWRPADRCAKAVEVKGPR 1107 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig102.215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 7 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig102.215.1 >prot_H-canaliculatus_F_contig102.215.1 ID=prot_H-canaliculatus_F_contig102.215.1|Name=mRNA_H-canaliculatus_F_contig102.215.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1215bp MMAAPTTDRTGCWRERRQEAQAQARRERAARSDQRSRDIFRGISHLKARVback to top mRNA from alignment at H-canaliculatus_F_contig102:357..35596+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig102.215.1 ID=mRNA_H-canaliculatus_F_contig102.215.1|Name=mRNA_H-canaliculatus_F_contig102.215.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=35240bp|location=Sequence derived from alignment at H-canaliculatus_F_contig102:357..35596+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig102:357..35596+ >mRNA_H-canaliculatus_F_contig102.215.1 ID=mRNA_H-canaliculatus_F_contig102.215.1|Name=mRNA_H-canaliculatus_F_contig102.215.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=7290bp|location=Sequence derived from alignment at H-canaliculatus_F_contig102:357..35596+ (Hapterophycus canaliculatus Oshoro5f female)back to top |